Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:34812407-35144708

46 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chst8	7	34674468 to 34812711	138243	-	protein coding gene	carbohydrate sulfotransferase 8
Cpgi18856	7	34811527 to 34813354	1827		CpG island	CpG island 18856
Tssr72017	7	34812677 to 34812693	16	-	TSS region	transcription start site region 72017
Gm38987	7	34812993 to 34844179	31186	+	lncRNA gene	predicted gene, 38987
Cpgi18857	7	34819796 to 34820177	381		CpG island	CpG island 18857
D7Ertd1e	7	34854727 to 34854962	235		DNA segment	DNA segment, Chr 7, ERATO Doi 1, expressed
Tssr2199	7	34881585 to 34881589	4	-	TSS region	transcription start site region 2199
Cpgi18858	7	34912243 to 34912880	637		CpG island	CpG island 18858
Tssr65885	7	34912400 to 34912415	15	+	TSS region	transcription start site region 65885
Pepd	7	34912407 to 35044708	132301	+	protein coding gene	peptidase D
Prt5	7	34912407 to 46742980	11830573		heritable phenotypic marker	protease 5
Gm25922	7	34943856 to 34943985	129	-	snoRNA gene	predicted gene, 25922
Tssr72018	7	34952985 to 34952994	9	-	TSS region	transcription start site region 72018
Tssr65886	7	34969335 to 34969372	37	+	TSS region	transcription start site region 65886
Gm35534	7	34983346 to 34990113	6767	-	lncRNA gene	predicted gene, 35534
Gm35484	7	35021050 to 35029209	8159	-	lncRNA gene	predicted gene, 35484
Tssr72019	7	35029300 to 35029308	8	-	TSS region	transcription start site region 72019
Tssr65887	7	35040504 to 35040516	12	+	TSS region	transcription start site region 65887
Cebpg	7	35046422 to 35056566	10144	-	protein coding gene	CCAAT/enhancer binding protein (C/EBP), gamma
Tssr72020	7	35049545 to 35049570	25	-	TSS region	transcription start site region 72020
Gm44836	7	35051398 to 35052537	1139	-	sense intronic lncRNA gene	predicted gene 44836
Gm45094	7	35052975 to 35053591	616	-	unclassified gene	predicted gene 45094
Cpgi18859	7	35055589 to 35057043	1454		CpG island	CpG island 18859
Gm45095	7	35056027 to 35056379	352	+	antisense lncRNA gene	predicted gene 45095
Tssr72021	7	35056419 to 35056428	9	-	TSS region	transcription start site region 72021
Tssr72022	7	35056467 to 35056556	89	-	TSS region	transcription start site region 72022
Tssr72023	7	35056562 to 35056586	24	-	TSS region	transcription start site region 72023
Tssr65888	7	35056752 to 35056759	7	+	TSS region	transcription start site region 65888
Gm45096	7	35057264 to 35066733	9469	-	lincRNA gene	predicted gene 45096
Tssr72024	7	35067824 to 35067830	6	-	TSS region	transcription start site region 72024
D7Mit269	7	35070229 to 35070331	102		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 269
Gm25033	7	35081910 to 35081979	69	+	miRNA gene	predicted gene, 25033
Gm35611	7	35086836 to 35090842	4006	+	lincRNA gene	predicted gene, 35611
Gm22535	7	35101822 to 35101940	118	+	rRNA gene	predicted gene, 22535
Cpgi18860	7	35117839 to 35120866	3027		CpG island	CpG island 18860
Gm45091	7	35118044 to 35119605	1561	-	antisense lncRNA gene	predicted gene 45091
Tssr65889	7	35119285 to 35119301	16	+	TSS region	transcription start site region 65889
Cebpa	7	35119293 to 35121928	2635	+	protein coding gene	CCAAT/enhancer binding protein (C/EBP), alpha
Tssr2200	7	35119331 to 35119335	4	+	TSS region	transcription start site region 2200
Tssr65890	7	35119594 to 35119618	24	+	TSS region	transcription start site region 65890
Tssr65891	7	35119625 to 35119650	25	+	TSS region	transcription start site region 65891
Tssr65892	7	35120006 to 35120022	16	+	TSS region	transcription start site region 65892
Tssr72025	7	35121924 to 35121928	4	-	TSS region	transcription start site region 72025
Tssr2201	7	35127911 to 35127937	26	-	TSS region	transcription start site region 2201
Gm35724	7	35128897 to 35142427	13530	+	lncRNA gene	predicted gene, 35724
Gm35665	7	35135046 to 35141449	6403	-	lincRNA gene	predicted gene, 35665