Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:33138461-34172731

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28559 7 33164974 to 33165112 138 - pseudogene predicted gene 28559
Gm6003 7 33165208 to 33165670 462 + pseudogene predicted gene 6003
Scgb2b18 7 33171892 to 33173861 1969 - protein coding gene secretoglobin, family 2B, member 18
Scgb1b18 7 33185568 to 33186868 1300 + protein coding gene secretoglobin, family 1B, member 18
Scgb2b19 7 33278370 to 33280338 1968 - protein coding gene secretoglobin, family 2B, member 19
Scgb1b19 7 33287307 to 33288491 1184 + protein coding gene secretoglobin, family 1B, member 19
Gm9167 7 33312140 to 33313101 961 + pseudogene predicted gene 9167
Scgb2b20 7 33364343 to 33366319 1976 - protein coding gene secretoglobin, family 2B, member 20
Scgb1b20 7 33373234 to 33374559 1325 + protein coding gene secretoglobin, family 1B, member 20
Gm5732 7 33402819 to 33403825 1006 + pseudogene predicted gene 5732
Gm28794 7 33423439 to 33423574 135 - pseudogene predicted gene 28794
Gm5731 7 33423670 to 33424150 480 + pseudogene predicted gene 5731
Scgb1b34-ps 7 33443029 to 33444811 1782 - pseudogene secretoglobin, family 1B, member 34, pseudogene
Scgb2b21 7 33518488 to 33520455 1967 - protein coding gene secretoglobin, family 2B, member 21
Tssr2195 7 33527357 to 33527360 3 + TSS region transcription start site region 2195
Scgb1b21 7 33527376 to 33528558 1182 + protein coding gene secretoglobin, family 1B, member 21
Gm12770 7 33567253 to 33567714 461 - pseudogene predicted gene 12770
Gm12771 7 33568156 to 33568290 134 + pseudogene predicted gene 12771
Scgb2b22-ps 7 33604264 to 33606052 1788 - pseudogene secretoglobin, family 2B, member 22, pseudogene
Tssr2196 7 33606064 to 33606074 10 - TSS region transcription start site region 2196
Scgb1b22-ps 7 33614622 to 33615807 1185 + pseudogene secretoglobin, family 1B, member 22, pseudogene
Scgb2b23-ps 7 33625145 to 33653281 28136 - pseudogene secretoglobin, family 2B, member 23, pseudogene
Tssr65865 7 33635145 to 33635147 2 + TSS region transcription start site region 65865
Scgb1b23-ps 7 33635164 to 33635533 369 + pseudogene secretoglobin, family 1B, member 23, pseudogene
Tssr65866 7 33653453 to 33653493 40 + TSS region transcription start site region 65866
Gm12763 7 33653461 to 33657731 4270 + lincRNA gene predicted gene 12763
Rpl23a-ps12 7 33697270 to 33697737 467 + pseudogene ribosomal protein L23A, pseudogene 12
Scgb2b24 7 33737193 to 33739295 2102 - protein coding gene secretoglobin, family 2B, member 24
Tssr71961 7 33739303 to 33739322 19 - TSS region transcription start site region 71961
Tssr2197 7 33741838 to 33741843 5 + TSS region transcription start site region 2197
D7Mit308 7 33742910 to 33743025 115 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 308
D7Dcr5 7 33742913 to 33743013 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 5
Tssr65867 7 33743737 to 33743743 6 + TSS region transcription start site region 65867
Tssr65868 7 33743781 to 33743788 7 + TSS region transcription start site region 65868
Scgb1b24 7 33743799 to 33744982 1183 + protein coding gene secretoglobin, family 1B, member 24
Gm12782 7 33780829 to 33781537 708 - pseudogene predicted gene 12782
Gm28614 7 33795310 to 33796135 825 - pseudogene predicted gene 28614
D7Mit55 7 33798302 to 33798450 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 55
W3q10 7 33798302 to 58499217 24700915 QTL weight 3 weeks QTL 10
Splq7 7 33798302 to 58499217 24700915 QTL spleen weight QTL 7
W10q18 7 33798302 to 58499217 24700915 QTL weight 10 weeks QTL 18
Epfq5 7 33798302 to 58499217 24700915 QTL epididymal fat pad weight QTL 5
Lvrq6 7 33798302 to 58499217 24700915 QTL liver weight QTL 6
Kidq5 7 33798302 to 58499217 24700915 QTL kidney weight QTL 5
Tailq5 7 33798302 to 58499217 24700915 QTL tail length QTL 5
W6q17 7 33798302 to 58499217 24700915 QTL weight 6 weeks QTL 17
