Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:34178665-34604779

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12783 7 34176758 to 34180004 3246 + pseudogene predicted gene 12783
Pdcd2l 7 34184499 to 34196661 12162 - protein coding gene programmed cell death 2-like
Tssr71978 7 34189483 to 34189492 9 - TSS region transcription start site region 71978
Tssr71979 7 34189494 to 34189524 30 - TSS region transcription start site region 71979
Tssr71980 7 34192138 to 34192149 11 - TSS region transcription start site region 71980
Cpgi18843 7 34196048 to 34196841 793 CpG island CpG island 18843
Tssr71981 7 34196139 to 34196157 18 - TSS region transcription start site region 71981
Tssr71982 7 34196178 to 34196192 14 - TSS region transcription start site region 71982
Tssr71983 7 34196641 to 34196675 34 - TSS region transcription start site region 71983
Gpi1 7 34201330 to 34230336 29006 - protein coding gene glucose phosphate isomerase 1
Lar 7 34201330 to 34230336 29006 QTL low antibody response
Tssr71984 7 34207940 to 34207944 4 - TSS region transcription start site region 71984
Tssr71985 7 34209882 to 34209921 39 - TSS region transcription start site region 71985
Tssr71986 7 34213432 to 34213448 16 - TSS region transcription start site region 71986
Tssr71987 7 34213450 to 34213470 20 - TSS region transcription start site region 71987
Tssr71988 7 34221663 to 34221688 25 - TSS region transcription start site region 71988
Tssr71989 7 34223743 to 34223755 12 - TSS region transcription start site region 71989
Gm26762 7 34224755 to 34230236 5481 + lincRNA gene predicted gene, 26762
Tssr71990 7 34229415 to 34229436 21 - TSS region transcription start site region 71990
Tssr71991 7 34229445 to 34229461 16 - TSS region transcription start site region 71991
Cpgi18844 7 34229816 to 34230546 730 CpG island CpG island 18844
Tssr71992 7 34230253 to 34230276 23 - TSS region transcription start site region 71992
Tssr71993 7 34230284 to 34230308 24 - TSS region transcription start site region 71993
Tssr71994 7 34230313 to 34230324 11 - TSS region transcription start site region 71994
Tssr71995 7 34230426 to 34230450 24 - TSS region transcription start site region 71995
Gm12762 7 34231182 to 34233991 2809 - lincRNA gene predicted gene 12762
Gm12758 7 34233293 to 34236732 3439 + antisense lncRNA gene predicted gene 12758
Cpgi18845 7 34233722 to 34234905 1183 CpG island CpG island 18845
Tssr71996 7 34233990 to 34234017 27 - TSS region transcription start site region 71996
Tssr71997 7 34234067 to 34234099 32 - TSS region transcription start site region 71997
Tssr71998 7 34234559 to 34234566 7 - TSS region transcription start site region 71998
4931406P16Rik 7 34236707 to 34313551 76844 - protein coding gene RIKEN cDNA 4931406P16 gene
Tssr71999 7 34242333 to 34242358 25 - TSS region transcription start site region 71999
BC060293 7 34250252 to 34251355 1103 - unclassified gene cDNA sequence BC060293
Gm6096 7 34251038 to 34251493 455 + protein coding gene predicted gene 6096
Tssr72000 7 34292087 to 34292091 4 - TSS region transcription start site region 72000
Tssr72001 7 34305486 to 34305497 11 - TSS region transcription start site region 72001
Tssr72002 7 34305518 to 34305543 25 - TSS region transcription start site region 72002
Cpgi18846 7 34312715 to 34313852 1137 CpG island CpG island 18846
Tssr65878 7 34313018 to 34313026 8 + TSS region transcription start site region 65878
Tssr72003 7 34313489 to 34313500 11 - TSS region transcription start site region 72003
Tssr72004 7 34313508 to 34313528 20 - TSS region transcription start site region 72004
Tssr72005 7 34313531 to 34313568 37 - TSS region transcription start site region 72005
Lsm14a 7 34344637 to 34389637 45000 - protein coding gene LSM14A mRNA processing body assembly factor
Tssr72006 7 34357805 to 34357822 17 - TSS region transcription start site region 72006
Tssr72007 7 34360622 to 34360623 1 - TSS region transcription start site region 72007
Gm44567 7 34362701 to 34365331 2630 - unclassified gene predicted gene 44567
Gm12774 7 34383659 to 34384074 415 + pseudogene predicted gene 12774
Tssr72008 7 34385243 to 34385252 9 - TSS region transcription start site region 72008
Cpgi18847 7 34388580 to 34390232 1652 CpG island CpG island 18847
Tssr65879 7 34388604 to 34388671 67 + TSS region transcription start site region 65879
Gm12764 7 34388665 to 34394779 6114 + antisense lncRNA gene predicted gene 12764
Tssr72009 7 34389461 to 34389473 12 - TSS region transcription start site region 72009
Tssr72010 7 34389575 to 34389638 63 - TSS region transcription start site region 72010
Tssr72011 7 34389684 to 34389695 11 - TSS region transcription start site region 72011
Tssr72012 7 34389699 to 34389720 21 - TSS region transcription start site region 72012
2310043P16Rik 7 34389732 to 34393612 3880 + unclassified gene RIKEN cDNA 2310043P16 gene
Tssr65880 7 34389747 to 34389803 56 + TSS region transcription start site region 65880
Cpgi18848 7 34411021 to 34411288 267 CpG island CpG island 18848
D7Mit79 7 34422737 to 34422848 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 79
Gm12766 7 34438137 to 34520885 82748 + lincRNA gene predicted gene 12766
Gm12780 7 34495421 to 34496065 644 - pseudogene predicted gene 12780
Gm31709 7 34501027 to 34501407 380 - pseudogene predicted gene, 31709
Gm35297 7 34522341 to 34547064 24723 - lncRNA gene predicted gene, 35297
Tssr72013 7 34546783 to 34546798 15 - TSS region transcription start site region 72013
Gm12784 7 34547206 to 34560149 12943 + lincRNA gene predicted gene 12784
Cpgi18849 7 34570174 to 34571083 909 CpG island CpG island 18849