Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:39551852-40511978

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prnr2 7 18994869 to 40024609 21029740 QTL prion resistance 2
Gm33989 7 39542062 to 39580590 38528 + protein coding gene predicted gene, 33989
Gm37494 7 39544402 to 39580589 36187 + lincRNA gene predicted gene, 37494
Cpgi18915 7 39552200 to 39552987 787 CpG island CpG island 18915
Tssr65953 7 39552474 to 39552512 38 + TSS region transcription start site region 65953
Gm4790 7 39552608 to 39570555 17947 protein coding gene predicted gene 4790
Tssr65954 7 39552816 to 39552840 24 + TSS region transcription start site region 65954
6230415J03Rik 7 39574444 to 39576230 1786 unclassified gene RIKEN cDNA 6230415J03 gene
Gm17983 7 39583165 to 39583742 577 - pseudogene predicted gene, 17983
Cpgi18916 7 39588328 to 39589163 835 CpG island CpG island 18916
Tssr65955 7 39588512 to 39588524 12 + TSS region transcription start site region 65955
Gm26526 7 39588518 to 39591679 3161 - lincRNA gene predicted gene, 26526
Tssr65956 7 39588525 to 39588545 20 + TSS region transcription start site region 65956
Gm2058 7 39588931 to 39589717 786 + pseudogene predicted gene 2058
Gm26327 7 39630392 to 39630502 110 + snRNA gene predicted gene, 26327
Gm2021 7 39662546 to 39663009 463 - pseudogene predicted gene 2021
Gm9230 7 39739998 to 39740529 531 - pseudogene predicted gene 9230
Gm45839 7 39788086 to 39797686 9600 - lincRNA gene predicted gene 45839
4930435C17Rik 7 39789235 to 39910970 121735 - lincRNA gene RIKEN cDNA 4930435C17 gene
4930558N11Rik 7 39790967 to 39797742 6775 - lincRNA gene RIKEN cDNA 4930558N11 gene
Gm37302 7 39791254 to 39794251 2997 + unclassified gene predicted gene, 37302
Tssr72104 7 39797720 to 39797738 18 - TSS region transcription start site region 72104
Tssr72105 7 39797740 to 39797746 6 - TSS region transcription start site region 72105
Tssr72106 7 39797765 to 39797768 3 - TSS region transcription start site region 72106
Gm34052 7 39863526 to 39870691 7165 + lncRNA gene predicted gene, 34052
Gm44992 7 39869131 to 39978319 109188 - lincRNA gene predicted gene 44992
Tssr72107 7 39910944 to 39910952 8 - TSS region transcription start site region 72107
Tssr72108 7 39910964 to 39910975 11 - TSS region transcription start site region 72108
D7Dcr9 7 40024460 to 40024609 149 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 9
D7Mit228 7 40024463 to 40024609 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 228
Litsq2 7 40024463 to 40024609 146 QTL litter size QTL 2
D7Mit228.2 7 40024587 to 40024698 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 228.2
D7Mit270 7 40031842 to 40031986 144 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 270
D7Dcr10 7 40031852 to 40031978 126 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 10
D7Mit52 7 40072199 to 40072361 162 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 52
Gm38199 7 40077405 to 40080681 3276 - unclassified gene predicted gene, 38199
Gm6851 7 40190937 to 40191331 394 + pseudogene predicted pseudogene 6851
D7Mit80 7 40239148 to 40239292 144 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 80
Bdt4 7 40239148 to 40239292 144 QTL bone density traits 4
4933404I11Rik 7 40262705 to 40269753 7048 + lincRNA gene RIKEN cDNA 4933404I11 gene
Gm38996 7 40295866 to 40303819 7953 + lncRNA gene predicted gene, 38996
Gm24910 7 40363450 to 40363721 271 + unclassified non-coding RNA gene predicted gene, 24910
Gm28807 7 40373302 to 40469240 95938 - lincRNA gene predicted gene 28807
Pdcc1 7 40417107 to 40417107 0 QTL plasmacytoid dentritic cell compartment 1
4921507H08Rik 7 40473159 to 40474890 1731 unclassified gene RIKEN cDNA 4921507H08 gene
Abbp3 7 103860803 to 40024463 -63836340 QTL A/J and C57BL/6 blood pressure 3