Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:35100878-35315493

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm22535	7	35101822 to 35101940	118	+	rRNA gene	predicted gene, 22535
Cpgi18860	7	35117839 to 35120866	3027		CpG island	CpG island 18860
Gm45091	7	35118044 to 35119605	1561	-	antisense lncRNA gene	predicted gene 45091
Tssr65889	7	35119285 to 35119301	16	+	TSS region	transcription start site region 65889
Cebpa	7	35119293 to 35121928	2635	+	protein coding gene	CCAAT/enhancer binding protein (C/EBP), alpha
Tssr2200	7	35119331 to 35119335	4	+	TSS region	transcription start site region 2200
Tssr65890	7	35119594 to 35119618	24	+	TSS region	transcription start site region 65890
Tssr65891	7	35119625 to 35119650	25	+	TSS region	transcription start site region 65891
Tssr65892	7	35120006 to 35120022	16	+	TSS region	transcription start site region 65892
Tssr72025	7	35121924 to 35121928	4	-	TSS region	transcription start site region 72025
Tssr2201	7	35127911 to 35127937	26	-	TSS region	transcription start site region 2201
Gm35724	7	35128897 to 35142427	13530	+	lncRNA gene	predicted gene, 35724
Gm35665	7	35135046 to 35141449	6403	-	lincRNA gene	predicted gene, 35665
Gm35889	7	35152557 to 35158264	5707	-	lncRNA gene	predicted gene, 35889
Gm38988	7	35163337 to 35173793	10456	-	lncRNA gene	predicted gene, 38988
Tssr72026	7	35178290 to 35178292	2	-	TSS region	transcription start site region 72026
Cpgi18861	7	35184994 to 35186795	1801		CpG island	CpG island 18861
Tssr65893	7	35186358 to 35186369	11	+	TSS region	transcription start site region 65893
Tssr65894	7	35186370 to 35186408	38	+	TSS region	transcription start site region 65894
Slc7a10	7	35186385 to 35201114	14729	+	protein coding gene	solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
Tssr65895	7	35186409 to 35186432	23	+	TSS region	transcription start site region 65895
Lrp3	7	35200878 to 35215493	14615	-	protein coding gene	low density lipoprotein receptor-related protein 3
Cpgi18862	7	35203248 to 35204418	1170		CpG island	CpG island 18862
Cpgi18863	7	35214450 to 35216157	1707		CpG island	CpG island 18863
Tssr72027	7	35215248 to 35215413	165	-	TSS region	transcription start site region 72027
Gm24505	7	35217235 to 35217360	125	+	snoRNA gene	predicted gene, 24505
Gm38989	7	35232385 to 35234814	2429	-	lncRNA gene	predicted gene, 38989
Cpgi18864	7	35234559 to 35235152	593		CpG island	CpG island 18864
n-TTagt9	7	35234770 to 35234843	73	-	tRNA gene	nuclear encoded tRNA threonine 9 (anticodon AGT)
Wdr88	7	35236136 to 35276494	40358	-	protein coding gene	WD repeat domain 88
Cpgi18865	7	35267214 to 35267448	234		CpG island	CpG island 18865
Cpgi18866	7	35269477 to 35269680	203		CpG island	CpG island 18866
Cpgi18867	7	35274937 to 35275226	289		CpG island	CpG island 18867
Cpgi18868	7	35275516 to 35275673	157		CpG island	CpG island 18868
Tssr72028	7	35275530 to 35275544	14	-	TSS region	transcription start site region 72028
Tssr72029	7	35275546 to 35275560	14	-	TSS region	transcription start site region 72029
Gpatch1	7	35276544 to 35318440	41896	-	protein coding gene	G patch domain containing 1
Gm44636	7	35282493 to 35283247	754	+	unclassified gene	predicted gene 44636