Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29620834-30011418

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45978 7 29619477 to 29622580 3103 + protein coding gene predicted gene, 45978
n-R5s153 7 29657161 to 29657276 115 - rRNA gene nuclear encoded rRNA 5S 153
Catsperg2 7 29697219 to 29727032 29813 - protein coding gene cation channel sperm associated auxiliary subunit gamma 2
Tssr71675 7 29726966 to 29726985 19 - TSS region transcription start site region 71675
Tssr71676 7 29726991 to 29727007 16 - TSS region transcription start site region 71676
Gm23103 7 29737318 to 29737424 106 - snRNA gene predicted gene, 23103
Gm38983 7 29763788 to 29768417 4629 - lncRNA gene predicted gene, 38983
Gm44954 7 29764437 to 29764663 226 - pseudogene predicted gene 44954
Cpgi18762 7 29768462 to 29768989 527 CpG island CpG island 18762
Tssr65637 7 29768534 to 29768543 9 + TSS region transcription start site region 65637
Tssr65638 7 29768546 to 29768559 13 + TSS region transcription start site region 65638
Zfp84 7 29768552 to 29779821 11269 + protein coding gene zinc finger protein 84
Tssr65639 7 29768568 to 29768642 74 + TSS region transcription start site region 65639
Tssr65640 7 29768643 to 29768650 7 + TSS region transcription start site region 65640
Mir1964 7 29773294 to 29773376 82 + miRNA gene microRNA 1964
Eosn1 7 29781452 to 29781452 0 QTL eosinophil differential 1
Eosn3 7 29781452 to 29781452 0 QTL eosinophil differential 3
Cpgi18763 7 29783775 to 29784564 789 CpG island CpG island 18763
Tssr65641 7 29783958 to 29784028 70 + TSS region transcription start site region 65641
Zfp30 7 29783998 to 29794702 10704 + protein coding gene zinc finger protein 30
Cpgi18764 7 29792722 to 29793636 914 CpG island CpG island 18764
Gm6579 7 29798712 to 29799796 1084 - pseudogene predicted gene 6579
Tssr71677 7 29799871 to 29799879 8 - TSS region transcription start site region 71677
Cpgi18765 7 29815834 to 29816418 584 CpG island CpG island 18765
Tssr65642 7 29816061 to 29816153 92 + TSS region transcription start site region 65642
Zfp790 7 29816114 to 29831005 14891 + protein coding gene zinc finger protein 790
Zfp940 7 29843936 to 29853753 9817 - protein coding gene zinc finger protein 940
Gm26554 7 29853085 to 29858990 5905 + antisense lncRNA gene predicted gene, 26554
Cpgi18766 7 29853450 to 29853807 357 CpG island CpG island 18766
Tssr71678 7 29853595 to 29853609 14 - TSS region transcription start site region 71678
Tssr71679 7 29853611 to 29853683 72 - TSS region transcription start site region 71679
Gm17199 7 29855640 to 29856055 415 - pseudogene predicted gene 17199
Cpgi18767 7 29859883 to 29860338 455 CpG island CpG island 18767
Tssr65643 7 29859966 to 29860053 87 + TSS region transcription start site region 65643
Zfp420 7 29859979 to 29877292 17313 + protein coding gene zinc finger protein 420
Tssr65644 7 29860099 to 29860121 22 + TSS region transcription start site region 65644
D7Mit210 7 29863922 to 29864009 87 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 210
2900035I09Rik 7 29890155 to 29892587 2432 unclassified non-coding RNA gene RIKEN cDNA 2900035I09 gene
Zfp27 7 29893331 to 29906570 13239 - protein coding gene zinc finger protein 27
Cpgi18768 7 29894220 to 29894775 555 CpG island CpG island 18768
Tssr71680 7 29906087 to 29906137 50 - TSS region transcription start site region 71680
Cpgi18769 7 29906185 to 29906449 264 CpG island CpG island 18769
Mir7668 7 29906509 to 29906567 58 + miRNA gene microRNA 7668
Tssr71681 7 29906524 to 29906567 43 - TSS region transcription start site region 71681
Zfp383 7 29908281 to 29916813 8532 + protein coding gene zinc finger protein 383
Cpgi18770 7 29908335 to 29908784 449 CpG island CpG island 18770
Tssr65645 7 29908492 to 29908573 81 + TSS region transcription start site region 65645
D7Mit117 7 29926306 to 29926453 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 117
D7Dcr3 7 29926316 to 29926414 98 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 3
Gm44873 7 29926978 to 29930405 3427 + unclassified gene predicted gene 44873
Zfp74 7 29932661 to 29954441 21780 - protein coding gene zinc finger protein 74
Tssr65646 7 29941449 to 29941454 5 + TSS region transcription start site region 65646
Tssr65647 7 29941545 to 29941575 30 + TSS region transcription start site region 65647
Tssr71682 7 29943747 to 29943757 10 - TSS region transcription start site region 71682
Tssr65648 7 29943989 to 29944001 12 + TSS region transcription start site region 65648
Tssr65649 7 29944557 to 29944596 39 + TSS region transcription start site region 65649
Cpgi18771 7 29953465 to 29954132 667 CpG island CpG island 18771
Tssr71683 7 29953870 to 29953900 30 - TSS region transcription start site region 71683
Tssr71684 7 29954049 to 29954089 40 - TSS region transcription start site region 71684
C230062I16Rik 7 29960893 to 29969664 8771 + unclassified non-coding RNA gene RIKEN cDNA C230062I16 gene
Gm10169 7 29965218 to 29965565 347 - pseudogene predicted pseudogene 10169
Gm31735 7 29970602 to 29983761 13159 - lncRNA gene predicted gene, 31735
Tssr65650 7 29982122 to 29982133 11 + TSS region transcription start site region 65650
Cpgi18772 7 29983575 to 29984469 894 CpG island CpG island 18772
Tssr65651 7 29983917 to 29983942 25 + TSS region transcription start site region 65651
Tssr65652 7 29983948 to 29983964 16 + TSS region transcription start site region 65652
Zfp568 7 29983955 to 30028282 44327 + protein coding gene zinc finger protein 568
Tssr65653 7 29983976 to 29983988 12 + TSS region transcription start site region 65653