Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29959186-30409211

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176 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C230062I16Rik 7 29960893 to 29969664 8771 + unclassified non-coding RNA gene RIKEN cDNA C230062I16 gene
Gm10169 7 29965218 to 29965565 347 - pseudogene predicted pseudogene 10169
Gm31735 7 29970602 to 29983761 13159 - lncRNA gene predicted gene, 31735
Tssr65650 7 29982122 to 29982133 11 + TSS region transcription start site region 65650
Cpgi18772 7 29983575 to 29984469 894 CpG island CpG island 18772
Tssr65651 7 29983917 to 29983942 25 + TSS region transcription start site region 65651
Tssr65652 7 29983948 to 29983964 16 + TSS region transcription start site region 65652
Zfp568 7 29983955 to 30028282 44327 + protein coding gene zinc finger protein 568
Tssr65653 7 29983976 to 29983988 12 + TSS region transcription start site region 65653
Cpgi18773 7 30034467 to 30034631 164 CpG island CpG island 18773
Zfp14 7 30036359 to 30051380 15021 - protein coding gene zinc finger protein 14
Cpgi18774 7 30050939 to 30051534 595 CpG island CpG island 18774
Tssr71685 7 30051361 to 30051411 50 - TSS region transcription start site region 71685
Tssr65654 7 30054062 to 30054066 4 + TSS region transcription start site region 65654
Gm26920 7 30056034 to 30090410 34376 - protein coding gene predicted gene, 26920
Zfp82 7 30056034 to 30072823 16789 - protein coding gene zinc finger protein 82
Cpgi18775 7 30072176 to 30073067 891 CpG island CpG island 18775
Tssr71686 7 30072872 to 30072924 52 - TSS region transcription start site region 71686
Zfp566 7 30077337 to 30090510 13173 - protein coding gene zinc finger protein 566
Gm44872 7 30085468 to 30085887 419 + pseudogene predicted gene 44872
Cpgi18776 7 30090097 to 30090711 614 CpG island CpG island 18776
Tssr71687 7 30090399 to 30090435 36 - TSS region transcription start site region 71687
Tssr71688 7 30090471 to 30090536 65 - TSS region transcription start site region 71688
Zfp260 7 30094782 to 30107622 12840 + protein coding gene zinc finger protein 260
Cpgi18777 7 30095108 to 30095325 217 CpG island CpG island 18777
Tssr65655 7 30095150 to 30095192 42 + TSS region transcription start site region 65655
A430042F24Rik 7 30096814 to 30097914 1100 unclassified gene RIKEN cDNA A430042F24 gene
Tssr65656 7 30099557 to 30099614 57 + TSS region transcription start site region 65656
Gm23368 7 30100840 to 30100935 95 - miRNA gene predicted gene, 23368
Tssr2181 7 30100841 to 30100843 2 + TSS region transcription start site region 2181
Cpgi18778 7 30121517 to 30122405 888 CpG island CpG island 18778
Tssr65657 7 30121915 to 30122001 86 + TSS region transcription start site region 65657
Zfp382 7 30121942 to 30134950 13008 + protein coding gene zinc finger protein 382
4930428B01Rik 7 30139913 to 30140746 833 unclassified gene RIKEN cDNA 4930428B01 gene
Cpgi18779 7 30143468 to 30144023 555 CpG island CpG island 18779
Gm10988 7 30151841 to 30152928 1087 + pseudogene predicted gene 10988
8430406M14Rik 7 30160488 to 30160784 296 unclassified gene RIKEN cDNA 8430406M14 gene
Zfp146 7 30161269 to 30169750 8481 - protein coding gene zinc finger protein 146
Cpgi18780 7 30169335 to 30170050 715 CpG island CpG island 18780
Tssr71689 7 30169681 to 30169696 15 - TSS region transcription start site region 71689
Tssr71690 7 30169701 to 30169766 65 - TSS region transcription start site region 71690
Tssr65658 7 30169861 to 30169912 51 + TSS region transcription start site region 65658
Gm5113 7 30169922 to 30180209 10287 + protein coding gene predicted gene 5113
Tssr65659 7 30184160 to 30184181 21 + TSS region transcription start site region 65659
