Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:32228271-33838733

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgb2b12 7 32325286 to 32327245 1959 - protein coding gene secretoglobin, family 2B, member 12
Scgb1b12 7 32334182 to 32335501 1319 + protein coding gene secretoglobin, family 1B, member 12
Gm9142 7 32358928 to 32359882 954 + pseudogene predicted gene 9142
Gm28862 7 32388244 to 32388406 162 - pseudogene predicted gene 28862
Rpl23a-ps11 7 32388481 to 32388943 462 + pseudogene ribosomal protein L23A, pseudogene 11
Scgb1b29 7 32441541 to 32442722 1181 + protein coding gene secretoglobin, family 1B, member 29
Gm9146 7 32473252 to 32474257 1005 + pseudogene predicted gene 9146
Gm5116 7 32495638 to 32496100 462 + pseudogene predicted gene 5116
Scgb2b13-ps 7 32507503 to 32509279 1776 - pseudogene secretoglobin, family 2B, member 13, pseudogene
Scgb1b13-ps 7 32517013 to 32517403 390 + pseudogene secretoglobin, family 1B, member 13, pseudogene
Tssr2194 7 32542950 to 32542951 1 + TSS region transcription start site region 2194
Gm5327 7 32545759 to 32546767 1008 + pseudogene predicted pseudogene 5327
Gm9149 7 32604815 to 32605821 1006 + pseudogene predicted gene 9149
Gm21135 7 32622259 to 32622694 435 + pseudogene predicted gene, 21135
Scgb2b14-ps 7 32647654 to 32649799 2145 - pseudogene secretoglobin, family 2B, member 14, pseudogene
Scgb1b14-ps 7 32656765 to 32657158 393 + pseudogene secretoglobin, family 1B, member 14, pseudogene
Gm24766 7 32690250 to 32690370 120 + miRNA gene predicted gene, 24766
Gm5058 7 32704477 to 32704939 462 - pseudogene predicted gene 5058
Gm29429 7 32705029 to 32705149 120 + pseudogene predicted gene 29429
Scgb2b31-ps 7 32745301 to 32747062 1761 - pseudogene secretoglobin, family 2B, member 31, pseudogene
Gm4398 7 32791496 to 32792487 991 + pseudogene predicted gene 4398
Gm29432 7 32806135 to 32806273 138 - pseudogene predicted gene 29432
Gm28408 7 32806369 to 32806831 462 + pseudogene predicted gene 28408
Scgb2b15 7 32827683 to 32829653 1970 - protein coding gene secretoglobin, family 2B, member 15
Scgb1b15 7 32836570 to 32837751 1181 + protein coding gene secretoglobin, family 1B, member 15
Scgb2b16-ps 7 32874544 to 32876689 2145 - pseudogene secretoglobin, family 2B, member 16, pseudogene
Scgb1b16-ps 7 32883655 to 32884048 393 + pseudogene secretoglobin, family 1B, member 16, pseudogene
Gm25817 7 32917146 to 32917266 120 + miRNA gene predicted gene, 25817
Gm9156 7 32931373 to 32931835 462 - pseudogene predicted gene 9156
Gm28409 7 32931925 to 32932027 102 + pseudogene predicted gene 28409
Scgb2b32-ps 7 32972200 to 32973961 1761 - pseudogene secretoglobin, family 2B, member 32, pseudogene
Gm4405 7 33018397 to 33019378 981 + pseudogene predicted gene 4405
Gm28383 7 33033037 to 33033175 138 - pseudogene predicted gene 28383
Gm28384 7 33033271 to 33033733 462 + pseudogene predicted gene 28384
Scgb2b17 7 33054582 to 33056552 1970 - protein coding gene secretoglobin, family 2B, member 17
Scgb1b17 7 33063465 to 33064646 1181 + protein coding gene secretoglobin, family 1B, member 17
Gm28992 7 33101869 to 33102007 138 - pseudogene predicted gene 28992
Rpl23a-ps7 7 33102103 to 33102562 459 + pseudogene ribosomal protein L23A, pseudogene 7
Scgb2b33 7 33111673 to 33113458 1785 - protein coding gene secretoglobin, family 2B, member 33
Gm9162 7 33137119 to 33138109 990 + pseudogene predicted gene 9162
Gm28559 7 33164974 to 33165112 138 - pseudogene predicted gene 28559
Gm6003 7 33165208 to 33165670 462 + pseudogene predicted gene 6003
Scgb2b18 7 33171892 to 33173861 1969 - protein coding gene secretoglobin, family 2B, member 18
