Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3331098-3451115

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkcg 7 3303532 to 3331099 27567 + protein coding gene protein kinase C, gamma
Cpgi18206 7 3331901 to 3332125 224 CpG island CpG island 18206
Tssr64248 7 3331998 to 3332076 78 + TSS region transcription start site region 64248
Tssr64249 7 3332134 to 3332168 34 + TSS region transcription start site region 64249
Tssr64250 7 3332172 to 3332210 38 + TSS region transcription start site region 64250
Cpgi18207 7 3332784 to 3333510 726 CpG island CpG island 18207
Tssr64251 7 3332789 to 3332837 48 + TSS region transcription start site region 64251
Tssr64252 7 3332918 to 3332950 32 + TSS region transcription start site region 64252
Cacng7 7 3332955 to 3368221 35266 + protein coding gene calcium channel, voltage-dependent, gamma subunit 7
Cpgi18208 7 3336563 to 3336773 210 CpG island CpG island 18208
Gm44256 7 3337545 to 3337879 334 + unclassified gene predicted gene, 44256
Tssr64253 7 3338814 to 3338842 28 + TSS region transcription start site region 64253
Cpgi18209 7 3338960 to 3339210 250 CpG island CpG island 18209
Tssr64254 7 3365957 to 3365971 14 + TSS region transcription start site region 64254
Tssr64255 7 3366176 to 3366188 12 + TSS region transcription start site region 64255
Tssr64256 7 3366193 to 3366213 20 + TSS region transcription start site region 64256
Cpgi18210 7 3366609 to 3367060 451 CpG island CpG island 18210
Tssr64257 7 3366877 to 3366891 14 + TSS region transcription start site region 64257
Tssr64258 7 3366940 to 3366997 57 + TSS region transcription start site region 64258
Tssr64259 7 3367380 to 3367402 22 + TSS region transcription start site region 64259
Tssr64260 7 3367410 to 3367425 15 + TSS region transcription start site region 64260
Gm9567 7 3378120 to 3390079 11959 unclassified gene predicted gene 9567
Gm44257 7 3378121 to 3390080 11959 - lincRNA gene predicted gene, 44257
Cpgi18211 7 3387913 to 3388368 455 CpG island CpG island 18211
Tssr64261 7 3390181 to 3390231 50 + TSS region transcription start site region 64261
Tssr64262 7 3390316 to 3390337 21 + TSS region transcription start site region 64262
Tssr64263 7 3390469 to 3390479 10 + TSS region transcription start site region 64263
Tssr64264 7 3390629 to 3390707 78 + TSS region transcription start site region 64264
Tssr64265 7 3390785 to 3390861 76 + TSS region transcription start site region 64265
Tssr64266 7 3390879 to 3390899 20 + TSS region transcription start site region 64266
Tssr64267 7 3390909 to 3390920 11 + TSS region transcription start site region 64267
Tssr64268 7 3391019 to 3391040 21 + TSS region transcription start site region 64268
Tssr64269 7 3391098 to 3391115 17 + TSS region transcription start site region 64269
Gm44151 7 3391596 to 3400926 9330 - antisense lncRNA gene predicted gene, 44151
Cacng8 7 3394042 to 3415605 21563 + protein coding gene calcium channel, voltage-dependent, gamma subunit 8
Cpgi18212 7 3411103 to 3411450 347 CpG island CpG island 18212
Tssr64270 7 3411472 to 3411515 43 + TSS region transcription start site region 64270
Cpgi18213 7 3411925 to 3412359 434 CpG island CpG island 18213
Cpgi18214 7 3414649 to 3414994 345 CpG island CpG island 18214
Gm23450 7 3415066 to 3415156 90 + miRNA gene predicted gene, 23450
3300002P13Rik 7 3421665 to 3423445 1780 - lincRNA gene RIKEN cDNA 3300002P13 gene
Cpgi18215 7 3423519 to 3423810 291 CpG island CpG island 18215
Tssr64271 7 3423589 to 3423594 5 + TSS region transcription start site region 64271
Tssr64272 7 3423600 to 3423611 11 + TSS region transcription start site region 64272
Tssr64273 7 3423612 to 3423654 42 + TSS region transcription start site region 64273
Cacng6 7 3424195 to 3435667 11472 + protein coding gene calcium channel, voltage-dependent, gamma subunit 6