Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3124482-3314560

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123 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Speer9-ps1 7 3128146 to 3144992 16846 + pseudogene spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1
Gm29708 7 3149993 to 3151019 1026 + pseudogene predicted gene, 29708
AU018091 7 3154658 to 3169203 14545 - protein coding gene expressed sequence AU018091
Tssr70380 7 3155373 to 3155376 3 - TSS region transcription start site region 70380
Tssr70381 7 3155547 to 3155552 5 - TSS region transcription start site region 70381
Tssr70382 7 3164510 to 3164520 10 - TSS region transcription start site region 70382
Tssr70383 7 3169061 to 3169080 19 - TSS region transcription start site region 70383
Tssr70384 7 3169085 to 3169092 7 - TSS region transcription start site region 70384
Tssr70385 7 3169093 to 3169112 19 - TSS region transcription start site region 70385
Tssr70386 7 3169145 to 3169150 5 - TSS region transcription start site region 70386
Tssr64182 7 3181066 to 3181080 14 + TSS region transcription start site region 64182
Gm3375 7 3181093 to 3181888 795 + pseudogene predicted gene 3375
Tssr70387 7 3201150 to 3201158 8 - TSS region transcription start site region 70387
Tssr70388 7 3201259 to 3201267 8 - TSS region transcription start site region 70388
Tssr70389 7 3203884 to 3203897 13 - TSS region transcription start site region 70389
Tssr70390 7 3203998 to 3204010 12 - TSS region transcription start site region 70390
Tssr70391 7 3204068 to 3204082 14 - TSS region transcription start site region 70391
Tssr70392 7 3204136 to 3204143 7 - TSS region transcription start site region 70392
Tssr70393 7 3206451 to 3206471 20 - TSS region transcription start site region 70393
Tssr64183 7 3206866 to 3206879 13 + TSS region transcription start site region 64183
Tssr64184 7 3206919 to 3206933 14 + TSS region transcription start site region 64184
Tssr64185 7 3206938 to 3206950 12 + TSS region transcription start site region 64185
Tssr64186 7 3206964 to 3206971 7 + TSS region transcription start site region 64186
Tssr64187 7 3207055 to 3207069 14 + TSS region transcription start site region 64187
Tssr64188 7 3207088 to 3207097 9 + TSS region transcription start site region 64188
Tssr64189 7 3210783 to 3210792 9 + TSS region transcription start site region 64189
Tssr70394 7 3212140 to 3212154 14 - TSS region transcription start site region 70394
Tssr70395 7 3212587 to 3212597 10 - TSS region transcription start site region 70395
Tssr70396 7 3212628 to 3212633 5 - TSS region transcription start site region 70396
Tssr64190 7 3213807 to 3213822 15 + TSS region transcription start site region 64190
Tssr64191 7 3213875 to 3213886 11 + TSS region transcription start site region 64191
Tssr70397 7 3216982 to 3217010 28 - TSS region transcription start site region 70397
Tssr64192 7 3217796 to 3217801 5 + TSS region transcription start site region 64192
Tssr64193 7 3217832 to 3217838 6 + TSS region transcription start site region 64193
Tssr64194 7 3218169 to 3218176 7 + TSS region transcription start site region 64194
Tssr64195 7 3218315 to 3218324 9 + TSS region transcription start site region 64195
Tssr64196 7 3218395 to 3218407 12 + TSS region transcription start site region 64196
Mir290a 7 3218626 to 3218708 82 + miRNA gene microRNA 290a
Mirc5 7 3218626 to 3220841 2215 complex/cluster/region microRNA cluster 5, including Mir290a through Mir295
Mir290b 7 3218638 to 3218695 57 - miRNA gene microRNA 290b
Tssr64197 7 3218697 to 3218731 34 + TSS region transcription start site region 64197
Cpgi18197 7 3218716 to 3219047 331 CpG island CpG island 18197
Mir291a 7 3218919 to 3219000 81 + miRNA gene microRNA 291a
Mir292 7 3219189 to 3219270 81 + miRNA gene microRNA 292
Mir292b 7 3219198 to 3219259 61 - miRNA gene microRNA 292b
Tssr64198 7 3219236 to 3219264 28 + TSS region transcription start site region 64198
Cpgi18198 7 3219374 to 3219537 163 CpG island CpG island 18198
Mir291b 7 3219482 to 3219560 78 + miRNA gene microRNA 291b
Nlrp12 7 3219495 to 3250159 30664 - protein coding gene NLR family, pyrin domain containing 12
Tssr64199 7 3219526 to 3219559 33 + TSS region transcription start site region 64199
Mirc41 7 3220343 to 3220841 498 complex/cluster/region micro RNA cluster 41, including Mir293 through Mir295
Mir293 7 3220343 to 3220422 79 + miRNA gene microRNA 293
Mir294 7 3220641 to 3220724 83 + miRNA gene microRNA 294
Mir295 7 3220773 to 3220841 68 + miRNA gene microRNA 295
D7Ertd143e 7 3220806 to 3221012 206 DNA segment DNA segment, Chr 7, ERATO Doi 143, expressed
Tssr64200 7 3220812 to 3220817 5 + TSS region transcription start site region 64200
Tssr70398 7 3228509 to 3228518 9 - TSS region transcription start site region 70398
Tssr70399 7 3228530 to 3228541 11 - TSS region transcription start site region 70399
Tssr70400 7 3249621 to 3249633 12 - TSS region transcription start site region 70400
Tssr70401 7 3249659 to 3249672 13 - TSS region transcription start site region 70401
Tssr70402 7 3249711 to 3249755 44 - TSS region transcription start site region 70402
