Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30195138-30325419

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capns1 7 30186942 to 30198794 11852 - protein coding gene calpain, small subunit 1
Gm26810 7 30193954 to 30200889 6935 + antisense lncRNA gene predicted gene, 26810
Cpgi18783 7 30194479 to 30195316 837 CpG island CpG island 18783
Tssr71709 7 30195221 to 30195225 4 - TSS region transcription start site region 71709
Tssr71710 7 30195563 to 30195569 6 - TSS region transcription start site region 71710
Tssr71711 7 30198819 to 30198843 24 - TSS region transcription start site region 71711
Tssr71712 7 30198851 to 30198879 28 - TSS region transcription start site region 71712
Gm44600 7 30212628 to 30212738 110 - pseudogene predicted gene 44600
Cpgi18784 7 30216848 to 30217107 259 CpG island CpG island 18784
Tssr71713 7 30216926 to 30216933 7 - TSS region transcription start site region 71713
Tbcb 7 30224130 to 30232029 7899 - protein coding gene tubulin folding cofactor B
Cpgi18785 7 30231421 to 30233095 1674 CpG island CpG island 18785
Tssr71714 7 30231705 to 30231716 11 - TSS region transcription start site region 71714
Tssr71715 7 30231722 to 30231790 68 - TSS region transcription start site region 71715
Tssr65663 7 30231884 to 30231901 17 + TSS region transcription start site region 65663
Tssr65664 7 30232033 to 30232050 17 + TSS region transcription start site region 65664
Polr2i 7 30232074 to 30233387 1313 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide I
Tssr71716 7 30232186 to 30232205 19 - TSS region transcription start site region 71716
Tssr65665 7 30232310 to 30232350 40 + TSS region transcription start site region 65665
Ovol3 7 30233439 to 30235725 2286 - protein coding gene ovo like zinc finger 3
Wdr62 7 30240138 to 30280419 40281 - protein coding gene WD repeat domain 62
Tssr71717 7 30242863 to 30242871 8 - TSS region transcription start site region 71717
Tssr71718 7 30242875 to 30242882 7 - TSS region transcription start site region 71718
Tssr71719 7 30243499 to 30243535 36 - TSS region transcription start site region 71719
Tssr65666 7 30263174 to 30263179 5 + TSS region transcription start site region 65666
Rps12-ps5 7 30263263 to 30263651 388 + pseudogene ribosomal protein S12, pseudogene 5
Tssr71720 7 30263955 to 30263958 3 - TSS region transcription start site region 71720
Cpgi18786 7 30279736 to 30281020 1284 CpG island CpG island 18786
Tssr65667 7 30280087 to 30280142 55 + TSS region transcription start site region 65667
Thap8 7 30280094 to 30290237 10143 + protein coding gene THAP domain containing 8
Tssr65668 7 30280186 to 30280188 2 + TSS region transcription start site region 65668
Tssr71721 7 30280335 to 30280424 89 - TSS region transcription start site region 71721
Tssr65669 7 30280534 to 30280584 50 + TSS region transcription start site region 65669
Cpgi18787 7 30291516 to 30292020 504 CpG island CpG island 18787
Tssr65670 7 30291659 to 30291768 109 + TSS region transcription start site region 65670
Clip3 7 30291728 to 30308367 16639 + protein coding gene CAP-GLY domain containing linker protein 3
Tssr65671 7 30291771 to 30291779 8 + TSS region transcription start site region 65671
Tssr65672 7 30291784 to 30291787 3 + TSS region transcription start site region 65672
Tssr65673 7 30291803 to 30291807 4 + TSS region transcription start site region 65673
Tssr65674 7 30291916 to 30291939 23 + TSS region transcription start site region 65674
Tssr65675 7 30291941 to 30291968 27 + TSS region transcription start site region 65675
Tssr65676 7 30292001 to 30292012 11 + TSS region transcription start site region 65676
Tssr65677 7 30292145 to 30292169 24 + TSS region transcription start site region 65677
Tssr65678 7 30292258 to 30292303 45 + TSS region transcription start site region 65678
Cpgi18788 7 30297354 to 30297513 159 CpG island CpG island 18788
Tssr65679 7 30298943 to 30298960 17 + TSS region transcription start site region 65679
Tssr65680 7 30303469 to 30303482 13 + TSS region transcription start site region 65680
Tssr65681 7 30303906 to 30303926 20 + TSS region transcription start site region 65681
Tssr65682 7 30306835 to 30306853 18 + TSS region transcription start site region 65682
Tssr65683 7 30306856 to 30306879 23 + TSS region transcription start site region 65683
Tssr65684 7 30307060 to 30307101 41 + TSS region transcription start site region 65684
Tssr65685 7 30307111 to 30307129 18 + TSS region transcription start site region 65685
Tssr65686 7 30307147 to 30307169 22 + TSS region transcription start site region 65686
Tssr65687 7 30307207 to 30307230 23 + TSS region transcription start site region 65687
Tssr65688 7 30307233 to 30307278 45 + TSS region transcription start site region 65688
Tssr65689 7 30307316 to 30307354 38 + TSS region transcription start site region 65689
Tssr65690 7 30307361 to 30307378 17 + TSS region transcription start site region 65690
Tssr65691 7 30307663 to 30307676 13 + TSS region transcription start site region 65691
Tssr65692 7 30308266 to 30308277 11 + TSS region transcription start site region 65692
Cpgi18789 7 30308542 to 30309256 714 CpG island CpG island 18789
Tssr65693 7 30308741 to 30308758 17 + TSS region transcription start site region 65693
Alkbh6 7 30308753 to 30314303 5550 + protein coding gene alkB homolog 6
Tssr65694 7 30308760 to 30308771 11 + TSS region transcription start site region 65694
Tssr65695 7 30308772 to 30308818 46 + TSS region transcription start site region 65695
Gm24757 7 30311525 to 30311895 370 + unclassified non-coding RNA gene predicted gene, 24757
Cpgi18790 7 30314018 to 30314212 194 CpG island CpG island 18790
Tssr71722 7 30314174 to 30314185 11 - TSS region transcription start site region 71722
Tssr65696 7 30314810 to 30314870 60 + TSS region transcription start site region 65696
Syne4 7 30314816 to 30319045 4229 + protein coding gene spectrin repeat containing, nuclear envelope family member 4
Sdhaf1 7 30321409 to 30322375 966 - protein coding gene succinate dehydrogenase complex assembly factor 1
Cpgi18791 7 30321701 to 30322706 1005 CpG island CpG island 18791
E130208F15Rik 7 30321740 to 30323472 1732 + protein coding gene RIKEN cDNA E130208F15 gene
Tssr65697 7 30321753 to 30321774 21 + TSS region transcription start site region 65697
Tssr65698 7 30321777 to 30321822 45 + TSS region transcription start site region 65698
Tssr71723 7 30322293 to 30322370 77 - TSS region transcription start site region 71723
Tssr71724 7 30322378 to 30322392 14 - TSS region transcription start site region 71724
Tssr71725 7 30322409 to 30322418 9 - TSS region transcription start site region 71725
Tssr65699 7 30322555 to 30322569 14 + TSS region transcription start site region 65699
Tssr71726 7 30323020 to 30323030 10 - TSS region transcription start site region 71726
Tssr71727 7 30323035 to 30323049 14 - TSS region transcription start site region 71727