Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30563861-30663865

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
U2af1l4 7 30563340 to 30565364 2024 + protein coding gene U2 small nuclear RNA auxiliary factor 1-like 4
Gm49396 7 30563344 to 30567960 4616 + protein coding gene predicted gene, 49396
Tssr65791 7 30565402 to 30565407 5 + TSS region transcription start site region 65791
Tssr65792 7 30565410 to 30565432 22 + TSS region transcription start site region 65792
Igflr1 7 30565427 to 30567962 2535 + protein coding gene IGF-like family receptor 1
Kmt2b 7 30568858 to 30588726 19868 - protein coding gene lysine (K)-specific methyltransferase 2B
Cpgi18812 7 30587972 to 30590075 2103 CpG island CpG island 18812
Tssr71804 7 30588720 to 30588749 29 - TSS region transcription start site region 71804
Tssr71805 7 30588830 to 30588855 25 - TSS region transcription start site region 71805
Gm32082 7 30588902 to 30591524 2622 + lncRNA gene predicted gene, 32082
Tssr71806 7 30588939 to 30588989 50 - TSS region transcription start site region 71806
Mir3569 7 30589380 to 30589437 57 + miRNA gene microRNA 3569
Zbtb32 7 30589681 to 30598909 9228 - protein coding gene zinc finger and BTB domain containing 32
Tssr65793 7 30589775 to 30589798 23 + TSS region transcription start site region 65793
Tssr71807 7 30592941 to 30592954 13 - TSS region transcription start site region 71807
Tssr71808 7 30598819 to 30598826 7 - TSS region transcription start site region 71808
Tssr71809 7 30598831 to 30598855 24 - TSS region transcription start site region 71809
Tssr71810 7 30598863 to 30598884 21 - TSS region transcription start site region 71810
Tssr71811 7 30598899 to 30598912 13 - TSS region transcription start site region 71811
Cpgi18813 7 30600057 to 30600404 347 CpG island CpG island 18813
Upk1a 7 30603092 to 30612734 9642 - protein coding gene uroplakin 1A
Tssr71812 7 30603518 to 30603528 10 - TSS region transcription start site region 71812
Tssr71813 7 30603559 to 30603565 6 - TSS region transcription start site region 71813
Tssr71814 7 30603578 to 30603585 7 - TSS region transcription start site region 71814
Tssr71815 7 30603803 to 30603812 9 - TSS region transcription start site region 71815
Tssr71816 7 30605197 to 30605205 8 - TSS region transcription start site region 71816
Tssr65794 7 30606916 to 30606948 32 + TSS region transcription start site region 65794
Tssr71817 7 30606926 to 30606942 16 - TSS region transcription start site region 71817
Cpgi18814 7 30609587 to 30609769 182 CpG island CpG island 18814
Tssr71818 7 30612731 to 30612744 13 - TSS region transcription start site region 71818
Tssr71819 7 30612761 to 30612771 10 - TSS region transcription start site region 71819
Tssr71820 7 30612797 to 30612881 84 - TSS region transcription start site region 71820
Tssr71821 7 30613861 to 30613865 4 - TSS region transcription start site region 71821
Cox6b1 7 30616974 to 30626151 9177 - protein coding gene cytochrome c oxidase, subunit 6B1
Tssr71822 7 30620902 to 30620907 5 - TSS region transcription start site region 71822
Tssr71823 7 30624534 to 30624570 36 - TSS region transcription start site region 71823
Cpgi18815 7 30625646 to 30626349 703 CpG island CpG island 18815
Tssr71824 7 30626079 to 30626122 43 - TSS region transcription start site region 71824
Tssr71825 7 30626124 to 30626126 2 - TSS region transcription start site region 71825
Tssr71826 7 30626127 to 30626139 12 - TSS region transcription start site region 71826
Tssr71827 7 30626145 to 30626164 19 - TSS region transcription start site region 71827
Cpgi18816 7 30633587 to 30634247 660 CpG island CpG island 18816
Etv2 7 30633616 to 30635852 2236 - protein coding gene ets variant 2
Cpgi18817 7 30634656 to 30635125 469 CpG island CpG island 18817
Tssr71828 7 30634747 to 30634772 25 - TSS region transcription start site region 71828
Tssr71829 7 30636514 to 30636529 15 - TSS region transcription start site region 71829
4921520E09Rik 7 30636629 to 30638412 1783 unclassified gene RIKEN cDNA 4921520E09 gene
Rbm42 7 30640995 to 30650228 9233 - protein coding gene RNA binding motif protein 42
Gm21982 7 30641001 to 30664937 23936 - unclassified non-coding RNA gene predicted gene 21982
Cpgi18818 7 30649622 to 30650490 868 CpG island CpG island 18818
Tssr71830 7 30649996 to 30650011 15 - TSS region transcription start site region 71830
Tssr71831 7 30650107 to 30650122 15 - TSS region transcription start site region 71831
Tssr71832 7 30650123 to 30650182 59 - TSS region transcription start site region 71832
Gm26610 7 30650385 to 30652711 2326 + lincRNA gene predicted gene, 26610
Tssr65795 7 30650411 to 30650439 28 + TSS region transcription start site region 65795
Haus5 7 30653711 to 30664994 11283 - protein coding gene HAUS augmin-like complex, subunit 5
Tssr71833 7 30660236 to 30660248 12 - TSS region transcription start site region 71833
Tssr71834 7 30660250 to 30660263 13 - TSS region transcription start site region 71834