Tssr64201 7 3249858 to 3249867 9 + TSS region transcription start site region 64201
Gm20553 7 3264349 to 3265192 843 - pseudogene predicted gene, 20553
Cpgi18199 7 3264627 to 3265106 479 CpG island CpG island 18199
Mprf 7 3266568 to 3266693 125 QTL maternal performance
D7Mit21 7 3266568 to 3266693 125 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 21
Pbft4 7 3266568 to 3266693 125 QTL percent body fat 4
Gm5340 7 3284599 to 3285474 875 - pseudogene predicted gene 5340
Cpgi18200 7 3284959 to 3285139 180 CpG island CpG island 18200
Tssr64202 7 3289012 to 3289047 35 + TSS region transcription start site region 64202
Myadm 7 3289038 to 3299355 10317 + protein coding gene myeloid-associated differentiation marker
Tssr64203 7 3289063 to 3289099 36 + TSS region transcription start site region 64203
Cpgi18201 7 3289153 to 3289305 152 CpG island CpG island 18201
Tssr64204 7 3289200 to 3289212 12 + TSS region transcription start site region 64204
Tssr64205 7 3289216 to 3289232 16 + TSS region transcription start site region 64205
Tssr64206 7 3289261 to 3289301 40 + TSS region transcription start site region 64206
Tssr64207 7 3289515 to 3289517 2 + TSS region transcription start site region 64207
Tssr70403 7 3290135 to 3290151 16 - TSS region transcription start site region 70403
Tssr64208 7 3290540 to 3290549 9 + TSS region transcription start site region 64208
Tssr64209 7 3290553 to 3290586 33 + TSS region transcription start site region 64209
Tssr64210 7 3290588 to 3290614 26 + TSS region transcription start site region 64210
Tssr64211 7 3291493 to 3291504 11 + TSS region transcription start site region 64211
Tssr64212 7 3292975 to 3292990 15 + TSS region transcription start site region 64212
Tssr64213 7 3293000 to 3293016 16 + TSS region transcription start site region 64213
Tssr64214 7 3293027 to 3293061 34 + TSS region transcription start site region 64214
Tssr64215 7 3293073 to 3293122 49 + TSS region transcription start site region 64215
Tssr64216 7 3293126 to 3293135 9 + TSS region transcription start site region 64216
Tssr64217 7 3293139 to 3293181 42 + TSS region transcription start site region 64217
Tssr64218 7 3296784 to 3296804 20 + TSS region transcription start site region 64218
Tssr70404 7 3296788 to 3296801 13 - TSS region transcription start site region 70404
Tssr64219 7 3296805 to 3296821 16 + TSS region transcription start site region 64219
Tssr64220 7 3296957 to 3296990 33 + TSS region transcription start site region 64220
Tssr64221 7 3296994 to 3297011 17 + TSS region transcription start site region 64221
Tssr70405 7 3297050 to 3297083 33 - TSS region transcription start site region 70405
Tssr64222 7 3297376 to 3297420 44 + TSS region transcription start site region 64222
Tssr64223 7 3297425 to 3297443 18 + TSS region transcription start site region 64223
Tssr64224 7 3297506 to 3297527 21 + TSS region transcription start site region 64224
Tssr64225 7 3297549 to 3297560 11 + TSS region transcription start site region 64225
Tssr64226 7 3297576 to 3297583 7 + TSS region transcription start site region 64226
Tssr64227 7 3297598 to 3297606 8 + TSS region transcription start site region 64227
Tssr64228 7 3297679 to 3297711 32 + TSS region transcription start site region 64228
Tssr64229 7 3297739 to 3297806 67 + TSS region transcription start site region 64229
Tssr64230 7 3297808 to 3297838 30 + TSS region transcription start site region 64230
Tssr64231 7 3297889 to 3297903 14 + TSS region transcription start site region 64231
Tssr64232 7 3297922 to 3297933 11 + TSS region transcription start site region 64232
Tssr64233 7 3298093 to 3298119 26 + TSS region transcription start site region 64233
Tssr64234 7 3298129 to 3298138 9 + TSS region transcription start site region 64234
Tssr64235 7 3298204 to 3298232 28 + TSS region transcription start site region 64235
Tssr64236 7 3298775 to 3298810 35 + TSS region transcription start site region 64236
Tssr64237 7 3298875 to 3298880 5 + TSS region transcription start site region 64237
Tssr64238 7 3299037 to 3299048 11 + TSS region transcription start site region 64238
Tssr64239 7 3299075 to 3299085 10 + TSS region transcription start site region 64239
Cpgi18202 7 3301953 to 3302389 436 CpG island CpG island 18202
Tssr64240 7 3303503 to 3303565 62 + TSS region transcription start site region 64240
Cpgi18203 7 3303516 to 3303917 401 CpG island CpG island 18203
Prkcg 7 3303532 to 3331099 27567 + protein coding gene protein kinase C, gamma
Tssr64241 7 3303571 to 3303584 13 + TSS region transcription start site region 64241
Tssr64242 7 3303643 to 3303654 11 + TSS region transcription start site region 64242
Tssr64243 7 3303701 to 3303708 7 + TSS region transcription start site region 64243
Tssr64244 7 3308951 to 3308958 7 + TSS region transcription start site region 64244
Cpgi18204 7 3310681 to 3311039 358 CpG island CpG island 18204
Abhr3 7 16903498 to 3266568 -13636930 QTL allergen-induced bronchial hyperresponsiveness 3
Lrdm1 7 25179993 to 3303532 -21876461 QTL lymphoproliferation (Fas) renal disease modifier 1