Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30292164-30635591

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308 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clip3 7 30291728 to 30308367 16639 + protein coding gene CAP-GLY domain containing linker protein 3
Tssr65677 7 30292145 to 30292169 24 + TSS region transcription start site region 65677
Tssr65678 7 30292258 to 30292303 45 + TSS region transcription start site region 65678
Cpgi18788 7 30297354 to 30297513 159 CpG island CpG island 18788
Tssr65679 7 30298943 to 30298960 17 + TSS region transcription start site region 65679
Tssr65680 7 30303469 to 30303482 13 + TSS region transcription start site region 65680
Tssr65681 7 30303906 to 30303926 20 + TSS region transcription start site region 65681
Tssr65682 7 30306835 to 30306853 18 + TSS region transcription start site region 65682
Tssr65683 7 30306856 to 30306879 23 + TSS region transcription start site region 65683
Tssr65684 7 30307060 to 30307101 41 + TSS region transcription start site region 65684
Tssr65685 7 30307111 to 30307129 18 + TSS region transcription start site region 65685
Tssr65686 7 30307147 to 30307169 22 + TSS region transcription start site region 65686
Tssr65687 7 30307207 to 30307230 23 + TSS region transcription start site region 65687
Tssr65688 7 30307233 to 30307278 45 + TSS region transcription start site region 65688
Tssr65689 7 30307316 to 30307354 38 + TSS region transcription start site region 65689
Tssr65690 7 30307361 to 30307378 17 + TSS region transcription start site region 65690
Tssr65691 7 30307663 to 30307676 13 + TSS region transcription start site region 65691
Tssr65692 7 30308266 to 30308277 11 + TSS region transcription start site region 65692
Cpgi18789 7 30308542 to 30309256 714 CpG island CpG island 18789
Tssr65693 7 30308741 to 30308758 17 + TSS region transcription start site region 65693
Alkbh6 7 30308753 to 30314303 5550 + protein coding gene alkB homolog 6
Tssr65694 7 30308760 to 30308771 11 + TSS region transcription start site region 65694
Tssr65695 7 30308772 to 30308818 46 + TSS region transcription start site region 65695
Gm24757 7 30311525 to 30311895 370 + unclassified non-coding RNA gene predicted gene, 24757
Cpgi18790 7 30314018 to 30314212 194 CpG island CpG island 18790
Tssr71722 7 30314174 to 30314185 11 - TSS region transcription start site region 71722
Tssr65696 7 30314810 to 30314870 60 + TSS region transcription start site region 65696
Syne4 7 30314816 to 30319045 4229 + protein coding gene spectrin repeat containing, nuclear envelope family member 4
Sdhaf1 7 30321409 to 30322375 966 - protein coding gene succinate dehydrogenase complex assembly factor 1
Cpgi18791 7 30321701 to 30322706 1005 CpG island CpG island 18791
E130208F15Rik 7 30321740 to 30323472 1732 + protein coding gene RIKEN cDNA E130208F15 gene
Tssr65697 7 30321753 to 30321774 21 + TSS region transcription start site region 65697
Tssr65698 7 30321777 to 30321822 45 + TSS region transcription start site region 65698
Tssr71723 7 30322293 to 30322370 77 - TSS region transcription start site region 71723
Tssr71724 7 30322378 to 30322392 14 - TSS region transcription start site region 71724
Tssr71725 7 30322409 to 30322418 9 - TSS region transcription start site region 71725
Tssr65699 7 30322555 to 30322569 14 + TSS region transcription start site region 65699
Tssr71726 7 30323020 to 30323030 10 - TSS region transcription start site region 71726
Tssr71727 7 30323035 to 30323049 14 - TSS region transcription start site region 71727
Cpgi18792 7 30327218 to 30327464 246 CpG island CpG island 18792
Tssr65700 7 30332228 to 30332238 10 + TSS region transcription start site region 65700
Cpgi18793 7 30332232 to 30332441 209 CpG island CpG island 18793
D7Mit246 7 30333060 to 30333196 136 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 246
Femwf8 7 30333060 to 30333196 136 QTL femur work to failure 8
Sle19 7 30333060 to 81485905 51152845 QTL systematic lupus erythematosus susceptibility 19
D7Dcr4 7 30333099 to 30333215 116 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 4
nmf206 7 30333196 to 3463212 -26869984 heritable phenotypic marker neuroscience mutagenesis facility, 206
4930479H17Rik 7 30347645 to 30353321 5676 - lincRNA gene RIKEN cDNA 4930479H17 gene
