Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30189871-30919884

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469 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capns1 7 30186942 to 30198794 11852 - protein coding gene calpain, small subunit 1
Tssr71694 7 30190119 to 30190140 21 - TSS region transcription start site region 71694
Tssr71695 7 30190690 to 30190738 48 - TSS region transcription start site region 71695
Cpgi18781 7 30192839 to 30193029 190 CpG island CpG island 18781
Tssr71696 7 30192906 to 30192930 24 - TSS region transcription start site region 71696
Tssr71697 7 30192944 to 30192951 7 - TSS region transcription start site region 71697
Tssr71698 7 30192968 to 30192982 14 - TSS region transcription start site region 71698
Tssr71699 7 30193098 to 30193108 10 - TSS region transcription start site region 71699
Tssr71700 7 30193120 to 30193143 23 - TSS region transcription start site region 71700
Tssr71701 7 30193338 to 30193367 29 - TSS region transcription start site region 71701
Cpgi18782 7 30193787 to 30194041 254 CpG island CpG island 18782
Tssr71702 7 30193794 to 30193819 25 - TSS region transcription start site region 71702
Tssr65662 7 30193929 to 30193957 28 + TSS region transcription start site region 65662
Gm26810 7 30193954 to 30200889 6935 + antisense lncRNA gene predicted gene, 26810
Tssr71703 7 30194000 to 30194033 33 - TSS region transcription start site region 71703
Tssr71704 7 30194094 to 30194140 46 - TSS region transcription start site region 71704
Tssr71705 7 30194152 to 30194162 10 - TSS region transcription start site region 71705
Cpgi18783 7 30194479 to 30195316 837 CpG island CpG island 18783
Tssr71706 7 30195020 to 30195031 11 - TSS region transcription start site region 71706
Tssr71707 7 30195032 to 30195043 11 - TSS region transcription start site region 71707
Tssr71708 7 30195046 to 30195090 44 - TSS region transcription start site region 71708
Tssr71709 7 30195221 to 30195225 4 - TSS region transcription start site region 71709
Tssr71710 7 30195563 to 30195569 6 - TSS region transcription start site region 71710
Tssr71711 7 30198819 to 30198843 24 - TSS region transcription start site region 71711
Tssr71712 7 30198851 to 30198879 28 - TSS region transcription start site region 71712
Gm44600 7 30212628 to 30212738 110 - pseudogene predicted gene 44600
Cpgi18784 7 30216848 to 30217107 259 CpG island CpG island 18784
Tssr71713 7 30216926 to 30216933 7 - TSS region transcription start site region 71713
Tbcb 7 30224130 to 30232029 7899 - protein coding gene tubulin folding cofactor B
Cpgi18785 7 30231421 to 30233095 1674 CpG island CpG island 18785
Tssr71714 7 30231705 to 30231716 11 - TSS region transcription start site region 71714
Tssr71715 7 30231722 to 30231790 68 - TSS region transcription start site region 71715
Tssr65663 7 30231884 to 30231901 17 + TSS region transcription start site region 65663
Tssr65664 7 30232033 to 30232050 17 + TSS region transcription start site region 65664
Polr2i 7 30232074 to 30233387 1313 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide I
Tssr71716 7 30232186 to 30232205 19 - TSS region transcription start site region 71716
Tssr65665 7 30232310 to 30232350 40 + TSS region transcription start site region 65665
Ovol3 7 30233439 to 30235725 2286 - protein coding gene ovo like zinc finger 3
Wdr62 7 30240138 to 30280419 40281 - protein coding gene WD repeat domain 62
Tssr71717 7 30242863 to 30242871 8 - TSS region transcription start site region 71717
Tssr71718 7 30242875 to 30242882 7 - TSS region transcription start site region 71718
Tssr71719 7 30243499 to 30243535 36 - TSS region transcription start site region 71719
Tssr65666 7 30263174 to 30263179 5 + TSS region transcription start site region 65666
Rps12-ps5 7 30263263 to 30263651 388 + pseudogene ribosomal protein S12, pseudogene 5
Tssr71720 7 30263955 to 30263958 3 - TSS region transcription start site region 71720
Cpgi18786 7 30279736 to 30281020 1284 CpG island CpG island 18786
Tssr65667 7 30280087 to 30280142 55 + TSS region transcription start site region 65667
Thap8 7 30280094 to 30290237 10143 + protein coding gene THAP domain containing 8
Tssr65668 7 30280186 to 30280188 2 + TSS region transcription start site region 65668
