Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30417805-31657856

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525 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcst 7 30417712 to 30419854 2142 - protein coding gene hematopoietic cell signal transducer
Tssr65710 7 30418158 to 30418169 11 + TSS region transcription start site region 65710
Tssr65711 7 30419614 to 30419665 51 + TSS region transcription start site region 65711
Tssr65712 7 30419679 to 30419692 13 + TSS region transcription start site region 65712
Tssr71741 7 30419768 to 30419776 8 - TSS region transcription start site region 71741
Tssr71742 7 30419802 to 30419872 70 - TSS region transcription start site region 71742
Tssr65713 7 30419915 to 30419949 34 + TSS region transcription start site region 65713
Tssr71743 7 30420352 to 30420362 10 - TSS region transcription start site region 71743
Tssr71744 7 30420364 to 30420373 9 - TSS region transcription start site region 71744
Cpgi18799 7 30421417 to 30422808 1391 CpG island CpG island 18799
Tssr71745 7 30421608 to 30421636 28 - TSS region transcription start site region 71745
Tssr65714 7 30421724 to 30421742 18 + TSS region transcription start site region 65714
Nfkbid 7 30421732 to 30428746 7014 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
Tssr65715 7 30422272 to 30422295 23 + TSS region transcription start site region 65715
Tssr65716 7 30422389 to 30422431 42 + TSS region transcription start site region 65716
Tssr65717 7 30422433 to 30422444 11 + TSS region transcription start site region 65717
Tssr65718 7 30422461 to 30422470 9 + TSS region transcription start site region 65718
Cpgi18800 7 30423094 to 30423532 438 CpG island CpG island 18800
Tssr65719 7 30423266 to 30423293 27 + TSS region transcription start site region 65719
Tssr65720 7 30423305 to 30423314 9 + TSS region transcription start site region 65720
Tssr2184 7 30423344 to 30423348 4 + TSS region transcription start site region 2184
Tssr65721 7 30423362 to 30423371 9 + TSS region transcription start site region 65721
Tssr65722 7 30423381 to 30423408 27 + TSS region transcription start site region 65722
Tssr65723 7 30423412 to 30423423 11 + TSS region transcription start site region 65723
Tssr65724 7 30423428 to 30423477 49 + TSS region transcription start site region 65724
Tssr65725 7 30423600 to 30423605 5 + TSS region transcription start site region 65725
Tssr65726 7 30423607 to 30423610 3 + TSS region transcription start site region 65726
Tssr65727 7 30423625 to 30423644 19 + TSS region transcription start site region 65727
Tssr65728 7 30423920 to 30423922 2 + TSS region transcription start site region 65728
Tssr65729 7 30424238 to 30424247 9 + TSS region transcription start site region 65729
Tssr65730 7 30424286 to 30424302 16 + TSS region transcription start site region 65730
Tssr65731 7 30424312 to 30424316 4 + TSS region transcription start site region 65731
Tssr65732 7 30424350 to 30424366 16 + TSS region transcription start site region 65732
Tssr65733 7 30424378 to 30424385 7 + TSS region transcription start site region 65733
Tssr65734 7 30424419 to 30424424 5 + TSS region transcription start site region 65734
Tssr65735 7 30425218 to 30425225 7 + TSS region transcription start site region 65735
Tssr65736 7 30425237 to 30425245 8 + TSS region transcription start site region 65736
Tssr65737 7 30425271 to 30425289 18 + TSS region transcription start site region 65737
Tssr65738 7 30425327 to 30425334 7 + TSS region transcription start site region 65738
Tssr71746 7 30425397 to 30425407 10 - TSS region transcription start site region 71746
Tssr65739 7 30425523 to 30425548 25 + TSS region transcription start site region 65739
Tssr65740 7 30425550 to 30425572 22 + TSS region transcription start site region 65740
Tssr65741 7 30425703 to 30425710 7 + TSS region transcription start site region 65741
Tssr65742 7 30425720 to 30425726 6 + TSS region transcription start site region 65742
Tssr65743 7 30425772 to 30425775 3 + TSS region transcription start site region 65743
Tssr65744 7 30425799 to 30425810 11 + TSS region transcription start site region 65744
Tssr65745 7 30426111 to 30426126 15 + TSS region transcription start site region 65745
Tssr71747 7 30426181 to 30426203 22 - TSS region transcription start site region 71747
