Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28825114-28965119

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18723 7 28825131 to 28825493 362 CpG island CpG island 18723
Tssr65547 7 28825202 to 28825215 13 + TSS region transcription start site region 65547
Tssr65548 7 28825273 to 28825285 12 + TSS region transcription start site region 65548
Tssr65549 7 28825301 to 28825314 13 + TSS region transcription start site region 65549
Tssr65550 7 28825318 to 28825363 45 + TSS region transcription start site region 65550
Ech1 7 28825338 to 28832239 6901 + protein coding gene enoyl coenzyme A hydratase 1, peroxisomal
Tssr65551 7 28827522 to 28827524 2 + TSS region transcription start site region 65551
Tssr65552 7 28827631 to 28827632 1 + TSS region transcription start site region 65552
Tssr65553 7 28830007 to 28830028 21 + TSS region transcription start site region 65553
Tssr65554 7 28830087 to 28830092 5 + TSS region transcription start site region 65554
Tssr65555 7 28830107 to 28830137 30 + TSS region transcription start site region 65555
Tssr65556 7 28830142 to 28830156 14 + TSS region transcription start site region 65556
Tssr65557 7 28831375 to 28831389 14 + TSS region transcription start site region 65557
Tssr65558 7 28832378 to 28832392 14 + TSS region transcription start site region 65558
Lgals4 7 28833854 to 28841708 7854 + protein coding gene lectin, galactose binding, soluble 4
Tssr65559 7 28833967 to 28833984 17 + TSS region transcription start site region 65559
Tssr65560 7 28834004 to 28834014 10 + TSS region transcription start site region 65560
Tssr65561 7 28834024 to 28834030 6 + TSS region transcription start site region 65561
Tssr65562 7 28834038 to 28834049 11 + TSS region transcription start site region 65562
Tssr65563 7 28834054 to 28834060 6 + TSS region transcription start site region 65563
Tssr65564 7 28834068 to 28834074 6 + TSS region transcription start site region 65564
Tssr65565 7 28834087 to 28834115 28 + TSS region transcription start site region 65565
Tssr65566 7 28834125 to 28834146 21 + TSS region transcription start site region 65566
Tssr65567 7 28834168 to 28834171 3 + TSS region transcription start site region 65567
Tssr65568 7 28834477 to 28834505 28 + TSS region transcription start site region 65568
Tssr65569 7 28835859 to 28835875 16 + TSS region transcription start site region 65569
Tssr65570 7 28835896 to 28835922 26 + TSS region transcription start site region 65570
Tssr65571 7 28836642 to 28836646 4 + TSS region transcription start site region 65571
Tssr65572 7 28837556 to 28837562 6 + TSS region transcription start site region 65572
Tssr2174 7 28838697 to 28838736 39 + TSS region transcription start site region 2174
Tssr65573 7 28841606 to 28841625 19 + TSS region transcription start site region 65573
Tssr65574 7 28863831 to 28863835 4 + TSS region transcription start site region 65574
Lgals7 7 28863853 to 28866284 2431 + protein coding gene lectin, galactose binding, soluble 7
Tssr65575 7 28864445 to 28864460 15 + TSS region transcription start site region 65575
Cpgi18724 7 28865993 to 28866298 305 CpG island CpG island 18724
Tssr65576 7 28866224 to 28866255 31 + TSS region transcription start site region 65576
Cpgi18725 7 28867234 to 28867543 309 CpG island CpG island 18725
Gm10648 7 28870545 to 28876334 5789 - antisense lncRNA gene predicted gene 10648
Capn12 7 28881450 to 28893585 12135 + protein coding gene calpain 12
Tssr65577 7 28881710 to 28881718 8 + TSS region transcription start site region 65577
Gm44700 7 28887127 to 28888483 1356 - antisense lncRNA gene predicted gene 44700
Cpgi18726 7 28888193 to 28889145 952 CpG island CpG island 18726
Actn4 7 28893248 to 28962340 69092 - protein coding gene actinin alpha 4
Tssr2175 7 28893701 to 28893708 7 - TSS region transcription start site region 2175
Tssr71582 7 28893738 to 28893763 25 - TSS region transcription start site region 71582
Tssr71583 7 28893839 to 28893850 11 - TSS region transcription start site region 71583
Tssr71584 7 28893980 to 28893992 12 - TSS region transcription start site region 71584
Tssr71585 7 28894145 to 28894183 38 - TSS region transcription start site region 71585
Tssr71586 7 28894345 to 28894361 16 - TSS region transcription start site region 71586
Tssr71587 7 28895012 to 28895034 22 - TSS region transcription start site region 71587
Tssr65578 7 28895114 to 28895119 5 + TSS region transcription start site region 65578
Tssr65579 7 28895177 to 28895190 13 + TSS region transcription start site region 65579
Tssr65580 7 28895219 to 28895228 9 + TSS region transcription start site region 65580
Tssr65581 7 28895237 to 28895257 20 + TSS region transcription start site region 65581
Tssr71588 7 28898098 to 28898132 34 - TSS region transcription start site region 71588
Tssr71589 7 28907294 to 28907299 5 - TSS region transcription start site region 71589
Tssr71590 7 28907349 to 28907367 18 - TSS region transcription start site region 71590
Tssr71591 7 28907375 to 28907392 17 - TSS region transcription start site region 71591
Gm44699 7 28920951 to 28943528 22577 - sense intronic lncRNA gene predicted gene 44699
Tssr71592 7 28925414 to 28925418 4 - TSS region transcription start site region 71592
Gm38978 7 28927421 to 28932124 4703 + lncRNA gene predicted gene, 38978
Tssr65582 7 28931715 to 28931717 2 + TSS region transcription start site region 65582
Tssr71593 7 28948806 to 28948818 12 - TSS region transcription start site region 71593
Tssr71594 7 28949653 to 28949660 7 - TSS region transcription start site region 71594
Tssr71595 7 28949670 to 28949679 9 - TSS region transcription start site region 71595
Tssr71596 7 28958178 to 28958182 4 - TSS region transcription start site region 71596
Cpgi18727 7 28961667 to 28963048 1381 CpG island CpG island 18727
Tssr71597 7 28962236 to 28962247 11 - TSS region transcription start site region 71597
Tssr71598 7 28962265 to 28962310 45 - TSS region transcription start site region 71598
Tssr71599 7 28962326 to 28962337 11 - TSS region transcription start site region 71599
Tssr2176 7 28962512 to 28962533 21 + TSS region transcription start site region 2176