Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29248288-29348290

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2200002D01Rik 7 29247521 to 29248467 946 - protein coding gene RIKEN cDNA 2200002D01 gene
Tssr71639 7 29248375 to 29248424 49 - TSS region transcription start site region 71639
Tssr71640 7 29248457 to 29248468 11 - TSS region transcription start site region 71640
Tssr71641 7 29248511 to 29248533 22 - TSS region transcription start site region 71641
Spint2 7 29256323 to 29281912 25589 - protein coding gene serine protease inhibitor, Kunitz type 2
Tssr71642 7 29256412 to 29256416 4 - TSS region transcription start site region 71642
Tssr71643 7 29256491 to 29256594 103 - TSS region transcription start site region 71643
Tssr71644 7 29258540 to 29258575 35 - TSS region transcription start site region 71644
Cpgi18754 7 29281206 to 29282372 1166 CpG island CpG island 18754
Tssr2177 7 29281580 to 29281595 15 - TSS region transcription start site region 2177
Tssr71645 7 29281616 to 29281688 72 - TSS region transcription start site region 71645
Tssr2178 7 29281769 to 29281784 15 - TSS region transcription start site region 2178
Tssr2179 7 29281821 to 29281892 71 - TSS region transcription start site region 2179
Tssr2180 7 29281900 to 29281904 4 - TSS region transcription start site region 2180
Tssr71646 7 29281914 to 29281935 21 - TSS region transcription start site region 71646
Tssr71647 7 29281938 to 29281973 35 - TSS region transcription start site region 71647
Tssr71648 7 29281979 to 29281990 11 - TSS region transcription start site region 71648
Tssr71649 7 29282033 to 29282040 7 - TSS region transcription start site region 71649
Gm45977 7 29283576 to 29288356 4780 - lncRNA gene predicted gene, 45977
Tssr71650 7 29288259 to 29288305 46 - TSS region transcription start site region 71650
Cpgi18755 7 29288992 to 29289795 803 CpG island CpG island 18755
Tssr65619 7 29289278 to 29289285 7 + TSS region transcription start site region 65619
Tssr65620 7 29289300 to 29289324 24 + TSS region transcription start site region 65620
Ppp1r14a 7 29289320 to 29293390 4070 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 14A
Tssr65621 7 29289327 to 29289338 11 + TSS region transcription start site region 65621
Tssr65622 7 29291369 to 29291386 17 + TSS region transcription start site region 65622
Tssr65623 7 29296631 to 29296634 3 + TSS region transcription start site region 65623
Tssr65624 7 29298288 to 29298290 2 + TSS region transcription start site region 65624
Cpgi18756 7 29303614 to 29305389 1775 CpG island CpG island 18756
Tssr65625 7 29303938 to 29303947 9 + TSS region transcription start site region 65625
Tssr65626 7 29303958 to 29303983 25 + TSS region transcription start site region 65626
Dpf1 7 29303959 to 29317592 13633 + protein coding gene D4, zinc and double PHD fingers family 1
Tssr65627 7 29303987 to 29304003 16 + TSS region transcription start site region 65627
Tssr65628 7 29304010 to 29304013 3 + TSS region transcription start site region 65628
Cpgi18757 7 29307457 to 29308426 969 CpG island CpG island 18757
Tssr65629 7 29307974 to 29308057 83 + TSS region transcription start site region 65629
Cpgi18758 7 29309215 to 29309903 688 CpG island CpG island 18758
Tssr65630 7 29309429 to 29309462 33 + TSS region transcription start site region 65630
Gm44632 7 29316770 to 29319402 2632 - antisense lncRNA gene predicted gene 44632
Tssr65631 7 29317287 to 29317296 9 + TSS region transcription start site region 65631
Cpgi18759 7 29318648 to 29318953 305 CpG island CpG island 18759
Sipa1l3 7 29320372 to 29518641 198269 - protein coding gene signal-induced proliferation-associated 1 like 3
Tssr71651 7 29339188 to 29339203 15 - TSS region transcription start site region 71651
Tssr71652 7 29339216 to 29339252 36 - TSS region transcription start site region 71652
Tssr71653 7 29344844 to 29344860 16 - TSS region transcription start site region 71653
Tssr71654 7 29344900 to 29344916 16 - TSS region transcription start site region 71654