Cpgi18794 7 30347757 to 30348180 423 CpG island CpG island 18794
Tssr71728 7 30353335 to 30353344 9 - TSS region transcription start site region 71728
Tssr71729 7 30353346 to 30353360 14 - TSS region transcription start site region 71729
Lrfn3 7 30355514 to 30362772 7258 - protein coding gene leucine rich repeat and fibronectin type III domain containing 3
Cpgi18795 7 30355644 to 30356174 530 CpG island CpG island 18795
Gm25259 7 30356732 to 30356924 192 - snRNA gene predicted gene, 25259
Cpgi18796 7 30359387 to 30360855 1468 CpG island CpG island 18796
Tssr71730 7 30360417 to 30360424 7 - TSS region transcription start site region 71730
Tssr65701 7 30360602 to 30360603 1 + TSS region transcription start site region 65701
Cpgi18797 7 30362661 to 30363259 598 CpG island CpG island 18797
Tssr71731 7 30363090 to 30363137 47 - TSS region transcription start site region 71731
Cpgi18798 7 30373562 to 30373966 404 CpG island CpG island 18798
Gm42376 7 30392399 to 30398644 6245 - lncRNA gene predicted gene, 42376
Tssr71732 7 30394308 to 30394310 2 - TSS region transcription start site region 71732
Tssr2182 7 30394370 to 30394380 10 - TSS region transcription start site region 2182
Tssr71733 7 30394430 to 30394441 11 - TSS region transcription start site region 71733
Tssr71734 7 30394522 to 30394552 30 - TSS region transcription start site region 71734
Tssr71735 7 30394564 to 30394575 11 - TSS region transcription start site region 71735
Tssr2183 7 30394826 to 30394828 2 + TSS region transcription start site region 2183
Gm32029 7 30410916 to 30413705 2789 - lncRNA gene predicted gene, 32029
Tssr65702 7 30412917 to 30412949 32 + TSS region transcription start site region 65702
Tssr71736 7 30413419 to 30413451 32 - TSS region transcription start site region 71736
Tssr71737 7 30413684 to 30413694 10 - TSS region transcription start site region 71737
Tssr65703 7 30413744 to 30413831 87 + TSS region transcription start site region 65703
Tyrobp 7 30413788 to 30417582 3794 + protein coding gene TYRO protein tyrosine kinase binding protein
Tssr65704 7 30414340 to 30414371 31 + TSS region transcription start site region 65704
Tssr65705 7 30414492 to 30414586 94 + TSS region transcription start site region 65705
Tssr65706 7 30415509 to 30415534 25 + TSS region transcription start site region 65706
Tssr65707 7 30415710 to 30415741 31 + TSS region transcription start site region 65707
Tssr65708 7 30417334 to 30417388 54 + TSS region transcription start site region 65708
Tssr71738 7 30417383 to 30417436 53 - TSS region transcription start site region 71738
Tssr65709 7 30417389 to 30417426 37 + TSS region transcription start site region 65709
Tssr71739 7 30417463 to 30417498 35 - TSS region transcription start site region 71739
Tssr71740 7 30417570 to 30417581 11 - TSS region transcription start site region 71740
Hcst 7 30417712 to 30419854 2142 - protein coding gene hematopoietic cell signal transducer
Tssr65710 7 30418158 to 30418169 11 + TSS region transcription start site region 65710
Tssr65711 7 30419614 to 30419665 51 + TSS region transcription start site region 65711
Tssr65712 7 30419679 to 30419692 13 + TSS region transcription start site region 65712
Tssr71741 7 30419768 to 30419776 8 - TSS region transcription start site region 71741
Tssr71742 7 30419802 to 30419872 70 - TSS region transcription start site region 71742
Tssr65713 7 30419915 to 30419949 34 + TSS region transcription start site region 65713
Tssr71743 7 30420352 to 30420362 10 - TSS region transcription start site region 71743
Tssr71744 7 30420364 to 30420373 9 - TSS region transcription start site region 71744
Cpgi18799 7 30421417 to 30422808 1391 CpG island CpG island 18799
Tssr71745 7 30421608 to 30421636 28 - TSS region transcription start site region 71745
Tssr65714 7 30421724 to 30421742 18 + TSS region transcription start site region 65714
Nfkbid 7 30421732 to 30428746 7014 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
Tssr65715 7 30422272 to 30422295 23 + TSS region transcription start site region 65715
Tssr65716 7 30422389 to 30422431 42 + TSS region transcription start site region 65716
Tssr65717 7 30422433 to 30422444 11 + TSS region transcription start site region 65717
Tssr65718 7 30422461 to 30422470 9 + TSS region transcription start site region 65718
