Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30610107-30690122

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Upk1a 7 30603092 to 30612734 9642 - protein coding gene uroplakin 1A
Tssr71818 7 30612731 to 30612744 13 - TSS region transcription start site region 71818
Tssr71819 7 30612761 to 30612771 10 - TSS region transcription start site region 71819
Tssr71820 7 30612797 to 30612881 84 - TSS region transcription start site region 71820
Tssr71821 7 30613861 to 30613865 4 - TSS region transcription start site region 71821
Cox6b1 7 30616974 to 30626151 9177 - protein coding gene cytochrome c oxidase, subunit 6B1
Tssr71822 7 30620902 to 30620907 5 - TSS region transcription start site region 71822
Tssr71823 7 30624534 to 30624570 36 - TSS region transcription start site region 71823
Cpgi18815 7 30625646 to 30626349 703 CpG island CpG island 18815
Tssr71824 7 30626079 to 30626122 43 - TSS region transcription start site region 71824
Tssr71825 7 30626124 to 30626126 2 - TSS region transcription start site region 71825
Tssr71826 7 30626127 to 30626139 12 - TSS region transcription start site region 71826
Tssr71827 7 30626145 to 30626164 19 - TSS region transcription start site region 71827
Cpgi18816 7 30633587 to 30634247 660 CpG island CpG island 18816
Etv2 7 30633616 to 30635852 2236 - protein coding gene ets variant 2
Cpgi18817 7 30634656 to 30635125 469 CpG island CpG island 18817
Tssr71828 7 30634747 to 30634772 25 - TSS region transcription start site region 71828
Tssr71829 7 30636514 to 30636529 15 - TSS region transcription start site region 71829
4921520E09Rik 7 30636629 to 30638412 1783 unclassified gene RIKEN cDNA 4921520E09 gene
Rbm42 7 30640995 to 30650228 9233 - protein coding gene RNA binding motif protein 42
Gm21982 7 30641001 to 30664937 23936 - unclassified non-coding RNA gene predicted gene 21982
Cpgi18818 7 30649622 to 30650490 868 CpG island CpG island 18818
Tssr71830 7 30649996 to 30650011 15 - TSS region transcription start site region 71830
Tssr71831 7 30650107 to 30650122 15 - TSS region transcription start site region 71831
Tssr71832 7 30650123 to 30650182 59 - TSS region transcription start site region 71832
Gm26610 7 30650385 to 30652711 2326 + lincRNA gene predicted gene, 26610
Tssr65795 7 30650411 to 30650439 28 + TSS region transcription start site region 65795
Haus5 7 30653711 to 30664994 11283 - protein coding gene HAUS augmin-like complex, subunit 5
Tssr71833 7 30660236 to 30660248 12 - TSS region transcription start site region 71833
Tssr71834 7 30660250 to 30660263 13 - TSS region transcription start site region 71834
Cpgi18819 7 30664692 to 30665164 472 CpG island CpG island 18819
Tssr71835 7 30664941 to 30664984 43 - TSS region transcription start site region 71835
Tssr71836 7 30664986 to 30664999 13 - TSS region transcription start site region 71836
Pmis2 7 30670722 to 30671605 883 - protein coding gene Pmis2, sperm specific protein
Tssr71837 7 30671541 to 30671544 3 - TSS region transcription start site region 71837
Tssr71838 7 30671556 to 30671566 10 - TSS region transcription start site region 71838
Tssr71839 7 30671571 to 30671594 23 - TSS region transcription start site region 71839
Tssr71840 7 30671595 to 30671618 23 - TSS region transcription start site region 71840
Tssr71841 7 30671626 to 30671629 3 - TSS region transcription start site region 71841
Tssr2187 7 30671644 to 30671649 5 - TSS region transcription start site region 2187