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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28463078-28593087

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrfn1 7 28451985 to 28468242 16257 + protein coding gene leucine rich repeat and fibronectin type III domain containing 1
Cpgi18706 7 28466563 to 28467957 1394 CpG island CpG island 18706
Tssr65486 7 28467899 to 28467902 3 + TSS region transcription start site region 65486
Gm6518 7 28477327 to 28477852 525 - pseudogene predicted gene 6518
Cpgi18707 7 28490783 to 28491123 340 CpG island CpG island 18707
1700028B04Rik 7 28496941 to 28497492 551 + pseudogene RIKEN cDNA 1700028B04 gene
Cpgi18708 7 28497090 to 28497359 269 CpG island CpG island 18708
Ifnl2 7 28508836 to 28510455 1619 - protein coding gene interferon lambda 2
Ifnl3 7 28522836 to 28524322 1486 + protein coding gene interferon lambda 3
Tssr71536 7 28528078 to 28528087 9 - TSS region transcription start site region 71536
Gm19880 7 28534772 to 28535089 317 + pseudogene predicted gene, 19880
Tssr65487 7 28540718 to 28540728 10 + TSS region transcription start site region 65487
Tssr2170 7 28540819 to 28540833 14 + TSS region transcription start site region 2170
Tssr65488 7 28540863 to 28540886 23 + TSS region transcription start site region 65488
Sycn 7 28540885 to 28542209 1324 + protein coding gene syncollin
Tssr65489 7 28540894 to 28540906 12 + TSS region transcription start site region 65489
Tssr2171 7 28541003 to 28541021 18 + TSS region transcription start site region 2171
Nccrp1 7 28543596 to 28547254 3658 - protein coding gene non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
Tssr65490 7 28543927 to 28543944 17 + TSS region transcription start site region 65490
Tssr65491 7 28543982 to 28544013 31 + TSS region transcription start site region 65491
Tssr71537 7 28543982 to 28544001 19 - TSS region transcription start site region 71537
Tssr71538 7 28544038 to 28544062 24 - TSS region transcription start site region 71538
Cpgi18709 7 28544101 to 28544685 584 CpG island CpG island 18709
Tssr71539 7 28544129 to 28544141 12 - TSS region transcription start site region 71539
Tssr71540 7 28544228 to 28544240 12 - TSS region transcription start site region 71540
Tssr71541 7 28544441 to 28544452 11 - TSS region transcription start site region 71541
Cpgi18710 7 28546706 to 28547105 399 CpG island CpG island 18710
Tssr71542 7 28547043 to 28547087 44 - TSS region transcription start site region 71542
Tssr71543 7 28547109 to 28547120 11 - TSS region transcription start site region 71543
Gm38977 7 28547766 to 28550229 2463 + lncRNA gene predicted gene, 38977
Pak4 7 28558819 to 28598184 39365 - protein coding gene p21 (RAC1) activated kinase 4
Mir7049 7 28560925 to 28560984 59 - miRNA gene microRNA 7049
Tssr71544 7 28561044 to 28561054 10 - TSS region transcription start site region 71544
Tssr71545 7 28561101 to 28561112 11 - TSS region transcription start site region 71545
Tssr71546 7 28561683 to 28561694 11 - TSS region transcription start site region 71546
Cpgi18711 7 28562511 to 28562727 216 CpG island CpG island 18711
Tssr71547 7 28576656 to 28576689 33 - TSS region transcription start site region 71547