Tssr65746 7 30427069 to 30427076 7 + TSS region transcription start site region 65746
Tssr65747 7 30427098 to 30427110 12 + TSS region transcription start site region 65747
Tssr65748 7 30427113 to 30427122 9 + TSS region transcription start site region 65748
Tssr65749 7 30427125 to 30427130 5 + TSS region transcription start site region 65749
Tssr65750 7 30427154 to 30427169 15 + TSS region transcription start site region 65750
Tssr65751 7 30427422 to 30427441 19 + TSS region transcription start site region 65751
Tssr65752 7 30427458 to 30427472 14 + TSS region transcription start site region 65752
Tssr65753 7 30427482 to 30427503 21 + TSS region transcription start site region 65753
Tssr65754 7 30427589 to 30427593 4 + TSS region transcription start site region 65754
Tssr65755 7 30427620 to 30427628 8 + TSS region transcription start site region 65755
Tssr65756 7 30428154 to 30428166 12 + TSS region transcription start site region 65756
Tssr65757 7 30428184 to 30428188 4 + TSS region transcription start site region 65757
Tssr65758 7 30428360 to 30428369 9 + TSS region transcription start site region 65758
Tssr65759 7 30428372 to 30428380 8 + TSS region transcription start site region 65759
Tssr65760 7 30428386 to 30428397 11 + TSS region transcription start site region 65760
Tssr65761 7 30428458 to 30428461 3 + TSS region transcription start site region 65761
Tssr65762 7 30428472 to 30428483 11 + TSS region transcription start site region 65762
Tssr71748 7 30428513 to 30428519 6 - TSS region transcription start site region 71748
Tssr71749 7 30428557 to 30428566 9 - TSS region transcription start site region 71749
Tssr71750 7 30428568 to 30428584 16 - TSS region transcription start site region 71750
Tssr71751 7 30428598 to 30428611 13 - TSS region transcription start site region 71751
Tssr71752 7 30428723 to 30428748 25 - TSS region transcription start site region 71752
Tssr71753 7 30431910 to 30431914 4 - TSS region transcription start site region 71753
Gm30646 7 30432544 to 30432723 179 + pseudogene predicted gene, 30646
Aplp1 7 30434982 to 30445535 10553 - protein coding gene amyloid beta (A4) precursor-like protein 1
Tssr65763 7 30435118 to 30435158 40 + TSS region transcription start site region 65763
Tssr71754 7 30435148 to 30435171 23 - TSS region transcription start site region 71754
Tssr71755 7 30435196 to 30435215 19 - TSS region transcription start site region 71755
Tssr71756 7 30435232 to 30435273 41 - TSS region transcription start site region 71756
Tssr71757 7 30435281 to 30435310 29 - TSS region transcription start site region 71757
Tssr71758 7 30435324 to 30435351 27 - TSS region transcription start site region 71758
Tssr71759 7 30435382 to 30435399 17 - TSS region transcription start site region 71759
Cocia17 7 30435779 to 30435779 0 QTL cocaine-induced activity, QTL 17
Tssr71760 7 30435779 to 30435787 8 - TSS region transcription start site region 71760
Tssr71761 7 30436988 to 30437014 26 - TSS region transcription start site region 71761
Tssr71762 7 30437017 to 30437062 45 - TSS region transcription start site region 71762
Tssr71763 7 30437065 to 30437083 18 - TSS region transcription start site region 71763
Tssr71764 7 30438211 to 30438233 22 - TSS region transcription start site region 71764
Cpgi18801 7 30439966 to 30440272 306 CpG island CpG island 18801
Tssr71765 7 30440028 to 30440045 17 - TSS region transcription start site region 71765
Tssr71766 7 30440319 to 30440336 17 - TSS region transcription start site region 71766
Tssr71767 7 30440409 to 30440446 37 - TSS region transcription start site region 71767
Tssr65764 7 30442208 to 30442235 27 + TSS region transcription start site region 65764
Tssr71768 7 30442254 to 30442277 23 - TSS region transcription start site region 71768
Tssr71769 7 30442281 to 30442303 22 - TSS region transcription start site region 71769
Tssr71770 7 30442862 to 30442873 11 - TSS region transcription start site region 71770
Cpgi18802 7 30444184 to 30446032 1848 CpG island CpG island 18802
Tssr71771 7 30444416 to 30444430 14 - TSS region transcription start site region 71771
Tssr71772 7 30444579 to 30444611 32 - TSS region transcription start site region 71772
Tssr71773 7 30445462 to 30445494 32 - TSS region transcription start site region 71773
Tssr71774 7 30445495 to 30445501 6 - TSS region transcription start site region 71774
