Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3831105-4131118

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pira2 7 3836812 to 3845051 8239 - protein coding gene paired-Ig-like receptor A2
Gm10693 7 3860681 to 3869170 8489 - pseudogene predicted pseudogene 10693
Gm14548 7 3884242 to 3898120 13878 - protein coding gene predicted gene 14548
Tssr70431 7 3898129 to 3898142 13 - TSS region transcription start site region 70431
Lilra6 7 3908280 to 3915503 7223 - protein coding gene leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
Gm44581 7 3928853 to 3932849 3996 - lincRNA gene predicted gene 44581
Gm44580 7 3933518 to 3934394 876 - pseudogene predicted gene 44580
Gm3189 7 3956240 to 3957071 831 - pseudogene predicted gene 3189
Tssr64298 7 3981105 to 3981118 13 + TSS region transcription start site region 64298
Tssr64299 7 3981131 to 3981134 3 + TSS region transcription start site region 64299
Tssr64300 7 3981140 to 3981147 7 + TSS region transcription start site region 64300
1700095K22Rik 7 3981150 to 3982877 1727 + lincRNA gene RIKEN cDNA 1700095K22 gene
Tssr64301 7 3981153 to 3981160 7 + TSS region transcription start site region 64301
Tssr2069 7 3981809 to 3981813 4 + TSS region transcription start site region 2069
Gm7363 7 3983787 to 3984185 398 - pseudogene predicted gene 7363
Tssr70432 7 3984206 to 3984218 12 - TSS region transcription start site region 70432
Gm15928 7 3993239 to 3993518 279 - pseudogene predicted gene 15928
Tssr70433 7 3993719 to 3993722 3 - TSS region transcription start site region 70433
Lair1 7 4003402 to 4063204 59802 - protein coding gene leukocyte-associated Ig-like receptor 1
Tssr70434 7 4008008 to 4008026 18 - TSS region transcription start site region 70434
Tssr70435 7 4008106 to 4008117 11 - TSS region transcription start site region 70435
Tssr70436 7 4008351 to 4008372 21 - TSS region transcription start site region 70436
Tssr70437 7 4008376 to 4008393 17 - TSS region transcription start site region 70437
Tssr70438 7 4009513 to 4009524 11 - TSS region transcription start site region 70438
Tssr70439 7 4024507 to 4024534 27 - TSS region transcription start site region 70439
Tssr70440 7 4028788 to 4028798 10 - TSS region transcription start site region 70440
Tssr70441 7 4062683 to 4062688 5 - TSS region transcription start site region 70441
Tssr70442 7 4063126 to 4063139 13 - TSS region transcription start site region 70442
Tssr70443 7 4063155 to 4063188 33 - TSS region transcription start site region 70443
Tssr70444 7 4063195 to 4063210 15 - TSS region transcription start site region 70444
9430041J12Rik 7 4074125 to 4120728 46603 - antisense lncRNA gene RIKEN cDNA 9430041J12 gene
Gm23741 7 4101890 to 4102060 170 + snRNA gene predicted gene, 23741
Cpgi18225 7 4119341 to 4120024 683 CpG island CpG island 18225
Tssr64302 7 4119525 to 4119555 30 + TSS region transcription start site region 64302
Ttyh1 7 4119526 to 4135407 15881 + protein coding gene tweety family member 1
Tssr64303 7 4119556 to 4119596 40 + TSS region transcription start site region 64303
Tssr64304 7 4119598 to 4119609 11 + TSS region transcription start site region 64304
Tssr70445 7 4120065 to 4120077 12 - TSS region transcription start site region 70445
Tssr70446 7 4120433 to 4120466 33 - TSS region transcription start site region 70446
Cpgi18226 7 4124566 to 4124723 157 CpG island CpG island 18226
D030047H15Rik 7 4126340 to 4136926 10586 - antisense lncRNA gene RIKEN cDNA D030047H15 gene
Tssr64305 7 4129175 to 4129186 11 + TSS region transcription start site region 64305
Tssr64306 7 4129265 to 4129285 20 + TSS region transcription start site region 64306
Tssr2070 7 4129296 to 4129305 9 + TSS region transcription start site region 2070
Tssr64307 7 4129321 to 4129330 9 + TSS region transcription start site region 64307
Tssr64308 7 4130799 to 4130834 35 + TSS region transcription start site region 64308