Gm26443 7 33808117 to 33808226 109 + miRNA gene predicted gene, 26443
Gm12768 7 33844954 to 33845682 728 + pseudogene predicted gene 12768
Scgb2b25-ps 7 33853056 to 33854818 1762 - pseudogene secretoglobin, family 2B, member 25, pseudogene
Tssr71962 7 33854835 to 33854839 4 - TSS region transcription start site region 71962
Scgb1b25-ps 7 33867925 to 33869201 1276 + pseudogene secretoglobin, family 1B, member 25, pseudogene
Gm12757 7 33879295 to 33880094 799 + pseudogene predicted gene 12757
Tssr71963 7 33901815 to 33901822 7 - TSS region transcription start site region 71963
Gm28615 7 33903280 to 33904117 837 - pseudogene predicted gene 28615
Gm12765 7 33937261 to 33938237 976 + pseudogene predicted gene 12765
Scgb2b26 7 33942997 to 33944985 1988 - protein coding gene secretoglobin, family 2B, member 26
Tssr65869 7 33943209 to 33943222 13 + TSS region transcription start site region 65869
Tssr71964 7 33944300 to 33944304 4 - TSS region transcription start site region 71964
Tssr71965 7 33944392 to 33944401 9 - TSS region transcription start site region 71965
Tssr71966 7 33944986 to 33944988 2 - TSS region transcription start site region 71966
Tssr71967 7 33944993 to 33944995 2 - TSS region transcription start site region 71967
Tssr71968 7 33945074 to 33945102 28 - TSS region transcription start site region 71968
Scgb1b26-ps 7 33958805 to 33959986 1181 + pseudogene secretoglobin, family 1B, member 26, pseudogene
Gm28184 7 33986311 to 33986377 66 + pseudogene predicted gene 28184
Gm12773 7 33997071 to 33997591 520 + pseudogene predicted gene 12773
Gm12755 7 33998012 to 34006461 8449 + pseudogene predicted gene 12755
Scgb2b27 7 34011921 to 34013942 2021 - protein coding gene secretoglobin, family 2B, member 27
Tssr71969 7 34013300 to 34013312 12 - TSS region transcription start site region 71969
Tssr71970 7 34013882 to 34013888 6 - TSS region transcription start site region 71970
Tssr71971 7 34013943 to 34013947 4 - TSS region transcription start site region 71971
Tssr71972 7 34013971 to 34013983 12 - TSS region transcription start site region 71972
Tssr65870 7 34021479 to 34021483 4 + TSS region transcription start site region 65870
Tssr65871 7 34021544 to 34021557 13 + TSS region transcription start site region 65871
Scgb1b27 7 34021567 to 34022881 1314 + protein coding gene secretoglobin, family 1B, member 27
Tssr65872 7 34021746 to 34021760 14 + TSS region transcription start site region 65872
Tssr71973 7 34022778 to 34022791 13 - TSS region transcription start site region 71973
Tssr65873 7 34022810 to 34022817 7 + TSS region transcription start site region 65873
Gm12760 7 34036447 to 34037432 985 - pseudogene predicted gene 12760
Tssr71974 7 34037470 to 34037471 1 - TSS region transcription start site region 71974
Gm12779 7 34068555 to 34068697 142 - pseudogene predicted gene 12779
Scgb1b30 7 34095431 to 34100837 5406 + protein coding gene secretoglobin, family 1B, member 30
Tssr65874 7 34095495 to 34095503 8 + TSS region transcription start site region 65874
Wtip 7 34109543 to 34133268 23725 - protein coding gene WT1-interacting protein
Cpgi18841 7 34132336 to 34133867 1531 CpG island CpG island 18841
Tssr71975 7 34133215 to 34133297 82 - TSS region transcription start site region 71975
Uba2 7 34140697 to 34168585 27888 - protein coding gene ubiquitin-like modifier activating enzyme 2
Cpgi18842 7 34167851 to 34168754 903 CpG island CpG island 18842
Tssr71976 7 34168499 to 34168510 11 - TSS region transcription start site region 71976
Tssr71977 7 34168516 to 34168582 66 - TSS region transcription start site region 71977
Tssr65875 7 34168605 to 34168628 23 + TSS region transcription start site region 65875
Tssr65876 7 34168636 to 34168648 12 + TSS region transcription start site region 65876
Tssr65877 7 34168659 to 34168676 17 + TSS region transcription start site region 65877