Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:36180590-36980679

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46016 7 36171304 to 36189215 17911 + lncRNA gene predicted gene, 46016
Tssr65915 7 36234216 to 36234225 9 + TSS region transcription start site region 65915
Gm9211 7 36234292 to 36235266 974 + pseudogene predicted gene 9211
D7Mit54 7 36284587 to 36284815 228 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 54
Gm23292 7 36302515 to 36302615 100 + miRNA gene predicted gene, 23292
Spmo1 7 36425154 to 36425322 168 QTL sperm mobility 1
D7Mit309 7 36425154 to 36425322 168 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 309
D7Dcr8 7 36425160 to 36425330 170 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 8
Gm25247 7 36430611 to 36430700 89 + miRNA gene predicted gene, 25247
Gm38992 7 36538521 to 36543017 4496 - lncRNA gene predicted gene, 38992
Gm29129 7 36568743 to 36573095 4352 + lincRNA gene predicted gene 29129
Rigs1 7 36580590 to 92745138 56164548 QTL radiation induced gastroschisis 1
D7Mit227 7 36580590 to 36580679 89 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 227
Eae12 7 36580590 to 36580679 89 QTL experimental allergic encephalomyelitis susceptibility 12
jrc 7 36580679 to 4627246 -31953433 heritable phenotypic marker juvenile recessive cataract
Gm36420 7 36597142 to 36603864 6722 - lncRNA gene predicted gene, 36420
Gm38993 7 36626487 to 36649175 22688 - lncRNA gene predicted gene, 38993
Gm36722 7 36652543 to 36697277 44734 - lncRNA gene predicted gene, 36722
Cpgi18881 7 36660419 to 36660706 287 CpG island CpG island 18881
Cpgi18882 7 36679995 to 36680166 171 CpG island CpG island 18882
Tssr72062 7 36687767 to 36687771 4 - TSS region transcription start site region 72062
Cpgi18883 7 36694298 to 36694518 220 CpG island CpG island 18883
Cpgi18884 7 36695177 to 36698886 3709 CpG island CpG island 18884
Gm38285 7 36695438 to 36696359 921 + unclassified gene predicted gene, 38285
Tssr72063 7 36696070 to 36696074 4 - TSS region transcription start site region 72063
Tssr65916 7 36696626 to 36696678 52 + TSS region transcription start site region 65916
Tssr65917 7 36698002 to 36698059 57 + TSS region transcription start site region 65917
Tshz3 7 36698118 to 36773553 75435 + protein coding gene teashirt zinc finger family member 3
Tssr65918 7 36698212 to 36698244 32 + TSS region transcription start site region 65918
Tssr65919 7 36700636 to 36700642 6 + TSS region transcription start site region 65919
Gm37452 7 36710174 to 36711333 1159 + unclassified gene predicted gene, 37452
Tssr65920 7 36711897 to 36711902 5 + TSS region transcription start site region 65920
Gm38340 7 36721846 to 36725853 4007 + unclassified gene predicted gene, 38340
E230020A03Rik 7 36727177 to 36729562 2385 + unclassified gene RIKEN cDNA E230020A03 gene
Tssr2204 7 36729442 to 36729447 5 + TSS region transcription start site region 2204
Tssr65921 7 36729487 to 36729498 11 + TSS region transcription start site region 65921
Gm37827 7 36733017 to 36734558 1541 + unclassified gene predicted gene, 37827
Tssr65922 7 36739857 to 36739859 2 + TSS region transcription start site region 65922
Gm24550 7 36751195 to 36751473 278 - unclassified non-coding RNA gene predicted gene, 24550
Cpgi18885 7 36770380 to 36771370 990 CpG island CpG island 18885
Tssr65923 7 36773143 to 36773151 8 + TSS region transcription start site region 65923
Tssr2205 7 36832766 to 36832770 4 + TSS region transcription start site region 2205
D7Ertd312e 7 36850889 to 36851102 213 DNA segment DNA segment, Chr 7, ERATO Doi 312, expressed
Gm36656 7 36914162 to 36917400 3238 + lncRNA gene predicted gene, 36656
Gm36567 7 36918995 to 36922188 3193 - lncRNA gene predicted gene, 36567
Gm36464 7 36936106 to 36961464 25358 + lncRNA gene predicted gene, 36464
Bbaa16 7 116817642 to 36580590 -80237052 QTL B.burgdorferi-associated arthritis 16