Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:34572677-35052693

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18850 7 34606071 to 34606325 254 CpG island CpG island 18850
Gm35378 7 34629434 to 34631558 2124 + lncRNA gene predicted gene, 35378
Cpgi18851 7 34630484 to 34630985 501 CpG island CpG island 18851
Gm44837 7 34636996 to 34637712 716 - lincRNA gene predicted gene 44837
Kctd15 7 34639015 to 34655509 16494 - protein coding gene potassium channel tetramerisation domain containing 15
D7Ertd351e 7 34643926 to 34644148 222 DNA segment DNA segment, Chr 7, ERATO Doi 351, expressed
Cpgi18852 7 34652780 to 34655930 3150 CpG island CpG island 18852
Tssr72014 7 34654342 to 34654393 51 - TSS region transcription start site region 72014
Tssr65881 7 34655277 to 34655301 24 + TSS region transcription start site region 65881
Tssr72015 7 34655500 to 34655515 15 - TSS region transcription start site region 72015
Gm12781 7 34655570 to 34661202 5632 + antisense lncRNA gene predicted gene 12781
Tssr65882 7 34659958 to 34659969 11 + TSS region transcription start site region 65882
Tssr65883 7 34659970 to 34660004 34 + TSS region transcription start site region 65883
Gm12756 7 34665413 to 34673999 8586 - lincRNA gene predicted gene 12756
Chst8 7 34674468 to 34812711 138243 - protein coding gene carbohydrate sulfotransferase 8
Cpgi18853 7 34675081 to 34676233 1152 CpG island CpG island 18853
Cpgi18854 7 34693962 to 34694227 265 CpG island CpG island 18854
Tssr2198 7 34725059 to 34725060 1 + TSS region transcription start site region 2198
Tssr65884 7 34743946 to 34743950 4 + TSS region transcription start site region 65884
Tssr72016 7 34748289 to 34748294 5 - TSS region transcription start site region 72016
Cpgi18855 7 34753129 to 34753567 438 CpG island CpG island 18855
D7Mit156 7 34801081 to 34801224 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 156
Cpgi18856 7 34811527 to 34813354 1827 CpG island CpG island 18856
Tssr72017 7 34812677 to 34812693 16 - TSS region transcription start site region 72017
Gm38987 7 34812993 to 34844179 31186 + lncRNA gene predicted gene, 38987
Cpgi18857 7 34819796 to 34820177 381 CpG island CpG island 18857
D7Ertd1e 7 34854727 to 34854962 235 DNA segment DNA segment, Chr 7, ERATO Doi 1, expressed
Tssr2199 7 34881585 to 34881589 4 - TSS region transcription start site region 2199
Cpgi18858 7 34912243 to 34912880 637 CpG island CpG island 18858
Tssr65885 7 34912400 to 34912415 15 + TSS region transcription start site region 65885
Prt5 7 34912407 to 46742980 11830573 heritable phenotypic marker protease 5
Pepd 7 34912407 to 35044708 132301 + protein coding gene peptidase D
Gm25922 7 34943856 to 34943985 129 - snoRNA gene predicted gene, 25922
Tssr72018 7 34952985 to 34952994 9 - TSS region transcription start site region 72018
Tssr65886 7 34969335 to 34969372 37 + TSS region transcription start site region 65886
Gm35534 7 34983346 to 34990113 6767 - lncRNA gene predicted gene, 35534
Gm35484 7 35021050 to 35029209 8159 - lncRNA gene predicted gene, 35484
Tssr72019 7 35029300 to 35029308 8 - TSS region transcription start site region 72019
Tssr65887 7 35040504 to 35040516 12 + TSS region transcription start site region 65887
Cebpg 7 35046422 to 35056566 10144 - protein coding gene CCAAT/enhancer binding protein (C/EBP), gamma
Tssr72020 7 35049545 to 35049570 25 - TSS region transcription start site region 72020
Gm44836 7 35051398 to 35052537 1139 - sense intronic lncRNA gene predicted gene 44836