Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:42682698-43402836

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp975 7 42660108 to 42692718 32610 - protein coding gene zinc finger protein 975
Tssr72122 7 42692747 to 42692773 26 - TSS region transcription start site region 72122
Gm38998 7 42692855 to 42697790 4935 + lncRNA gene predicted gene, 38998
Gm17067 7 42705037 to 42715367 10330 - protein coding gene predicted gene 17067
Tssr72123 7 42711485 to 42711491 6 - TSS region transcription start site region 72123
Gm18128 7 42734409 to 42734916 507 + pseudogene predicted gene, 18128
Tssr72124 7 42735647 to 42735652 5 - TSS region transcription start site region 72124
Tssr72125 7 42738987 to 42738993 6 - TSS region transcription start site region 72125
Cpgi18927 7 42749975 to 42750147 172 CpG island CpG island 18927
Gm6004 7 42750414 to 42751858 1444 + pseudogene predicted gene 6004
Vmn2r62 7 42764438 to 42793496 29058 - protein coding gene vomeronasal 2, receptor 62
D7Mit118a 7 42769706 to 42769848 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 118a
Gm2381 7 42816829 to 42867234 50405 - protein coding gene predicted gene 2381
Tssr72126 7 42867217 to 42867253 36 - TSS region transcription start site region 72126
Cpgi18928 7 42878164 to 42878395 231 CpG island CpG island 18928
Gm7211 7 42878596 to 42880005 1409 + pseudogene predicted gene 7211
Gm46024 7 42885994 to 42892563 6569 + pseudogene predicted gene, 46024
Vmn2r63 7 42903251 to 42933789 30538 - protein coding gene vomeronasal 2, receptor 63
Gm9266 7 42951724 to 42952207 483 + pseudogene predicted gene 9266
Gm9294 7 42953600 to 42954388 788 - pseudogene predicted pseudogene 9294
Tssr72127 7 42954403 to 42954414 11 - TSS region transcription start site region 72127
Gm23256 7 42958351 to 42958460 109 + miRNA gene predicted gene, 23256
Tssr72128 7 42980862 to 42980866 4 - TSS region transcription start site region 72128
Vmn2r126 7 43018798 to 43048106 29308 + protein coding gene vomeronasal 2, receptor 126
D7Mit118b 7 43042698 to 43042836 138 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 118b
Gm44538 7 43060666 to 43061013 347 - pseudogene predicted gene 44538
Tssr65974 7 43078031 to 43078040 9 + TSS region transcription start site region 65974
Gm17768 7 43078051 to 43096419 18368 + lincRNA gene predicted gene, 17768
Tssr65975 7 43078052 to 43078067 15 + TSS region transcription start site region 65975
Rpl18a-ps4 7 43082123 to 43082658 535 - pseudogene ribosomal protein L18A, pseudogene 4
Tssr65976 7 43091596 to 43091601 5 + TSS region transcription start site region 65976
Gm10351 7 43099719 to 43099843 124 + protein coding gene predicted gene 10351
Gm46011 7 43153158 to 43155410 2252 + protein coding gene predicted gene, 46011
Gm18208 7 43155806 to 43156653 847 + pseudogene predicted gene, 18208
Tssr65977 7 43177575 to 43177609 34 + TSS region transcription start site region 65977
Zfp936 7 43177588 to 43192109 14521 + protein coding gene zinc finger protein 936
Gm22707 7 43204352 to 43204461 109 + miRNA gene predicted gene, 22707
Tssr65978 7 43214019 to 43214053 34 + TSS region transcription start site region 65978
EU599041 7 43214039 to 43226842 12803 + lincRNA gene expressed sequence EU599041
Tssr65979 7 43221765 to 43221768 3 + TSS region transcription start site region 65979
Tssr65980 7 43253739 to 43253773 34 + TSS region transcription start site region 65980
Gm35588 7 43253741 to 43265645 11904 + protein coding gene predicted gene, 35588
Tssr65981 7 43267668 to 43267682 14 + TSS region transcription start site region 65981
Cpgi18929 7 43283195 to 43283404 209 CpG island CpG island 18929
Zfp715 7 43296522 to 43313309 16787 - protein coding gene zinc finger protein 715
Tssr72129 7 43310750 to 43310751 1 - TSS region transcription start site region 72129
Cpgi18930 7 43312524 to 43313437 913 CpG island CpG island 18930
Tssr72130 7 43313096 to 43313116 20 - TSS region transcription start site region 72130
Tssr72131 7 43313233 to 43313285 52 - TSS region transcription start site region 72131
Gm44539 7 43344550 to 43344787 237 + pseudogene predicted gene 44539
Siglecf 7 43351341 to 43359475 8134 + protein coding gene sialic acid binding Ig-like lectin F
Tssr65982 7 43351378 to 43351412 34 + TSS region transcription start site region 65982
Tssr65983 7 43351418 to 43351456 38 + TSS region transcription start site region 65983
Tssr2208 7 43376817 to 43376822 5 - TSS region transcription start site region 2208
Gm10298 7 43387680 to 43387944 264 - pseudogene predicted gene 10298
Gm44540 7 43394535 to 43395264 729 + pseudogene predicted gene 44540
Tssr72132 7 43399514 to 43399523 9 - TSS region transcription start site region 72132