Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:35179477-35359680

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18861 7 35184994 to 35186795 1801 CpG island CpG island 18861
Tssr65893 7 35186358 to 35186369 11 + TSS region transcription start site region 65893
Tssr65894 7 35186370 to 35186408 38 + TSS region transcription start site region 65894
Slc7a10 7 35186385 to 35201114 14729 + protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
Tssr65895 7 35186409 to 35186432 23 + TSS region transcription start site region 65895
Lrp3 7 35200878 to 35215493 14615 - protein coding gene low density lipoprotein receptor-related protein 3
Cpgi18862 7 35203248 to 35204418 1170 CpG island CpG island 18862
Cpgi18863 7 35214450 to 35216157 1707 CpG island CpG island 18863
Tssr72027 7 35215248 to 35215413 165 - TSS region transcription start site region 72027
Gm24505 7 35217235 to 35217360 125 + snoRNA gene predicted gene, 24505
Gm38989 7 35232385 to 35234814 2429 - lncRNA gene predicted gene, 38989
Cpgi18864 7 35234559 to 35235152 593 CpG island CpG island 18864
n-TTagt9 7 35234770 to 35234843 73 - tRNA gene nuclear encoded tRNA threonine 9 (anticodon AGT)
Wdr88 7 35236136 to 35276494 40358 - protein coding gene WD repeat domain 88
Cpgi18865 7 35267214 to 35267448 234 CpG island CpG island 18865
Cpgi18866 7 35269477 to 35269680 203 CpG island CpG island 18866
Cpgi18867 7 35274937 to 35275226 289 CpG island CpG island 18867
Cpgi18868 7 35275516 to 35275673 157 CpG island CpG island 18868
Tssr72028 7 35275530 to 35275544 14 - TSS region transcription start site region 72028
Tssr72029 7 35275546 to 35275560 14 - TSS region transcription start site region 72029
Gpatch1 7 35276544 to 35318440 41896 - protein coding gene G patch domain containing 1
Gm44636 7 35282493 to 35283247 754 + unclassified gene predicted gene 44636
Cpgi18869 7 35318067 to 35318604 537 CpG island CpG island 18869
Tssr72030 7 35318408 to 35318437 29 - TSS region transcription start site region 72030
Cpgi18870 7 35333458 to 35335329 1871 CpG island CpG island 18870
Tssr2202 7 35333786 to 35333819 33 - TSS region transcription start site region 2202
Rhpn2 7 35334180 to 35392287 58107 + protein coding gene rhophilin, Rho GTPase binding protein 2
Tssr65896 7 35334306 to 35334331 25 + TSS region transcription start site region 65896
D7Mit225 7 35337417 to 35337517 100 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 225
Tssr65897 7 35353525 to 35353542 17 + TSS region transcription start site region 65897
Tssr65898 7 35353543 to 35353554 11 + TSS region transcription start site region 65898