Cpgi18800 7 30423094 to 30423532 438 CpG island CpG island 18800
Tssr65719 7 30423266 to 30423293 27 + TSS region transcription start site region 65719
Tssr65720 7 30423305 to 30423314 9 + TSS region transcription start site region 65720
Tssr2184 7 30423344 to 30423348 4 + TSS region transcription start site region 2184
Tssr65721 7 30423362 to 30423371 9 + TSS region transcription start site region 65721
Tssr65722 7 30423381 to 30423408 27 + TSS region transcription start site region 65722
Tssr65723 7 30423412 to 30423423 11 + TSS region transcription start site region 65723
Tssr65724 7 30423428 to 30423477 49 + TSS region transcription start site region 65724
Tssr65725 7 30423600 to 30423605 5 + TSS region transcription start site region 65725
Tssr65726 7 30423607 to 30423610 3 + TSS region transcription start site region 65726
Tssr65727 7 30423625 to 30423644 19 + TSS region transcription start site region 65727
Tssr65728 7 30423920 to 30423922 2 + TSS region transcription start site region 65728
Tssr65729 7 30424238 to 30424247 9 + TSS region transcription start site region 65729
Tssr65730 7 30424286 to 30424302 16 + TSS region transcription start site region 65730
Tssr65731 7 30424312 to 30424316 4 + TSS region transcription start site region 65731
Tssr65732 7 30424350 to 30424366 16 + TSS region transcription start site region 65732
Tssr65733 7 30424378 to 30424385 7 + TSS region transcription start site region 65733
Tssr65734 7 30424419 to 30424424 5 + TSS region transcription start site region 65734
Tssr65735 7 30425218 to 30425225 7 + TSS region transcription start site region 65735
Tssr65736 7 30425237 to 30425245 8 + TSS region transcription start site region 65736
Tssr65737 7 30425271 to 30425289 18 + TSS region transcription start site region 65737
Tssr65738 7 30425327 to 30425334 7 + TSS region transcription start site region 65738
Tssr71746 7 30425397 to 30425407 10 - TSS region transcription start site region 71746
Tssr65739 7 30425523 to 30425548 25 + TSS region transcription start site region 65739
Tssr65740 7 30425550 to 30425572 22 + TSS region transcription start site region 65740
Tssr65741 7 30425703 to 30425710 7 + TSS region transcription start site region 65741
Tssr65742 7 30425720 to 30425726 6 + TSS region transcription start site region 65742
Tssr65743 7 30425772 to 30425775 3 + TSS region transcription start site region 65743
Tssr65744 7 30425799 to 30425810 11 + TSS region transcription start site region 65744
Tssr65745 7 30426111 to 30426126 15 + TSS region transcription start site region 65745
Tssr71747 7 30426181 to 30426203 22 - TSS region transcription start site region 71747
Tssr65746 7 30427069 to 30427076 7 + TSS region transcription start site region 65746
Tssr65747 7 30427098 to 30427110 12 + TSS region transcription start site region 65747
Tssr65748 7 30427113 to 30427122 9 + TSS region transcription start site region 65748
Tssr65749 7 30427125 to 30427130 5 + TSS region transcription start site region 65749
Tssr65750 7 30427154 to 30427169 15 + TSS region transcription start site region 65750
Tssr65751 7 30427422 to 30427441 19 + TSS region transcription start site region 65751
Tssr65752 7 30427458 to 30427472 14 + TSS region transcription start site region 65752
Tssr65753 7 30427482 to 30427503 21 + TSS region transcription start site region 65753
Tssr65754 7 30427589 to 30427593 4 + TSS region transcription start site region 65754
Tssr65755 7 30427620 to 30427628 8 + TSS region transcription start site region 65755
Tssr65756 7 30428154 to 30428166 12 + TSS region transcription start site region 65756
Tssr65757 7 30428184 to 30428188 4 + TSS region transcription start site region 65757
Tssr65758 7 30428360 to 30428369 9 + TSS region transcription start site region 65758
Tssr65759 7 30428372 to 30428380 8 + TSS region transcription start site region 65759
Tssr65760 7 30428386 to 30428397 11 + TSS region transcription start site region 65760
Tssr65761 7 30428458 to 30428461 3 + TSS region transcription start site region 65761
Tssr65762 7 30428472 to 30428483 11 + TSS region transcription start site region 65762
Tssr71748 7 30428513 to 30428519 6 - TSS region transcription start site region 71748
Tssr71749 7 30428557 to 30428566 9 - TSS region transcription start site region 71749
