Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:38140821-38261284

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30912 7 38141870 to 38144151 2281 - lncRNA gene predicted gene, 30912
Cpgi18902 7 38174208 to 38174708 500 CpG island CpG island 18902
Gm22203 7 38176614 to 38176671 57 - snRNA gene predicted gene, 22203
D530033B14Rik 7 38182563 to 38196457 13894 - antisense lncRNA gene RIKEN cDNA D530033B14 gene
Tssr65934 7 38182788 to 38182822 34 + TSS region transcription start site region 65934
Tssr65935 7 38183185 to 38183199 14 + TSS region transcription start site region 65935
1600014C10Rik 7 38183217 to 38197568 14351 + protein coding gene RIKEN cDNA 1600014C10 gene
Tssr65936 7 38183224 to 38183278 54 + TSS region transcription start site region 65936
Cpgi18903 7 38183340 to 38184221 881 CpG island CpG island 18903
Tssr65937 7 38183647 to 38183668 21 + TSS region transcription start site region 65937
Tssr65938 7 38183750 to 38183757 7 + TSS region transcription start site region 65938
Tssr65939 7 38183804 to 38183869 65 + TSS region transcription start site region 65939
Tssr65940 7 38183876 to 38183885 9 + TSS region transcription start site region 65940
Tssr72094 7 38184519 to 38184524 5 - TSS region transcription start site region 72094
Tssr65941 7 38186235 to 38186249 14 + TSS region transcription start site region 65941
Tssr65942 7 38186254 to 38186262 8 + TSS region transcription start site region 65942
Cpgi18904 7 38200821 to 38201284 463 CpG island CpG island 18904
Tssr65943 7 38212906 to 38212911 5 + TSS region transcription start site region 65943
Plekhf1 7 38220654 to 38227994 7340 - protein coding gene pleckstrin homology domain containing, family F (with FYVE domain) member 1
Cpgi18905 7 38221456 to 38221882 426 CpG island CpG island 18905
Cpgi18906 7 38227626 to 38228527 901 CpG island CpG island 18906
Tssr72095 7 38227961 to 38227972 11 - TSS region transcription start site region 72095
Tssr72096 7 38227975 to 38228000 25 - TSS region transcription start site region 72096