Tssr71721 7 30280335 to 30280424 89 - TSS region transcription start site region 71721
Tssr65669 7 30280534 to 30280584 50 + TSS region transcription start site region 65669
Cpgi18787 7 30291516 to 30292020 504 CpG island CpG island 18787
Tssr65670 7 30291659 to 30291768 109 + TSS region transcription start site region 65670
Clip3 7 30291728 to 30308367 16639 + protein coding gene CAP-GLY domain containing linker protein 3
Tssr65671 7 30291771 to 30291779 8 + TSS region transcription start site region 65671
Tssr65672 7 30291784 to 30291787 3 + TSS region transcription start site region 65672
Tssr65673 7 30291803 to 30291807 4 + TSS region transcription start site region 65673
Tssr65674 7 30291916 to 30291939 23 + TSS region transcription start site region 65674
Tssr65675 7 30291941 to 30291968 27 + TSS region transcription start site region 65675
Tssr65676 7 30292001 to 30292012 11 + TSS region transcription start site region 65676
Tssr65677 7 30292145 to 30292169 24 + TSS region transcription start site region 65677
Tssr65678 7 30292258 to 30292303 45 + TSS region transcription start site region 65678
Cpgi18788 7 30297354 to 30297513 159 CpG island CpG island 18788
Tssr65679 7 30298943 to 30298960 17 + TSS region transcription start site region 65679
Tssr65680 7 30303469 to 30303482 13 + TSS region transcription start site region 65680
Tssr65681 7 30303906 to 30303926 20 + TSS region transcription start site region 65681
Tssr65682 7 30306835 to 30306853 18 + TSS region transcription start site region 65682
Tssr65683 7 30306856 to 30306879 23 + TSS region transcription start site region 65683
Tssr65684 7 30307060 to 30307101 41 + TSS region transcription start site region 65684
Tssr65685 7 30307111 to 30307129 18 + TSS region transcription start site region 65685
Tssr65686 7 30307147 to 30307169 22 + TSS region transcription start site region 65686
Tssr65687 7 30307207 to 30307230 23 + TSS region transcription start site region 65687
Tssr65688 7 30307233 to 30307278 45 + TSS region transcription start site region 65688
Tssr65689 7 30307316 to 30307354 38 + TSS region transcription start site region 65689
Tssr65690 7 30307361 to 30307378 17 + TSS region transcription start site region 65690
Tssr65691 7 30307663 to 30307676 13 + TSS region transcription start site region 65691
Tssr65692 7 30308266 to 30308277 11 + TSS region transcription start site region 65692
Cpgi18789 7 30308542 to 30309256 714 CpG island CpG island 18789
Tssr65693 7 30308741 to 30308758 17 + TSS region transcription start site region 65693
Alkbh6 7 30308753 to 30314303 5550 + protein coding gene alkB homolog 6
Tssr65694 7 30308760 to 30308771 11 + TSS region transcription start site region 65694
Tssr65695 7 30308772 to 30308818 46 + TSS region transcription start site region 65695
Gm24757 7 30311525 to 30311895 370 + unclassified non-coding RNA gene predicted gene, 24757
Cpgi18790 7 30314018 to 30314212 194 CpG island CpG island 18790
Tssr71722 7 30314174 to 30314185 11 - TSS region transcription start site region 71722
Tssr65696 7 30314810 to 30314870 60 + TSS region transcription start site region 65696
Syne4 7 30314816 to 30319045 4229 + protein coding gene spectrin repeat containing, nuclear envelope family member 4
Sdhaf1 7 30321409 to 30322375 966 - protein coding gene succinate dehydrogenase complex assembly factor 1
Cpgi18791 7 30321701 to 30322706 1005 CpG island CpG island 18791
E130208F15Rik 7 30321740 to 30323472 1732 + protein coding gene RIKEN cDNA E130208F15 gene
Tssr65697 7 30321753 to 30321774 21 + TSS region transcription start site region 65697
Tssr65698 7 30321777 to 30321822 45 + TSS region transcription start site region 65698
Tssr71723 7 30322293 to 30322370 77 - TSS region transcription start site region 71723
Tssr71724 7 30322378 to 30322392 14 - TSS region transcription start site region 71724
Tssr71725 7 30322409 to 30322418 9 - TSS region transcription start site region 71725
Tssr65699 7 30322555 to 30322569 14 + TSS region transcription start site region 65699
Tssr71726 7 30323020 to 30323030 10 - TSS region transcription start site region 71726
Tssr71727 7 30323035 to 30323049 14 - TSS region transcription start site region 71727
Cpgi18792 7 30327218 to 30327464 246 CpG island CpG island 18792