Tssr71775 7 30445508 to 30445591 83 - TSS region transcription start site region 71775
Tssr2185 7 30445597 to 30445606 9 - TSS region transcription start site region 2185
Kirrel2 7 30447766 to 30457515 9749 - protein coding gene kirre like nephrin family adhesion molecule 2
Cpgi18803 7 30453282 to 30454443 1161 CpG island CpG island 18803
Tssr71776 7 30453788 to 30453811 23 - TSS region transcription start site region 71776
Tssr65765 7 30454552 to 30454559 7 + TSS region transcription start site region 65765
Gm45979 7 30454701 to 30455622 921 + lncRNA gene predicted gene, 45979
Cpgi18804 7 30456855 to 30457472 617 CpG island CpG island 18804
Tssr71777 7 30457030 to 30457070 40 - TSS region transcription start site region 71777
Tssr71778 7 30457397 to 30457435 38 - TSS region transcription start site region 71778
Tssr65766 7 30457484 to 30457493 9 + TSS region transcription start site region 65766
Tssr65767 7 30458243 to 30458254 11 + TSS region transcription start site region 65767
Tssr65768 7 30458280 to 30458293 13 + TSS region transcription start site region 65768
Nphs1 7 30458315 to 30487223 28908 + protein coding gene nephrosis 1, nephrin
Tssr65769 7 30459691 to 30459700 9 + TSS region transcription start site region 65769
Tssr65770 7 30459713 to 30459745 32 + TSS region transcription start site region 65770
Tssr65771 7 30459752 to 30459763 11 + TSS region transcription start site region 65771
Nphs1os 7 30462164 to 30465591 3427 - antisense lncRNA gene nephrosis 1 homolog, nephrin, opposite strand
Tssr65772 7 30465295 to 30465318 23 + TSS region transcription start site region 65772
Tssr65773 7 30465326 to 30465364 38 + TSS region transcription start site region 65773
Cpgi18805 7 30465354 to 30466232 878 CpG island CpG island 18805
Tssr65774 7 30465365 to 30465383 18 + TSS region transcription start site region 65774
Tssr65775 7 30465488 to 30465499 11 + TSS region transcription start site region 65775
Tssr65776 7 30465735 to 30465762 27 + TSS region transcription start site region 65776
Rps12-ps4 7 30484701 to 30485097 396 - pseudogene ribosomal protein S12, pseudogene 4
Tssr71779 7 30485182 to 30485183 1 - TSS region transcription start site region 71779
Prodh2 7 30493622 to 30513402 19780 + protein coding gene proline dehydrogenase (oxidase) 2
Tssr65777 7 30493631 to 30493666 35 + TSS region transcription start site region 65777
Cpgi18806 7 30493811 to 30494345 534 CpG island CpG island 18806
D7Mit344 7 30494940 to 30495059 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 344
Arhgap33os 7 30515122 to 30522193 7071 + antisense lncRNA gene Rho GTPase activating protein 33, opposite strand
Tssr65778 7 30515145 to 30515156 11 + TSS region transcription start site region 65778
Tssr2186 7 30515229 to 30515236 7 + TSS region transcription start site region 2186
Arhgap33 7 30522226 to 30535060 12834 - protein coding gene Rho GTPase activating protein 33
Tssr71780 7 30524421 to 30524426 5 - TSS region transcription start site region 71780
Tssr71781 7 30526162 to 30526182 20 - TSS region transcription start site region 71781
Tssr71782 7 30526458 to 30526464 6 - TSS region transcription start site region 71782
Cpgi18807 7 30534195 to 30535560 1365 CpG island CpG island 18807
Tssr71783 7 30534792 to 30534815 23 - TSS region transcription start site region 71783
Tssr71784 7 30535006 to 30535047 41 - TSS region transcription start site region 71784
Tssr71785 7 30535056 to 30535066 10 - TSS region transcription start site region 71785
Tssr71786 7 30535082 to 30535093 11 - TSS region transcription start site region 71786
Proser3 7 30539134 to 30552299 13165 - protein coding gene proline and serine rich 3
1700019A23Rik 7 30539666 to 30539861 195 + unclassified gene RIKEN cDNA 1700019A23 gene
D7Mit343 7 30550602 to 30550721 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 343
Cpgi18808 7 30551981 to 30552651 670 CpG island CpG island 18808
Tssr71787 7 30552255 to 30552316 61 - TSS region transcription start site region 71787
Tssr71788 7 30552346 to 30552375 29 - TSS region transcription start site region 71788
Tssr65779 7 30552532 to 30552564 32 + TSS region transcription start site region 65779
Hspb6 7 30552556 to 30555439 2883 + protein coding gene heat shock protein, alpha-crystallin-related, B6