Cox7a1 7 30184171 to 30186030 1859 + protein coding gene cytochrome c oxidase subunit 7A1
Tssr65660 7 30184186 to 30184211 25 + TSS region transcription start site region 65660
Tssr65661 7 30184212 to 30184216 4 + TSS region transcription start site region 65661
Capns1 7 30186942 to 30198794 11852 - protein coding gene calpain, small subunit 1
Tssr71691 7 30187268 to 30187284 16 - TSS region transcription start site region 71691
Tssr71692 7 30187392 to 30187409 17 - TSS region transcription start site region 71692
Tssr71693 7 30187478 to 30187516 38 - TSS region transcription start site region 71693
Tssr71694 7 30190119 to 30190140 21 - TSS region transcription start site region 71694
Tssr71695 7 30190690 to 30190738 48 - TSS region transcription start site region 71695
Cpgi18781 7 30192839 to 30193029 190 CpG island CpG island 18781
Tssr71696 7 30192906 to 30192930 24 - TSS region transcription start site region 71696
Tssr71697 7 30192944 to 30192951 7 - TSS region transcription start site region 71697
Tssr71698 7 30192968 to 30192982 14 - TSS region transcription start site region 71698
Tssr71699 7 30193098 to 30193108 10 - TSS region transcription start site region 71699
Tssr71700 7 30193120 to 30193143 23 - TSS region transcription start site region 71700
Tssr71701 7 30193338 to 30193367 29 - TSS region transcription start site region 71701
Cpgi18782 7 30193787 to 30194041 254 CpG island CpG island 18782
Tssr71702 7 30193794 to 30193819 25 - TSS region transcription start site region 71702
Tssr65662 7 30193929 to 30193957 28 + TSS region transcription start site region 65662
Gm26810 7 30193954 to 30200889 6935 + antisense lncRNA gene predicted gene, 26810
Tssr71703 7 30194000 to 30194033 33 - TSS region transcription start site region 71703
Tssr71704 7 30194094 to 30194140 46 - TSS region transcription start site region 71704
Tssr71705 7 30194152 to 30194162 10 - TSS region transcription start site region 71705
Cpgi18783 7 30194479 to 30195316 837 CpG island CpG island 18783
Tssr71706 7 30195020 to 30195031 11 - TSS region transcription start site region 71706
Tssr71707 7 30195032 to 30195043 11 - TSS region transcription start site region 71707
Tssr71708 7 30195046 to 30195090 44 - TSS region transcription start site region 71708
Tssr71709 7 30195221 to 30195225 4 - TSS region transcription start site region 71709
Tssr71710 7 30195563 to 30195569 6 - TSS region transcription start site region 71710
Tssr71711 7 30198819 to 30198843 24 - TSS region transcription start site region 71711
Tssr71712 7 30198851 to 30198879 28 - TSS region transcription start site region 71712
Gm44600 7 30212628 to 30212738 110 - pseudogene predicted gene 44600
Cpgi18784 7 30216848 to 30217107 259 CpG island CpG island 18784
Tssr71713 7 30216926 to 30216933 7 - TSS region transcription start site region 71713
Tbcb 7 30224130 to 30232029 7899 - protein coding gene tubulin folding cofactor B
Cpgi18785 7 30231421 to 30233095 1674 CpG island CpG island 18785
Tssr71714 7 30231705 to 30231716 11 - TSS region transcription start site region 71714
Tssr71715 7 30231722 to 30231790 68 - TSS region transcription start site region 71715
Tssr65663 7 30231884 to 30231901 17 + TSS region transcription start site region 65663
Tssr65664 7 30232033 to 30232050 17 + TSS region transcription start site region 65664
Polr2i 7 30232074 to 30233387 1313 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide I
Tssr71716 7 30232186 to 30232205 19 - TSS region transcription start site region 71716
Tssr65665 7 30232310 to 30232350 40 + TSS region transcription start site region 65665
Ovol3 7 30233439 to 30235725 2286 - protein coding gene ovo like zinc finger 3
