Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:41620200-42631203

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2610021A01Rik 7 41599230 to 41628533 29303 + protein coding gene RIKEN cDNA 2610021A01 gene
Tssr65970 7 41622799 to 41622805 6 + TSS region transcription start site region 65970
Cpgi18923 7 41632852 to 41633134 282 CpG island CpG island 18923
Zfp788 7 41633203 to 41651530 18327 + protein coding gene zinc finger protein 788
Cpgi18924 7 41633386 to 41633783 397 CpG island CpG island 18924
Tssr65971 7 41633545 to 41633603 58 + TSS region transcription start site region 65971
Gm9252 7 41666517 to 41668118 1601 - pseudogene predicted gene 9252
Vmn2r-ps54 7 41668014 to 41727193 59179 + pseudogene vomeronasal 2, receptor, pseudogene 54
Gm6872 7 41668608 to 41669307 699 - pseudogene predicted gene 6872
Cd9-ps 7 41682658 to 41683307 649 - pseudogene Cd9 antigen, pseudogene
Tssr72116 7 41682994 to 41683004 10 - TSS region transcription start site region 72116
Vmn2r-ps55 7 41722288 to 41722527 239 + pseudogene vomeronasal 2, receptor, pseudogene 55
Cpgi18925 7 41740028 to 41740298 270 CpG island CpG island 18925
Vmn2r-ps56 7 41744737 to 41772910 28173 - pseudogene vomeronasal 2, receptor, pseudogene 56
D7Dcr11 7 41759984 to 41760092 108 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 11
Vmn2r58 7 41836881 to 41872670 35789 - protein coding gene vomeronasal 2, receptor 58
Vmn2r-ps57 7 41937560 to 41980928 43368 - pseudogene vomeronasal 2, receptor, pseudogene 57
Vmn2r59 7 42011792 to 42058981 47189 - protein coding gene vomeronasal 2, receptor 59
Hmgb1-ps7 7 42020836 to 42021483 647 + pseudogene high-mobility group high mobility group box 1, pseudogene 7
Gm7224 7 42047948 to 42050212 2264 - pseudogene predicted gene 7224
Ccnb1-ps 7 42105899 to 42107185 1286 - pseudogene cyclin B1, pseudogene
Vmn2r60 7 42116471 to 42195776 79305 + protein coding gene vomeronasal 2, receptor 60
Gm2308 7 42125200 to 42126203 1003 - pseudogene predicted gene 2308
Gm44519 7 42256295 to 42256416 121 - pseudogene predicted gene 44519
Vmn2r61 7 42260053 to 42300755 40702 + protein coding gene vomeronasal 2, receptor 61
Tssr65972 7 42271096 to 42271098 2 + TSS region transcription start site region 65972
Vmn2r-ps58 7 42303086 to 42303327 241 + pseudogene vomeronasal 2, receptor, pseudogene 58
Gm5594 7 42353709 to 42357972 4263 - pseudogene predicted gene 5594
Vmn2r-ps59 7 42378458 to 42378592 134 + pseudogene vomeronasal 2, receptor, pseudogene 59
Vmn2r-ps60 7 42430105 to 42430369 264 - pseudogene vomeronasal 2, receptor, pseudogene 60
Tssr2207 7 42430650 to 42430652 2 - TSS region transcription start site region 2207
4933421I07Rik 7 42445462 to 42448120 2658 - protein coding gene RIKEN cDNA 4933421I07 gene
Tssr72117 7 42448079 to 42448112 33 - TSS region transcription start site region 72117
Gm6887 7 42464888 to 42465369 481 - pseudogene predicted gene 6887
Zfp141 7 42473386 to 42505740 32354 - protein coding gene zinc finger protein 141
9130413E14Rik 7 42481306 to 42482335 1029 unclassified gene RIKEN cDNA 9130413E14 gene
Tssr65973 7 42488766 to 42488775 9 + TSS region transcription start site region 65973
Gm19246 7 42488801 to 42489055 254 + pseudogene predicted gene, 19246
Cpgi18926 7 42505215 to 42505843 628 CpG island CpG island 18926
Tssr72118 7 42505695 to 42505736 41 - TSS region transcription start site region 72118
Tssr72119 7 42505741 to 42505758 17 - TSS region transcription start site region 72119
Gm35353 7 42505827 to 42510268 4441 + lncRNA gene predicted gene, 35353
Gm44523 7 42507600 to 42509334 1734 - pseudogene predicted gene 44523
Gm45980 7 42518231 to 42521922 3691 - pseudogene predicted gene, 45980
Tssr72120 7 42548587 to 42548588 1 - TSS region transcription start site region 72120
Gm44997 7 42561414 to 42578235 16821 - unclassified non-coding RNA gene predicted gene 44997
Gm21028 7 42578466 to 42578588 122 - pseudogene predicted gene, 21028
Zfp977 7 42579783 to 42592547 12764 - protein coding gene zinc finger protein 977
Gm24938 7 42605156 to 42605265 109 - miRNA gene predicted gene, 24938
Zfp976 7 42609526 to 42642588 33062 - protein coding gene zinc finger protein 976