Gm38670 7 30552828 to 30552904 76 + miRNA gene predicted gene, 38670
Cpgi18809 7 30553191 to 30553534 343 CpG island CpG island 18809
Tssr65780 7 30553263 to 30553272 9 + TSS region transcription start site region 65780
Tssr65781 7 30553293 to 30553309 16 + TSS region transcription start site region 65781
Cpgi18810 7 30554226 to 30554597 371 CpG island CpG island 18810
Tssr71789 7 30554665 to 30554688 23 - TSS region transcription start site region 71789
Tssr65782 7 30554772 to 30554794 22 + TSS region transcription start site region 65782
Tssr71790 7 30554777 to 30554830 53 - TSS region transcription start site region 71790
Tssr65783 7 30554847 to 30554860 13 + TSS region transcription start site region 65783
Tssr65784 7 30554871 to 30554884 13 + TSS region transcription start site region 65784
Tssr65785 7 30554923 to 30554939 16 + TSS region transcription start site region 65785
Tssr65786 7 30554941 to 30554952 11 + TSS region transcription start site region 65786
Tssr65787 7 30555035 to 30555047 12 + TSS region transcription start site region 65787
Lin37 7 30555441 to 30559723 4282 - protein coding gene lin-37 homolog (C. elegans)
Tssr71791 7 30558742 to 30558747 5 - TSS region transcription start site region 71791
Tssr71792 7 30558773 to 30558785 12 - TSS region transcription start site region 71792
Tssr71793 7 30559498 to 30559531 33 - TSS region transcription start site region 71793
Tssr71794 7 30559600 to 30559652 52 - TSS region transcription start site region 71794
Tssr71795 7 30559828 to 30559842 14 - TSS region transcription start site region 71795
Psenen 7 30561865 to 30563184 1319 - protein coding gene presenilin enhancer gamma secretase subunit
Tssr71796 7 30562741 to 30562770 29 - TSS region transcription start site region 71796
Tssr71797 7 30562912 to 30562933 21 - TSS region transcription start site region 71797
Cpgi18811 7 30562918 to 30563691 773 CpG island CpG island 18811
Tssr71798 7 30562937 to 30562953 16 - TSS region transcription start site region 71798
Tssr71799 7 30562954 to 30562966 12 - TSS region transcription start site region 71799
Tssr71800 7 30562996 to 30563024 28 - TSS region transcription start site region 71800
Tssr71801 7 30563187 to 30563229 42 - TSS region transcription start site region 71801
Tssr71802 7 30563235 to 30563256 21 - TSS region transcription start site region 71802
Tssr71803 7 30563264 to 30563275 11 - TSS region transcription start site region 71803
Tssr65788 7 30563298 to 30563349 51 + TSS region transcription start site region 65788
U2af1l4 7 30563340 to 30565364 2024 + protein coding gene U2 small nuclear RNA auxiliary factor 1-like 4
Gm49396 7 30563344 to 30567960 4616 + protein coding gene predicted gene, 49396
Tssr65789 7 30563800 to 30563826 26 + TSS region transcription start site region 65789
Tssr65790 7 30563838 to 30563849 11 + TSS region transcription start site region 65790
Tssr65791 7 30565402 to 30565407 5 + TSS region transcription start site region 65791
Tssr65792 7 30565410 to 30565432 22 + TSS region transcription start site region 65792
Igflr1 7 30565427 to 30567962 2535 + protein coding gene IGF-like family receptor 1
Kmt2b 7 30568858 to 30588726 19868 - protein coding gene lysine (K)-specific methyltransferase 2B
Cpgi18812 7 30587972 to 30590075 2103 CpG island CpG island 18812
Tssr71804 7 30588720 to 30588749 29 - TSS region transcription start site region 71804
Tssr71805 7 30588830 to 30588855 25 - TSS region transcription start site region 71805
Gm32082 7 30588902 to 30591524 2622 + lncRNA gene predicted gene, 32082
Tssr71806 7 30588939 to 30588989 50 - TSS region transcription start site region 71806
Mir3569 7 30589380 to 30589437 57 + miRNA gene microRNA 3569
Zbtb32 7 30589681 to 30598909 9228 - protein coding gene zinc finger and BTB domain containing 32
Tssr65793 7 30589775 to 30589798 23 + TSS region transcription start site region 65793
Tssr71807 7 30592941 to 30592954 13 - TSS region transcription start site region 71807
Tssr71808 7 30598819 to 30598826 7 - TSS region transcription start site region 71808
Tssr71809 7 30598831 to 30598855 24 - TSS region transcription start site region 71809
Tssr71810 7 30598863 to 30598884 21 - TSS region transcription start site region 71810
Tssr71811 7 30598899 to 30598912 13 - TSS region transcription start site region 71811