Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3645790-3697553

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi18220	7	3644854 to 3646257	1403		CpG island	CpG island 18220
Cnot3	7	3645269 to 3661109	15840	+	protein coding gene	CCR4-NOT transcription complex, subunit 3
Mir3572	7	3655962 to 3656047	85	+	miRNA gene	microRNA 3572
Tssr64283	7	3657735 to 3657740	5	+	TSS region	transcription start site region 64283
Leng1	7	3660107 to 3665840	5733	-	protein coding gene	leukocyte receptor cluster (LRC) member 1
Cpgi18221	7	3665161 to 3665783	622		CpG island	CpG island 18221
Tssr70415	7	3665444 to 3665488	44	-	TSS region	transcription start site region 70415
Tmc4	7	3665790 to 3677553	11763	-	protein coding gene	transmembrane channel-like gene family 4
Gm15929	7	3666252 to 3670278	4026	+	antisense lncRNA gene	predicted gene 15929
Tssr70416	7	3666917 to 3666941	24	-	TSS region	transcription start site region 70416
Tssr70417	7	3667190 to 3667240	50	-	TSS region	transcription start site region 70417
Cpgi18222	7	3671259 to 3671511	252		CpG island	CpG island 18222
Tssr70418	7	3677478 to 3677502	24	-	TSS region	transcription start site region 70418
Tssr70419	7	3677509 to 3677529	20	-	TSS region	transcription start site region 70419
Tssr70420	7	3677531 to 3677553	22	-	TSS region	transcription start site region 70420
Mboat7	7	3677789 to 3693523	15734	-	protein coding gene	membrane bound O-acyltransferase domain containing 7
Tssr70421	7	3685917 to 3685984	67	-	TSS region	transcription start site region 70421
Cpgi18223	7	3692399 to 3694966	2567		CpG island	CpG island 18223
Tssr70422	7	3692761 to 3692828	67	-	TSS region	transcription start site region 70422
Tssr70423	7	3692906 to 3693032	126	-	TSS region	transcription start site region 70423
Tssr70424	7	3693139 to 3693194	55	-	TSS region	transcription start site region 70424
Tsen34	7	3693436 to 3701035	7599	+	protein coding gene	tRNA splicing endonuclease subunit 34
Tssr70425	7	3693533 to 3693552	19	-	TSS region	transcription start site region 70425
Tssr70426	7	3693554 to 3693579	25	-	TSS region	transcription start site region 70426
Tssr64284	7	3693723 to 3693815	92	+	TSS region	transcription start site region 64284
Tssr64285	7	3694512 to 3694552	40	+	TSS region	transcription start site region 64285
Tssr64286	7	3694587 to 3694590	3	+	TSS region	transcription start site region 64286