Wdr62 7 30240138 to 30280419 40281 - protein coding gene WD repeat domain 62
Tssr71717 7 30242863 to 30242871 8 - TSS region transcription start site region 71717
Tssr71718 7 30242875 to 30242882 7 - TSS region transcription start site region 71718
Tssr71719 7 30243499 to 30243535 36 - TSS region transcription start site region 71719
Tssr65666 7 30263174 to 30263179 5 + TSS region transcription start site region 65666
Rps12-ps5 7 30263263 to 30263651 388 + pseudogene ribosomal protein S12, pseudogene 5
Tssr71720 7 30263955 to 30263958 3 - TSS region transcription start site region 71720
Cpgi18786 7 30279736 to 30281020 1284 CpG island CpG island 18786
Tssr65667 7 30280087 to 30280142 55 + TSS region transcription start site region 65667
Thap8 7 30280094 to 30290237 10143 + protein coding gene THAP domain containing 8
Tssr65668 7 30280186 to 30280188 2 + TSS region transcription start site region 65668
Tssr71721 7 30280335 to 30280424 89 - TSS region transcription start site region 71721
Tssr65669 7 30280534 to 30280584 50 + TSS region transcription start site region 65669
Cpgi18787 7 30291516 to 30292020 504 CpG island CpG island 18787
Tssr65670 7 30291659 to 30291768 109 + TSS region transcription start site region 65670
Clip3 7 30291728 to 30308367 16639 + protein coding gene CAP-GLY domain containing linker protein 3
Tssr65671 7 30291771 to 30291779 8 + TSS region transcription start site region 65671
Tssr65672 7 30291784 to 30291787 3 + TSS region transcription start site region 65672
Tssr65673 7 30291803 to 30291807 4 + TSS region transcription start site region 65673
Tssr65674 7 30291916 to 30291939 23 + TSS region transcription start site region 65674
Tssr65675 7 30291941 to 30291968 27 + TSS region transcription start site region 65675
Tssr65676 7 30292001 to 30292012 11 + TSS region transcription start site region 65676
Tssr65677 7 30292145 to 30292169 24 + TSS region transcription start site region 65677
Tssr65678 7 30292258 to 30292303 45 + TSS region transcription start site region 65678
Cpgi18788 7 30297354 to 30297513 159 CpG island CpG island 18788
Tssr65679 7 30298943 to 30298960 17 + TSS region transcription start site region 65679
Tssr65680 7 30303469 to 30303482 13 + TSS region transcription start site region 65680
Tssr65681 7 30303906 to 30303926 20 + TSS region transcription start site region 65681
Tssr65682 7 30306835 to 30306853 18 + TSS region transcription start site region 65682
Tssr65683 7 30306856 to 30306879 23 + TSS region transcription start site region 65683
Tssr65684 7 30307060 to 30307101 41 + TSS region transcription start site region 65684
Tssr65685 7 30307111 to 30307129 18 + TSS region transcription start site region 65685
Tssr65686 7 30307147 to 30307169 22 + TSS region transcription start site region 65686
Tssr65687 7 30307207 to 30307230 23 + TSS region transcription start site region 65687
Tssr65688 7 30307233 to 30307278 45 + TSS region transcription start site region 65688
Tssr65689 7 30307316 to 30307354 38 + TSS region transcription start site region 65689
Tssr65690 7 30307361 to 30307378 17 + TSS region transcription start site region 65690
Tssr65691 7 30307663 to 30307676 13 + TSS region transcription start site region 65691
Tssr65692 7 30308266 to 30308277 11 + TSS region transcription start site region 65692
Cpgi18789 7 30308542 to 30309256 714 CpG island CpG island 18789
Tssr65693 7 30308741 to 30308758 17 + TSS region transcription start site region 65693
Alkbh6 7 30308753 to 30314303 5550 + protein coding gene alkB homolog 6
Tssr65694 7 30308760 to 30308771 11 + TSS region transcription start site region 65694
Tssr65695 7 30308772 to 30308818 46 + TSS region transcription start site region 65695
