Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29290563-29720579

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r14a 7 29289320 to 29293390 4070 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 14A
Tssr65622 7 29291369 to 29291386 17 + TSS region transcription start site region 65622
Tssr65623 7 29296631 to 29296634 3 + TSS region transcription start site region 65623
Tssr65624 7 29298288 to 29298290 2 + TSS region transcription start site region 65624
Cpgi18756 7 29303614 to 29305389 1775 CpG island CpG island 18756
Tssr65625 7 29303938 to 29303947 9 + TSS region transcription start site region 65625
Tssr65626 7 29303958 to 29303983 25 + TSS region transcription start site region 65626
Dpf1 7 29303959 to 29317592 13633 + protein coding gene D4, zinc and double PHD fingers family 1
Tssr65627 7 29303987 to 29304003 16 + TSS region transcription start site region 65627
Tssr65628 7 29304010 to 29304013 3 + TSS region transcription start site region 65628
Cpgi18757 7 29307457 to 29308426 969 CpG island CpG island 18757
Tssr65629 7 29307974 to 29308057 83 + TSS region transcription start site region 65629
Cpgi18758 7 29309215 to 29309903 688 CpG island CpG island 18758
Tssr65630 7 29309429 to 29309462 33 + TSS region transcription start site region 65630
Gm44632 7 29316770 to 29319402 2632 - antisense lncRNA gene predicted gene 44632
Tssr65631 7 29317287 to 29317296 9 + TSS region transcription start site region 65631
Cpgi18759 7 29318648 to 29318953 305 CpG island CpG island 18759
Sipa1l3 7 29320372 to 29518641 198269 - protein coding gene signal-induced proliferation-associated 1 like 3
Tssr71651 7 29339188 to 29339203 15 - TSS region transcription start site region 71651
Tssr71652 7 29339216 to 29339252 36 - TSS region transcription start site region 71652
Tssr71653 7 29344844 to 29344860 16 - TSS region transcription start site region 71653
Tssr71654 7 29344900 to 29344916 16 - TSS region transcription start site region 71654
Tssr71655 7 29354282 to 29354299 17 - TSS region transcription start site region 71655
Tssr71656 7 29354306 to 29354338 32 - TSS region transcription start site region 71656
Cpgi18760 7 29397066 to 29397283 217 CpG island CpG island 18760
Tssr71657 7 29397678 to 29397709 31 - TSS region transcription start site region 71657
D7Mit116 7 29432519 to 29432601 82 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 116
Tssr71658 7 29443550 to 29443552 2 - TSS region transcription start site region 71658
Tssr65632 7 29446385 to 29446394 9 + TSS region transcription start site region 65632
Tssr71659 7 29481614 to 29481621 7 - TSS region transcription start site region 71659
Tssr71660 7 29505333 to 29505445 112 - TSS region transcription start site region 71660
Tssr71661 7 29505447 to 29505473 26 - TSS region transcription start site region 71661
Tssr71662 7 29505563 to 29505579 16 - TSS region transcription start site region 71662
Tssr71663 7 29505728 to 29505748 20 - TSS region transcription start site region 71663
Tssr71664 7 29505754 to 29505765 11 - TSS region transcription start site region 71664
Tssr71665 7 29505775 to 29505790 15 - TSS region transcription start site region 71665
Tssr71666 7 29505792 to 29505822 30 - TSS region transcription start site region 71666
Tssr71667 7 29505914 to 29505917 3 - TSS region transcription start site region 71667
Cpgi18761 7 29518043 to 29519691 1648 CpG island CpG island 18761
Tssr71668 7 29518536 to 29518541 5 - TSS region transcription start site region 71668
Tssr71669 7 29518542 to 29518565 23 - TSS region transcription start site region 71669
Tssr71670 7 29518566 to 29518620 54 - TSS region transcription start site region 71670
Tssr65633 7 29519146 to 29519156 10 + TSS region transcription start site region 65633
Tssr65634 7 29519158 to 29519169 11 + TSS region transcription start site region 65634
4932431P20Rik 7 29524543 to 29538055 13512 + pseudogene RIKEN cDNA 4932431P20 gene
Tssr65635 7 29534407 to 29534414 7 + TSS region transcription start site region 65635
Tssr65636 7 29535030 to 29535063 33 + TSS region transcription start site region 65636
Spmo2 7 29546946 to 29547137 191 QTL sperm mobility 2
D7Mit267 7 29546946 to 29547137 191 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 267
ru2l 7 29546946 to 49509583 19962637 heritable phenotypic marker ruby-eye 2-like
4930544L20Rik 7 29552159 to 29553027 868 unclassified gene RIKEN cDNA 4930544L20 gene
Gm38982 7 29553467 to 29555628 2161 - lncRNA gene predicted gene, 38982
Tssr71671 7 29555588 to 29555598 10 - TSS region transcription start site region 71671
Tssr71672 7 29555599 to 29555614 15 - TSS region transcription start site region 71672
Tssr71673 7 29555638 to 29555647 9 - TSS region transcription start site region 71673
Tssr71674 7 29556516 to 29556519 3 - TSS region transcription start site region 71674
4930432E11Rik 7 29556615 to 29576779 20164 + pseudogene RIKEN cDNA 4930432E11 gene
Gm29326 7 29560365 to 29562815 2450 - lincRNA gene predicted gene 29326
A330087D11Rik 7 29568903 to 29573928 5025 - lincRNA gene RIKEN cDNA A330087D11 gene
Gm45978 7 29619477 to 29622580 3103 + protein coding gene predicted gene, 45978
n-R5s153 7 29657161 to 29657276 115 - rRNA gene nuclear encoded rRNA 5S 153
Catsperg2 7 29697219 to 29727032 29813 - protein coding gene cation channel sperm associated auxiliary subunit gamma 2