Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:38187972-38789862

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D530033B14Rik 7 38182563 to 38196457 13894 - antisense lncRNA gene RIKEN cDNA D530033B14 gene
1600014C10Rik 7 38183217 to 38197568 14351 + protein coding gene RIKEN cDNA 1600014C10 gene
Cpgi18904 7 38200821 to 38201284 463 CpG island CpG island 18904
Tssr65943 7 38212906 to 38212911 5 + TSS region transcription start site region 65943
Plekhf1 7 38220654 to 38227994 7340 - protein coding gene pleckstrin homology domain containing, family F (with FYVE domain) member 1
Cpgi18905 7 38221456 to 38221882 426 CpG island CpG island 18905
Cpgi18906 7 38227626 to 38228527 901 CpG island CpG island 18906
Tssr72095 7 38227961 to 38227972 11 - TSS region transcription start site region 72095
Tssr72096 7 38227975 to 38228000 25 - TSS region transcription start site region 72096
Pop4 7 38262812 to 38271388 8576 - protein coding gene processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
Cpgi18907 7 38271109 to 38271633 524 CpG island CpG island 18907
Tssr72097 7 38271178 to 38271219 41 - TSS region transcription start site region 72097
Tssr72098 7 38271224 to 38271245 21 - TSS region transcription start site region 72098
Tssr72099 7 38271310 to 38271390 80 - TSS region transcription start site region 72099
Tssr65944 7 38271385 to 38271418 33 + TSS region transcription start site region 65944
Gm44767 7 38271412 to 38333530 62118 + antisense lncRNA gene predicted gene 44767
Gm28581 7 38293637 to 38296985 3348 - pseudogene predicted gene 28581
Gm9220 7 38311078 to 38314859 3781 - pseudogene predicted gene 9220
Gm4451 7 38365982 to 38367872 1890 - pseudogene predicted gene 4451
Tssr65945 7 38379351 to 38379383 32 + TSS region transcription start site region 65945
Gm28453 7 38379365 to 38443215 63850 + lncRNA gene predicted gene 28453
Gm22638 7 38380349 to 38380455 106 + snRNA gene predicted gene, 22638
Gm6818 7 38399009 to 38402768 3759 - pseudogene predicted gene 6818
Gm28583 7 38428730 to 38432048 3318 - pseudogene predicted gene 28583
Gm6605 7 38446621 to 38450424 3803 - pseudogene predicted gene 6605
Gm6819 7 38487972 to 38489862 1890 - pseudogene predicted gene 6819
Gm5591 7 38518139 to 38528193 10054 - protein coding gene predicted gene 5591
Gm29087 7 38528336 to 38537304 8968 + antisense lncRNA gene predicted gene 29087
Gm4454 7 38567162 to 38570962 3800 - pseudogene predicted gene 4454
Gm20749 7 38603076 to 38606567 3491 - pseudogene predicted gene, 20749
Gm29086 7 38606659 to 38606880 221 + pseudogene predicted gene 29086
Gm25286 7 38613149 to 38613253 104 + snRNA gene predicted gene, 25286
Gm21115 7 38719956 to 38723756 3800 - pseudogene predicted gene, 21115
Gm21276 7 38763034 to 38768184 5150 - pseudogene predicted gene, 21276
Gm21122 7 38779749 to 38786072 6323 - pseudogene predicted gene, 21122
Gm29085 7 38786161 to 38786385 224 + pseudogene predicted gene 29085