Tssr65700 7 30332228 to 30332238 10 + TSS region transcription start site region 65700
Cpgi18793 7 30332232 to 30332441 209 CpG island CpG island 18793
D7Mit246 7 30333060 to 30333196 136 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 246
Sle19 7 30333060 to 81485905 51152845 QTL systematic lupus erythematosus susceptibility 19
Femwf8 7 30333060 to 30333196 136 QTL femur work to failure 8
D7Dcr4 7 30333099 to 30333215 116 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 4
nmf206 7 30333196 to 3463212 -26869984 heritable phenotypic marker neuroscience mutagenesis facility, 206
4930479H17Rik 7 30347645 to 30353321 5676 - lincRNA gene RIKEN cDNA 4930479H17 gene
Cpgi18794 7 30347757 to 30348180 423 CpG island CpG island 18794
Tssr71728 7 30353335 to 30353344 9 - TSS region transcription start site region 71728
Tssr71729 7 30353346 to 30353360 14 - TSS region transcription start site region 71729
Lrfn3 7 30355514 to 30362772 7258 - protein coding gene leucine rich repeat and fibronectin type III domain containing 3
Cpgi18795 7 30355644 to 30356174 530 CpG island CpG island 18795
Gm25259 7 30356732 to 30356924 192 - snRNA gene predicted gene, 25259
Cpgi18796 7 30359387 to 30360855 1468 CpG island CpG island 18796
Tssr71730 7 30360417 to 30360424 7 - TSS region transcription start site region 71730
Tssr65701 7 30360602 to 30360603 1 + TSS region transcription start site region 65701
Cpgi18797 7 30362661 to 30363259 598 CpG island CpG island 18797
Tssr71731 7 30363090 to 30363137 47 - TSS region transcription start site region 71731
Cpgi18798 7 30373562 to 30373966 404 CpG island CpG island 18798
Gm42376 7 30392399 to 30398644 6245 - lncRNA gene predicted gene, 42376
Tssr71732 7 30394308 to 30394310 2 - TSS region transcription start site region 71732
Tssr2182 7 30394370 to 30394380 10 - TSS region transcription start site region 2182
Tssr71733 7 30394430 to 30394441 11 - TSS region transcription start site region 71733
Tssr71734 7 30394522 to 30394552 30 - TSS region transcription start site region 71734
Tssr71735 7 30394564 to 30394575 11 - TSS region transcription start site region 71735
Tssr2183 7 30394826 to 30394828 2 + TSS region transcription start site region 2183
Gm32029 7 30410916 to 30413705 2789 - lncRNA gene predicted gene, 32029
Tssr65702 7 30412917 to 30412949 32 + TSS region transcription start site region 65702
Tssr71736 7 30413419 to 30413451 32 - TSS region transcription start site region 71736
Tssr71737 7 30413684 to 30413694 10 - TSS region transcription start site region 71737
Tssr65703 7 30413744 to 30413831 87 + TSS region transcription start site region 65703
Tyrobp 7 30413788 to 30417582 3794 + protein coding gene TYRO protein tyrosine kinase binding protein
Tssr65704 7 30414340 to 30414371 31 + TSS region transcription start site region 65704
Tssr65705 7 30414492 to 30414586 94 + TSS region transcription start site region 65705
Tssr65706 7 30415509 to 30415534 25 + TSS region transcription start site region 65706
Tssr65707 7 30415710 to 30415741 31 + TSS region transcription start site region 65707
Tssr65708 7 30417334 to 30417388 54 + TSS region transcription start site region 65708
Tssr71738 7 30417383 to 30417436 53 - TSS region transcription start site region 71738
Tssr65709 7 30417389 to 30417426 37 + TSS region transcription start site region 65709
Tssr71739 7 30417463 to 30417498 35 - TSS region transcription start site region 71739
Tssr71740 7 30417570 to 30417581 11 - TSS region transcription start site region 71740
Hcst 7 30417712 to 30419854 2142 - protein coding gene hematopoietic cell signal transducer
Tssr65710 7 30418158 to 30418169 11 + TSS region transcription start site region 65710
Tssr65711 7 30419614 to 30419665 51 + TSS region transcription start site region 65711
Tssr65712 7 30419679 to 30419692 13 + TSS region transcription start site region 65712
Tssr71741 7 30419768 to 30419776 8 - TSS region transcription start site region 71741
Tssr71742 7 30419802 to 30419872 70 - TSS region transcription start site region 71742
Tssr65713 7 30419915 to 30419949 34 + TSS region transcription start site region 65713
Tssr71743 7 30420352 to 30420362 10 - TSS region transcription start site region 71743
Tssr71744 7 30420364 to 30420373 9 - TSS region transcription start site region 71744