Tssr71750 7 30428568 to 30428584 16 - TSS region transcription start site region 71750
Tssr71751 7 30428598 to 30428611 13 - TSS region transcription start site region 71751
Tssr71752 7 30428723 to 30428748 25 - TSS region transcription start site region 71752
Tssr71753 7 30431910 to 30431914 4 - TSS region transcription start site region 71753
Gm30646 7 30432544 to 30432723 179 + pseudogene predicted gene, 30646
Aplp1 7 30434982 to 30445535 10553 - protein coding gene amyloid beta (A4) precursor-like protein 1
Tssr65763 7 30435118 to 30435158 40 + TSS region transcription start site region 65763
Tssr71754 7 30435148 to 30435171 23 - TSS region transcription start site region 71754
Tssr71755 7 30435196 to 30435215 19 - TSS region transcription start site region 71755
Tssr71756 7 30435232 to 30435273 41 - TSS region transcription start site region 71756
Tssr71757 7 30435281 to 30435310 29 - TSS region transcription start site region 71757
Tssr71758 7 30435324 to 30435351 27 - TSS region transcription start site region 71758
Tssr71759 7 30435382 to 30435399 17 - TSS region transcription start site region 71759
Tssr71760 7 30435779 to 30435787 8 - TSS region transcription start site region 71760
Cocia17 7 30435779 to 30435779 0 QTL cocaine-induced activity, QTL 17
Tssr71761 7 30436988 to 30437014 26 - TSS region transcription start site region 71761
Tssr71762 7 30437017 to 30437062 45 - TSS region transcription start site region 71762
Tssr71763 7 30437065 to 30437083 18 - TSS region transcription start site region 71763
Tssr71764 7 30438211 to 30438233 22 - TSS region transcription start site region 71764
Cpgi18801 7 30439966 to 30440272 306 CpG island CpG island 18801
Tssr71765 7 30440028 to 30440045 17 - TSS region transcription start site region 71765
Tssr71766 7 30440319 to 30440336 17 - TSS region transcription start site region 71766
Tssr71767 7 30440409 to 30440446 37 - TSS region transcription start site region 71767
Tssr65764 7 30442208 to 30442235 27 + TSS region transcription start site region 65764
Tssr71768 7 30442254 to 30442277 23 - TSS region transcription start site region 71768
Tssr71769 7 30442281 to 30442303 22 - TSS region transcription start site region 71769
Tssr71770 7 30442862 to 30442873 11 - TSS region transcription start site region 71770
Cpgi18802 7 30444184 to 30446032 1848 CpG island CpG island 18802
Tssr71771 7 30444416 to 30444430 14 - TSS region transcription start site region 71771
Tssr71772 7 30444579 to 30444611 32 - TSS region transcription start site region 71772
Tssr71773 7 30445462 to 30445494 32 - TSS region transcription start site region 71773
Tssr71774 7 30445495 to 30445501 6 - TSS region transcription start site region 71774
Tssr71775 7 30445508 to 30445591 83 - TSS region transcription start site region 71775
Tssr2185 7 30445597 to 30445606 9 - TSS region transcription start site region 2185
Kirrel2 7 30447766 to 30457515 9749 - protein coding gene kirre like nephrin family adhesion molecule 2
Cpgi18803 7 30453282 to 30454443 1161 CpG island CpG island 18803
Tssr71776 7 30453788 to 30453811 23 - TSS region transcription start site region 71776
Tssr65765 7 30454552 to 30454559 7 + TSS region transcription start site region 65765
Gm45979 7 30454701 to 30455622 921 + lncRNA gene predicted gene, 45979
Cpgi18804 7 30456855 to 30457472 617 CpG island CpG island 18804
Tssr71777 7 30457030 to 30457070 40 - TSS region transcription start site region 71777
Tssr71778 7 30457397 to 30457435 38 - TSS region transcription start site region 71778
Tssr65766 7 30457484 to 30457493 9 + TSS region transcription start site region 65766
Tssr65767 7 30458243 to 30458254 11 + TSS region transcription start site region 65767
Tssr65768 7 30458280 to 30458293 13 + TSS region transcription start site region 65768
Nphs1 7 30458315 to 30487223 28908 + protein coding gene nephrosis 1, nephrin
Tssr65769 7 30459691 to 30459700 9 + TSS region transcription start site region 65769
Tssr65770 7 30459713 to 30459745 32 + TSS region transcription start site region 65770
Tssr65771 7 30459752 to 30459763 11 + TSS region transcription start site region 65771
Nphs1os 7 30462164 to 30465591 3427 - antisense lncRNA gene nephrosis 1 homolog, nephrin, opposite strand
Tssr65772 7 30465295 to 30465318 23 + TSS region transcription start site region 65772