Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:4167710-4507736

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr2071 7 4170937 to 4170941 4 + TSS region transcription start site region 2071
Gm5319 7 4176363 to 4177235 872 - pseudogene predicted gene 5319
Gm44807 7 4177367 to 4177520 153 + pseudogene predicted gene 44807
Gm15926 7 4207832 to 4208668 836 + pseudogene predicted gene 15926
Tssr64324 7 4237699 to 4237712 13 + TSS region transcription start site region 64324
Lilra5 7 4237754 to 4243463 5709 + protein coding gene leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
Gm15923 7 4259064 to 4259515 451 + pseudogene predicted gene 15923
Tssr64325 7 4274155 to 4274163 8 + TSS region transcription start site region 64325
Gm15931 7 4274189 to 4282645 8456 + pseudogene predicted gene 15931
Gm44881 7 4301348 to 4301714 366 + pseudogene predicted gene 44881
Tssr64326 7 4337710 to 4337736 26 + TSS region transcription start site region 64326
Ncr1 7 4337724 to 4345164 7440 + protein coding gene natural cytotoxicity triggering receptor 1
Gm45013 7 4359599 to 4359776 177 + pseudogene predicted gene 45013
Gp6 7 4363965 to 4397744 33779 - protein coding gene glycoprotein 6 (platelet)
Gm25349 7 4388452 to 4388561 109 - miRNA gene predicted gene, 25349
Gm24752 7 4393011 to 4393120 109 - miRNA gene predicted gene, 24752
Tssr70459 7 4397705 to 4397728 23 - TSS region transcription start site region 70459
Tssr64327 7 4412321 to 4412330 9 + TSS region transcription start site region 64327
Atp6v0c-ps1 7 4412438 to 4412900 462 + pseudogene ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 1
Rdh13 7 4425665 to 4445846 20181 - protein coding gene retinol dehydrogenase 13 (all-trans and 9-cis)
Tssr70460 7 4426797 to 4426801 4 - TSS region transcription start site region 70460
Gm24605 7 4441920 to 4442015 95 - miRNA gene predicted gene, 24605
Tssr70461 7 4445205 to 4445243 38 - TSS region transcription start site region 70461
Cpgi18230 7 4445235 to 4445785 550 CpG island CpG island 18230
Tssr70462 7 4445568 to 4445575 7 - TSS region transcription start site region 70462
Tssr70463 7 4445595 to 4445631 36 - TSS region transcription start site region 70463
Tssr70464 7 4445637 to 4445662 25 - TSS region transcription start site region 70464
Gm15494 7 4445697 to 4471285 25588 - antisense lncRNA gene predicted gene 15494
Eps8l1 7 4460674 to 4480487 19813 + protein coding gene EPS8-like 1
Tssr64328 7 4460687 to 4460730 43 + TSS region transcription start site region 64328
Tssr64329 7 4460738 to 4460749 11 + TSS region transcription start site region 64329
Tssr70465 7 4461252 to 4461269 17 - TSS region transcription start site region 70465
Tssr2072 7 4464731 to 4464747 16 + TSS region transcription start site region 2072
Tssr64330 7 4465329 to 4465375 46 + TSS region transcription start site region 64330
D630041G03Rik 7 4467245 to 4470884 3639 - lncRNA gene RIKEN cDNA D630041G03 gene
Cpgi18231 7 4470188 to 4470462 274 CpG island CpG island 18231
Cpgi18232 7 4471176 to 4471490 314 CpG island CpG island 18232
Tssr70466 7 4471228 to 4471290 62 - TSS region transcription start site region 70466
Cpgi18233 7 4478083 to 4478280 197 CpG island CpG island 18233
Cpgi18234 7 4478561 to 4479072 511 CpG island CpG island 18234
Tssr64331 7 4480685 to 4480718 33 + TSS region transcription start site region 64331
Tssr64332 7 4480778 to 4480789 11 + TSS region transcription start site region 64332
Ppp1r12c 7 4481520 to 4501680 20160 - protein coding gene protein phosphatase 1, regulatory subunit 12C
Tssr70467 7 4500802 to 4500807 5 - TSS region transcription start site region 70467
Tssr70468 7 4500837 to 4500854 17 - TSS region transcription start site region 70468
Cpgi18235 7 4500860 to 4502238 1378 CpG island CpG island 18235
Tssr64333 7 4500921 to 4500929 8 + TSS region transcription start site region 64333
Tssr70469 7 4501614 to 4501634 20 - TSS region transcription start site region 70469
Tssr70470 7 4501636 to 4501711 75 - TSS region transcription start site region 70470
Tssr70471 7 4501715 to 4501722 7 - TSS region transcription start site region 70471
Tssr70472 7 4502200 to 4502240 40 - TSS region transcription start site region 70472
Tnnt1 7 4504569 to 4516000 11431 - protein coding gene troponin T1, skeletal, slow
Cpgi18236 7 4507692 to 4508764 1072 CpG island CpG island 18236
Eih4 7 132998156 to 4235946 -128762210 QTL ethanol induced hypothermia 4