Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:34990589-35122043

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pepd 7 34912407 to 35044708 132301 + protein coding gene peptidase D
Gm35484 7 35021050 to 35029209 8159 - lncRNA gene predicted gene, 35484
Tssr72019 7 35029300 to 35029308 8 - TSS region transcription start site region 72019
Tssr65887 7 35040504 to 35040516 12 + TSS region transcription start site region 65887
Cebpg 7 35046422 to 35056566 10144 - protein coding gene CCAAT/enhancer binding protein (C/EBP), gamma
Tssr72020 7 35049545 to 35049570 25 - TSS region transcription start site region 72020
Gm44836 7 35051398 to 35052537 1139 - sense intronic lncRNA gene predicted gene 44836
Gm45094 7 35052975 to 35053591 616 - unclassified gene predicted gene 45094
Cpgi18859 7 35055589 to 35057043 1454 CpG island CpG island 18859
Gm45095 7 35056027 to 35056379 352 + antisense lncRNA gene predicted gene 45095
Tssr72021 7 35056419 to 35056428 9 - TSS region transcription start site region 72021
Tssr72022 7 35056467 to 35056556 89 - TSS region transcription start site region 72022
Tssr72023 7 35056562 to 35056586 24 - TSS region transcription start site region 72023
Tssr65888 7 35056752 to 35056759 7 + TSS region transcription start site region 65888
Gm45096 7 35057264 to 35066733 9469 - lincRNA gene predicted gene 45096
Tssr72024 7 35067824 to 35067830 6 - TSS region transcription start site region 72024
D7Mit269 7 35070229 to 35070331 102 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 269
Gm25033 7 35081910 to 35081979 69 + miRNA gene predicted gene, 25033
Gm35611 7 35086836 to 35090842 4006 + lincRNA gene predicted gene, 35611
Gm22535 7 35101822 to 35101940 118 + rRNA gene predicted gene, 22535
Cpgi18860 7 35117839 to 35120866 3027 CpG island CpG island 18860
Gm45091 7 35118044 to 35119605 1561 - antisense lncRNA gene predicted gene 45091
Tssr65889 7 35119285 to 35119301 16 + TSS region transcription start site region 65889
Cebpa 7 35119293 to 35121928 2635 + protein coding gene CCAAT/enhancer binding protein (C/EBP), alpha
Tssr2200 7 35119331 to 35119335 4 + TSS region transcription start site region 2200
Tssr65890 7 35119594 to 35119618 24 + TSS region transcription start site region 65890
Tssr65891 7 35119625 to 35119650 25 + TSS region transcription start site region 65891
Tssr65892 7 35120006 to 35120022 16 + TSS region transcription start site region 65892
Tssr72025 7 35121924 to 35121928 4 - TSS region transcription start site region 72025