Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28554792-28704802

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pak4 7 28558819 to 28598184 39365 - protein coding gene p21 (RAC1) activated kinase 4
Mir7049 7 28560925 to 28560984 59 - miRNA gene microRNA 7049
Tssr71544 7 28561044 to 28561054 10 - TSS region transcription start site region 71544
Tssr71545 7 28561101 to 28561112 11 - TSS region transcription start site region 71545
Tssr71546 7 28561683 to 28561694 11 - TSS region transcription start site region 71546
Cpgi18711 7 28562511 to 28562727 216 CpG island CpG island 18711
Tssr71547 7 28576656 to 28576689 33 - TSS region transcription start site region 71547
Tssr65492 7 28597189 to 28597196 7 + TSS region transcription start site region 65492
Cpgi18712 7 28597756 to 28598434 678 CpG island CpG island 18712
Tssr71548 7 28598140 to 28598176 36 - TSS region transcription start site region 71548
Acp7 7 28607634 to 28631332 23698 - protein coding gene acid phosphatase 7, tartrate resistant
Cpgi18713 7 28616998 to 28617268 270 CpG island CpG island 18713
Gm44618 7 28629248 to 28681936 52688 + lincRNA gene predicted gene 44618
Tssr71549 7 28629694 to 28629713 19 - TSS region transcription start site region 71549
Tssr71550 7 28629722 to 28629741 19 - TSS region transcription start site region 71550
Tssr71551 7 28629752 to 28629763 11 - TSS region transcription start site region 71551
Tssr71552 7 28629792 to 28629802 10 - TSS region transcription start site region 71552
Tssr65493 7 28629921 to 28629929 8 + TSS region transcription start site region 65493
Cpgi18714 7 28630257 to 28630913 656 CpG island CpG island 18714
Tssr71553 7 28630501 to 28630512 11 - TSS region transcription start site region 71553
Tssr71554 7 28630897 to 28630920 23 - TSS region transcription start site region 71554
Tssr71555 7 28631586 to 28631594 8 - TSS region transcription start site region 71555
Gm44617 7 28640443 to 28645671 5228 + unclassified non-coding RNA gene predicted gene 44617
Tssr71556 7 28646771 to 28646780 9 - TSS region transcription start site region 71556
Tssr65494 7 28692816 to 28692834 18 + TSS region transcription start site region 65494
Fbxo27 7 28692849 to 28699338 6489 + protein coding gene F-box protein 27
Tssr65495 7 28692855 to 28692870 15 + TSS region transcription start site region 65495
Tssr65496 7 28693003 to 28693010 7 + TSS region transcription start site region 65496
Tssr65497 7 28693012 to 28693021 9 + TSS region transcription start site region 65497
Tssr65498 7 28693032 to 28693043 11 + TSS region transcription start site region 65498
Cpgi18715 7 28693059 to 28693751 692 CpG island CpG island 18715
Tssr65499 7 28693997 to 28694012 15 + TSS region transcription start site region 65499
Tssr71557 7 28695255 to 28695272 17 - TSS region transcription start site region 71557