Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:40369734-40979744

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28807 7 40373302 to 40469240 95938 - lincRNA gene predicted gene 28807
Pdcc1 7 40417107 to 40417107 0 QTL plasmacytoid dentritic cell compartment 1
4921507H08Rik 7 40473159 to 40474890 1731 unclassified gene RIKEN cDNA 4921507H08 gene
Tssr72109 7 40535039 to 40535042 3 - TSS region transcription start site region 72109
Tssr2206 7 40541085 to 40541087 2 - TSS region transcription start site region 2206
Tssr72110 7 40636454 to 40636457 3 - TSS region transcription start site region 72110
Tssr65957 7 40674734 to 40674744 10 + TSS region transcription start site region 65957
4933402C06Rik 7 40674737 to 40691260 16523 + lincRNA gene RIKEN cDNA 4933402C06 gene
Gm45008 7 40820618 to 40821110 492 - unclassified gene predicted gene 45008
A230077H06Rik 7 40849153 to 40898324 49171 - antisense lncRNA gene RIKEN cDNA A230077H06 gene
Gm28307 7 40876543 to 40885785 9242 + lincRNA gene predicted gene 28307
Gm25784 7 40879658 to 40879738 80 + snRNA gene predicted gene, 25784
Tssr65958 7 40893672 to 40893686 14 + TSS region transcription start site region 65958
Cpgi18917 7 40898089 to 40900465 2376 CpG island CpG island 18917
Tssr65959 7 40898184 to 40898213 29 + TSS region transcription start site region 65959
Vstm2b 7 40898342 to 40929972 31630 + protein coding gene V-set and transmembrane domain containing 2B
Tssr72111 7 40898604 to 40898619 15 - TSS region transcription start site region 72111
Tssr65960 7 40898747 to 40898778 31 + TSS region transcription start site region 65960
Tssr65961 7 40898783 to 40898819 36 + TSS region transcription start site region 65961
Tssr65962 7 40898932 to 40898943 11 + TSS region transcription start site region 65962
Tssr65963 7 40898947 to 40898960 13 + TSS region transcription start site region 65963
Cpgi18918 7 40901266 to 40901577 311 CpG island CpG island 18918
Cpgi18919 7 40902309 to 40902993 684 CpG island CpG island 18919
Tssr65964 7 40902618 to 40902637 19 + TSS region transcription start site region 65964
Gm29293 7 40969919 to 40974538 4619 + pseudogene predicted gene 29293