Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3622735-3692740

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tfpt 7 3620324 to 3629929 9605 - protein coding gene TCF3 (E2A) fusion partner
Cpgi18218 7 3628747 to 3628999 252 CpG island CpG island 18218
Cpgi18219 7 3629469 to 3630131 662 CpG island CpG island 18219
Tssr70413 7 3629577 to 3629616 39 - TSS region transcription start site region 70413
Tssr70414 7 3629874 to 3629924 50 - TSS region transcription start site region 70414
Prpf31 7 3629985 to 3642485 12500 + protein coding gene pre-mRNA processing factor 31
Tssr64279 7 3629985 to 3630037 52 + TSS region transcription start site region 64279
Tssr64280 7 3630045 to 3630056 11 + TSS region transcription start site region 64280
Gm15927 7 3632114 to 3644887 12773 - lncRNA gene predicted gene 15927
Cpgi18220 7 3644854 to 3646257 1403 CpG island CpG island 18220
Tssr64281 7 3645267 to 3645321 54 + TSS region transcription start site region 64281
Cnot3 7 3645269 to 3661109 15840 + protein coding gene CCR4-NOT transcription complex, subunit 3
Tssr64282 7 3645509 to 3645567 58 + TSS region transcription start site region 64282
Mir3572 7 3655962 to 3656047 85 + miRNA gene microRNA 3572
Tssr64283 7 3657735 to 3657740 5 + TSS region transcription start site region 64283
Leng1 7 3660107 to 3665840 5733 - protein coding gene leukocyte receptor cluster (LRC) member 1
Cpgi18221 7 3665161 to 3665783 622 CpG island CpG island 18221
Tssr70415 7 3665444 to 3665488 44 - TSS region transcription start site region 70415
Tmc4 7 3665790 to 3677553 11763 - protein coding gene transmembrane channel-like gene family 4
Gm15929 7 3666252 to 3670278 4026 + antisense lncRNA gene predicted gene 15929
Tssr70416 7 3666917 to 3666941 24 - TSS region transcription start site region 70416
Tssr70417 7 3667190 to 3667240 50 - TSS region transcription start site region 70417
Cpgi18222 7 3671259 to 3671511 252 CpG island CpG island 18222
Tssr70418 7 3677478 to 3677502 24 - TSS region transcription start site region 70418
Tssr70419 7 3677509 to 3677529 20 - TSS region transcription start site region 70419
Tssr70420 7 3677531 to 3677553 22 - TSS region transcription start site region 70420
Mboat7 7 3677789 to 3693523 15734 - protein coding gene membrane bound O-acyltransferase domain containing 7
Tssr70421 7 3685917 to 3685984 67 - TSS region transcription start site region 70421
Cpgi18223 7 3692399 to 3694966 2567 CpG island CpG island 18223