Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:42117575-43167609

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r60 7 42116471 to 42195776 79305 + protein coding gene vomeronasal 2, receptor 60
Gm2308 7 42125200 to 42126203 1003 - pseudogene predicted gene 2308
Gm44519 7 42256295 to 42256416 121 - pseudogene predicted gene 44519
Vmn2r61 7 42260053 to 42300755 40702 + protein coding gene vomeronasal 2, receptor 61
Tssr65972 7 42271096 to 42271098 2 + TSS region transcription start site region 65972
Vmn2r-ps58 7 42303086 to 42303327 241 + pseudogene vomeronasal 2, receptor, pseudogene 58
Gm5594 7 42353709 to 42357972 4263 - pseudogene predicted gene 5594
Vmn2r-ps59 7 42378458 to 42378592 134 + pseudogene vomeronasal 2, receptor, pseudogene 59
Vmn2r-ps60 7 42430105 to 42430369 264 - pseudogene vomeronasal 2, receptor, pseudogene 60
Tssr2207 7 42430650 to 42430652 2 - TSS region transcription start site region 2207
4933421I07Rik 7 42445462 to 42448120 2658 - protein coding gene RIKEN cDNA 4933421I07 gene
Tssr72117 7 42448079 to 42448112 33 - TSS region transcription start site region 72117
Gm6887 7 42464888 to 42465369 481 - pseudogene predicted gene 6887
Zfp141 7 42473386 to 42505740 32354 - protein coding gene zinc finger protein 141
9130413E14Rik 7 42481306 to 42482335 1029 unclassified gene RIKEN cDNA 9130413E14 gene
Tssr65973 7 42488766 to 42488775 9 + TSS region transcription start site region 65973
Gm19246 7 42488801 to 42489055 254 + pseudogene predicted gene, 19246
Cpgi18926 7 42505215 to 42505843 628 CpG island CpG island 18926
Tssr72118 7 42505695 to 42505736 41 - TSS region transcription start site region 72118
Tssr72119 7 42505741 to 42505758 17 - TSS region transcription start site region 72119
Gm35353 7 42505827 to 42510268 4441 + lncRNA gene predicted gene, 35353
Gm44523 7 42507600 to 42509334 1734 - pseudogene predicted gene 44523
Gm45980 7 42518231 to 42521922 3691 - pseudogene predicted gene, 45980
Tssr72120 7 42548587 to 42548588 1 - TSS region transcription start site region 72120
Gm44997 7 42561414 to 42578235 16821 - unclassified non-coding RNA gene predicted gene 44997
Gm21028 7 42578466 to 42578588 122 - pseudogene predicted gene, 21028
Zfp977 7 42579783 to 42592547 12764 - protein coding gene zinc finger protein 977
Gm24938 7 42605156 to 42605265 109 - miRNA gene predicted gene, 24938
Zfp976 7 42609526 to 42642588 33062 - protein coding gene zinc finger protein 976
Tssr72121 7 42642575 to 42642609 34 - TSS region transcription start site region 72121
Zfp975 7 42660108 to 42692718 32610 - protein coding gene zinc finger protein 975
Tssr72122 7 42692747 to 42692773 26 - TSS region transcription start site region 72122
Gm38998 7 42692855 to 42697790 4935 + lncRNA gene predicted gene, 38998
Gm17067 7 42705037 to 42715367 10330 - protein coding gene predicted gene 17067
Tssr72123 7 42711485 to 42711491 6 - TSS region transcription start site region 72123
Gm18128 7 42734409 to 42734916 507 + pseudogene predicted gene, 18128
Tssr72124 7 42735647 to 42735652 5 - TSS region transcription start site region 72124
Tssr72125 7 42738987 to 42738993 6 - TSS region transcription start site region 72125
Cpgi18927 7 42749975 to 42750147 172 CpG island CpG island 18927
Gm6004 7 42750414 to 42751858 1444 + pseudogene predicted gene 6004
Vmn2r62 7 42764438 to 42793496 29058 - protein coding gene vomeronasal 2, receptor 62
D7Mit118a 7 42769706 to 42769848 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 118a
Gm2381 7 42816829 to 42867234 50405 - protein coding gene predicted gene 2381
Tssr72126 7 42867217 to 42867253 36 - TSS region transcription start site region 72126
Cpgi18928 7 42878164 to 42878395 231 CpG island CpG island 18928
Gm7211 7 42878596 to 42880005 1409 + pseudogene predicted gene 7211
Gm46024 7 42885994 to 42892563 6569 + pseudogene predicted gene, 46024
Vmn2r63 7 42903251 to 42933789 30538 - protein coding gene vomeronasal 2, receptor 63
Gm9266 7 42951724 to 42952207 483 + pseudogene predicted gene 9266
Gm9294 7 42953600 to 42954388 788 - pseudogene predicted pseudogene 9294
Tssr72127 7 42954403 to 42954414 11 - TSS region transcription start site region 72127
Gm23256 7 42958351 to 42958460 109 + miRNA gene predicted gene, 23256
Tssr72128 7 42980862 to 42980866 4 - TSS region transcription start site region 72128
Vmn2r126 7 43018798 to 43048106 29308 + protein coding gene vomeronasal 2, receptor 126
D7Mit118b 7 43042698 to 43042836 138 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 118b
Gm44538 7 43060666 to 43061013 347 - pseudogene predicted gene 44538
Tssr65974 7 43078031 to 43078040 9 + TSS region transcription start site region 65974
Gm17768 7 43078051 to 43096419 18368 + lincRNA gene predicted gene, 17768
Tssr65975 7 43078052 to 43078067 15 + TSS region transcription start site region 65975
Rpl18a-ps4 7 43082123 to 43082658 535 - pseudogene ribosomal protein L18A, pseudogene 4
Tssr65976 7 43091596 to 43091601 5 + TSS region transcription start site region 65976
Gm10351 7 43099719 to 43099843 124 + protein coding gene predicted gene 10351
Gm46011 7 43153158 to 43155410 2252 + protein coding gene predicted gene, 46011
Gm18208 7 43155806 to 43156653 847 + pseudogene predicted gene, 18208