Cpgi18799 7 30421417 to 30422808 1391 CpG island CpG island 18799
Tssr71745 7 30421608 to 30421636 28 - TSS region transcription start site region 71745
Tssr65714 7 30421724 to 30421742 18 + TSS region transcription start site region 65714
Nfkbid 7 30421732 to 30428746 7014 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
Tssr65715 7 30422272 to 30422295 23 + TSS region transcription start site region 65715
Tssr65716 7 30422389 to 30422431 42 + TSS region transcription start site region 65716
Tssr65717 7 30422433 to 30422444 11 + TSS region transcription start site region 65717
Tssr65718 7 30422461 to 30422470 9 + TSS region transcription start site region 65718
Cpgi18800 7 30423094 to 30423532 438 CpG island CpG island 18800
Tssr65719 7 30423266 to 30423293 27 + TSS region transcription start site region 65719
Tssr65720 7 30423305 to 30423314 9 + TSS region transcription start site region 65720
Tssr2184 7 30423344 to 30423348 4 + TSS region transcription start site region 2184
Tssr65721 7 30423362 to 30423371 9 + TSS region transcription start site region 65721
Tssr65722 7 30423381 to 30423408 27 + TSS region transcription start site region 65722
Tssr65723 7 30423412 to 30423423 11 + TSS region transcription start site region 65723
Tssr65724 7 30423428 to 30423477 49 + TSS region transcription start site region 65724
Tssr65725 7 30423600 to 30423605 5 + TSS region transcription start site region 65725
Tssr65726 7 30423607 to 30423610 3 + TSS region transcription start site region 65726
Tssr65727 7 30423625 to 30423644 19 + TSS region transcription start site region 65727
Tssr65728 7 30423920 to 30423922 2 + TSS region transcription start site region 65728
Tssr65729 7 30424238 to 30424247 9 + TSS region transcription start site region 65729
Tssr65730 7 30424286 to 30424302 16 + TSS region transcription start site region 65730
Tssr65731 7 30424312 to 30424316 4 + TSS region transcription start site region 65731
Tssr65732 7 30424350 to 30424366 16 + TSS region transcription start site region 65732
Tssr65733 7 30424378 to 30424385 7 + TSS region transcription start site region 65733
Tssr65734 7 30424419 to 30424424 5 + TSS region transcription start site region 65734
Tssr65735 7 30425218 to 30425225 7 + TSS region transcription start site region 65735
Tssr65736 7 30425237 to 30425245 8 + TSS region transcription start site region 65736
Tssr65737 7 30425271 to 30425289 18 + TSS region transcription start site region 65737
Tssr65738 7 30425327 to 30425334 7 + TSS region transcription start site region 65738
Tssr71746 7 30425397 to 30425407 10 - TSS region transcription start site region 71746
Tssr65739 7 30425523 to 30425548 25 + TSS region transcription start site region 65739
Tssr65740 7 30425550 to 30425572 22 + TSS region transcription start site region 65740
Tssr65741 7 30425703 to 30425710 7 + TSS region transcription start site region 65741
Tssr65742 7 30425720 to 30425726 6 + TSS region transcription start site region 65742
Tssr65743 7 30425772 to 30425775 3 + TSS region transcription start site region 65743
Tssr65744 7 30425799 to 30425810 11 + TSS region transcription start site region 65744
Tssr65745 7 30426111 to 30426126 15 + TSS region transcription start site region 65745
Tssr71747 7 30426181 to 30426203 22 - TSS region transcription start site region 71747
Tssr65746 7 30427069 to 30427076 7 + TSS region transcription start site region 65746
Tssr65747 7 30427098 to 30427110 12 + TSS region transcription start site region 65747
Tssr65748 7 30427113 to 30427122 9 + TSS region transcription start site region 65748
Tssr65749 7 30427125 to 30427130 5 + TSS region transcription start site region 65749
Tssr65750 7 30427154 to 30427169 15 + TSS region transcription start site region 65750
Tssr65751 7 30427422 to 30427441 19 + TSS region transcription start site region 65751
Tssr65752 7 30427458 to 30427472 14 + TSS region transcription start site region 65752
Tssr65753 7 30427482 to 30427503 21 + TSS region transcription start site region 65753
Tssr65754 7 30427589 to 30427593 4 + TSS region transcription start site region 65754
Tssr65755 7 30427620 to 30427628 8 + TSS region transcription start site region 65755
Tssr65756 7 30428154 to 30428166 12 + TSS region transcription start site region 65756