Scgb1b18 7 33185568 to 33186868 1300 + protein coding gene secretoglobin, family 1B, member 18
Scgb2b19 7 33278370 to 33280338 1968 - protein coding gene secretoglobin, family 2B, member 19
Scgb1b19 7 33287307 to 33288491 1184 + protein coding gene secretoglobin, family 1B, member 19
Gm9167 7 33312140 to 33313101 961 + pseudogene predicted gene 9167
Scgb2b20 7 33364343 to 33366319 1976 - protein coding gene secretoglobin, family 2B, member 20
Scgb1b20 7 33373234 to 33374559 1325 + protein coding gene secretoglobin, family 1B, member 20
Gm5732 7 33402819 to 33403825 1006 + pseudogene predicted gene 5732
Gm28794 7 33423439 to 33423574 135 - pseudogene predicted gene 28794
Gm5731 7 33423670 to 33424150 480 + pseudogene predicted gene 5731
Scgb1b34-ps 7 33443029 to 33444811 1782 - pseudogene secretoglobin, family 1B, member 34, pseudogene
Scgb2b21 7 33518488 to 33520455 1967 - protein coding gene secretoglobin, family 2B, member 21
Tssr2195 7 33527357 to 33527360 3 + TSS region transcription start site region 2195
Scgb1b21 7 33527376 to 33528558 1182 + protein coding gene secretoglobin, family 1B, member 21
Gm12770 7 33567253 to 33567714 461 - pseudogene predicted gene 12770
Gm12771 7 33568156 to 33568290 134 + pseudogene predicted gene 12771
Scgb2b22-ps 7 33604264 to 33606052 1788 - pseudogene secretoglobin, family 2B, member 22, pseudogene
Tssr2196 7 33606064 to 33606074 10 - TSS region transcription start site region 2196
Scgb1b22-ps 7 33614622 to 33615807 1185 + pseudogene secretoglobin, family 1B, member 22, pseudogene
Scgb2b23-ps 7 33625145 to 33653281 28136 - pseudogene secretoglobin, family 2B, member 23, pseudogene
Tssr65865 7 33635145 to 33635147 2 + TSS region transcription start site region 65865
Scgb1b23-ps 7 33635164 to 33635533 369 + pseudogene secretoglobin, family 1B, member 23, pseudogene
Tssr65866 7 33653453 to 33653493 40 + TSS region transcription start site region 65866
Gm12763 7 33653461 to 33657731 4270 + lincRNA gene predicted gene 12763
Rpl23a-ps12 7 33697270 to 33697737 467 + pseudogene ribosomal protein L23A, pseudogene 12
Scgb2b24 7 33737193 to 33739295 2102 - protein coding gene secretoglobin, family 2B, member 24
Tssr71961 7 33739303 to 33739322 19 - TSS region transcription start site region 71961
Tssr2197 7 33741838 to 33741843 5 + TSS region transcription start site region 2197
D7Mit308 7 33742910 to 33743025 115 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 308
D7Dcr5 7 33742913 to 33743013 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 5
Tssr65867 7 33743737 to 33743743 6 + TSS region transcription start site region 65867
Tssr65868 7 33743781 to 33743788 7 + TSS region transcription start site region 65868
Scgb1b24 7 33743799 to 33744982 1183 + protein coding gene secretoglobin, family 1B, member 24
Gm12782 7 33780829 to 33781537 708 - pseudogene predicted gene 12782
Gm28614 7 33795310 to 33796135 825 - pseudogene predicted gene 28614
W3q10 7 33798302 to 58499217 24700915 QTL weight 3 weeks QTL 10
Lvrq6 7 33798302 to 58499217 24700915 QTL liver weight QTL 6
W10q18 7 33798302 to 58499217 24700915 QTL weight 10 weeks QTL 18
Tailq5 7 33798302 to 58499217 24700915 QTL tail length QTL 5
Splq7 7 33798302 to 58499217 24700915 QTL spleen weight QTL 7
Epfq5 7 33798302 to 58499217 24700915 QTL epididymal fat pad weight QTL 5
D7Mit55 7 33798302 to 33798450 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 55
Kidq5 7 33798302 to 58499217 24700915 QTL kidney weight QTL 5
W6q17 7 33798302 to 58499217 24700915 QTL weight 6 weeks QTL 17
Gm26443 7 33808117 to 33808226 109 + miRNA gene predicted gene, 26443