Gm24757 7 30311525 to 30311895 370 + unclassified non-coding RNA gene predicted gene, 24757
Cpgi18790 7 30314018 to 30314212 194 CpG island CpG island 18790
Tssr71722 7 30314174 to 30314185 11 - TSS region transcription start site region 71722
Tssr65696 7 30314810 to 30314870 60 + TSS region transcription start site region 65696
Syne4 7 30314816 to 30319045 4229 + protein coding gene spectrin repeat containing, nuclear envelope family member 4
Sdhaf1 7 30321409 to 30322375 966 - protein coding gene succinate dehydrogenase complex assembly factor 1
Cpgi18791 7 30321701 to 30322706 1005 CpG island CpG island 18791
E130208F15Rik 7 30321740 to 30323472 1732 + protein coding gene RIKEN cDNA E130208F15 gene
Tssr65697 7 30321753 to 30321774 21 + TSS region transcription start site region 65697
Tssr65698 7 30321777 to 30321822 45 + TSS region transcription start site region 65698
Tssr71723 7 30322293 to 30322370 77 - TSS region transcription start site region 71723
Tssr71724 7 30322378 to 30322392 14 - TSS region transcription start site region 71724
Tssr71725 7 30322409 to 30322418 9 - TSS region transcription start site region 71725
Tssr65699 7 30322555 to 30322569 14 + TSS region transcription start site region 65699
Tssr71726 7 30323020 to 30323030 10 - TSS region transcription start site region 71726
Tssr71727 7 30323035 to 30323049 14 - TSS region transcription start site region 71727
Cpgi18792 7 30327218 to 30327464 246 CpG island CpG island 18792
Tssr65700 7 30332228 to 30332238 10 + TSS region transcription start site region 65700
Cpgi18793 7 30332232 to 30332441 209 CpG island CpG island 18793
D7Mit246 7 30333060 to 30333196 136 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 246
Sle19 7 30333060 to 81485905 51152845 QTL systematic lupus erythematosus susceptibility 19
Femwf8 7 30333060 to 30333196 136 QTL femur work to failure 8
D7Dcr4 7 30333099 to 30333215 116 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 4
nmf206 7 30333196 to 3463212 -26869984 heritable phenotypic marker neuroscience mutagenesis facility, 206
4930479H17Rik 7 30347645 to 30353321 5676 - lincRNA gene RIKEN cDNA 4930479H17 gene
Cpgi18794 7 30347757 to 30348180 423 CpG island CpG island 18794
Tssr71728 7 30353335 to 30353344 9 - TSS region transcription start site region 71728
Tssr71729 7 30353346 to 30353360 14 - TSS region transcription start site region 71729
Lrfn3 7 30355514 to 30362772 7258 - protein coding gene leucine rich repeat and fibronectin type III domain containing 3
Cpgi18795 7 30355644 to 30356174 530 CpG island CpG island 18795
Gm25259 7 30356732 to 30356924 192 - snRNA gene predicted gene, 25259
Cpgi18796 7 30359387 to 30360855 1468 CpG island CpG island 18796
Tssr71730 7 30360417 to 30360424 7 - TSS region transcription start site region 71730
Tssr65701 7 30360602 to 30360603 1 + TSS region transcription start site region 65701
Cpgi18797 7 30362661 to 30363259 598 CpG island CpG island 18797
Tssr71731 7 30363090 to 30363137 47 - TSS region transcription start site region 71731
Cpgi18798 7 30373562 to 30373966 404 CpG island CpG island 18798
Gm42376 7 30392399 to 30398644 6245 - lncRNA gene predicted gene, 42376
Tssr71732 7 30394308 to 30394310 2 - TSS region transcription start site region 71732
Tssr2182 7 30394370 to 30394380 10 - TSS region transcription start site region 2182
Tssr71733 7 30394430 to 30394441 11 - TSS region transcription start site region 71733
Tssr71734 7 30394522 to 30394552 30 - TSS region transcription start site region 71734
Tssr71735 7 30394564 to 30394575 11 - TSS region transcription start site region 71735
Tssr2183 7 30394826 to 30394828 2 + TSS region transcription start site region 2183