Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28298056-28379136

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dll3 7 28293555 to 28301785 8230 - protein coding gene delta like canonical Notch ligand 3
Cpgi18691 7 28298530 to 28299250 720 CpG island CpG island 18691
D7Mit266 7 28301044 to 28301161 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 266
Cpgi18692 7 28301168 to 28301603 435 CpG island CpG island 18692
Tssr71467 7 28301772 to 28301791 19 - TSS region transcription start site region 71467
Tssr2162 7 28302199 to 28302214 15 - TSS region transcription start site region 2162
Timm50 7 28305516 to 28312046 6530 - protein coding gene translocase of inner mitochondrial membrane 50
Tssr71468 7 28310387 to 28310417 30 - TSS region transcription start site region 71468
Cpgi18693 7 28311371 to 28312360 989 CpG island CpG island 18693
Tssr71469 7 28312027 to 28312061 34 - TSS region transcription start site region 71469
Supt5 7 28314891 to 28338746 23855 - protein coding gene suppressor of Ty 5
Gm44709 7 28314898 to 28318873 3975 + antisense lncRNA gene predicted gene 44709
Tssr65457 7 28316396 to 28316411 15 + TSS region transcription start site region 65457
Tssr71470 7 28316810 to 28316822 12 - TSS region transcription start site region 71470
Tssr71471 7 28318880 to 28318896 16 - TSS region transcription start site region 71471
Tssr71472 7 28318918 to 28318959 41 - TSS region transcription start site region 71472
Tssr71473 7 28331506 to 28331541 35 - TSS region transcription start site region 71473
Cpgi18694 7 28338056 to 28339136 1080 CpG island CpG island 18694
Tssr71474 7 28338427 to 28338461 34 - TSS region transcription start site region 71474
Tssr71475 7 28338704 to 28338715 11 - TSS region transcription start site region 71475
Tssr71476 7 28338722 to 28338784 62 - TSS region transcription start site region 71476
Cpgi18695 7 28350258 to 28351342 1084 CpG island CpG island 18695
Tssr71477 7 28350465 to 28350476 11 - TSS region transcription start site region 71477
Tssr71478 7 28350526 to 28350563 37 - TSS region transcription start site region 71478
Rps16 7 28350689 to 28352698 2009 + protein coding gene ribosomal protein S16
Tssr65458 7 28350740 to 28350762 22 + TSS region transcription start site region 65458
AF357399 7 28351540 to 28351633 93 + snoRNA gene snoRNA AF357399
Plekhg2 7 28359604 to 28372599 12995 - protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 2
Tssr71479 7 28367660 to 28367665 5 - TSS region transcription start site region 71479
Tssr71480 7 28367712 to 28367722 10 - TSS region transcription start site region 71480
Cpgi18696 7 28371417 to 28373126 1709 CpG island CpG island 18696
Tssr71481 7 28372340 to 28372371 31 - TSS region transcription start site region 71481
Tssr71482 7 28372510 to 28372519 9 - TSS region transcription start site region 71482
Tssr71483 7 28372534 to 28372547 13 - TSS region transcription start site region 71483
Tssr71484 7 28372548 to 28372557 9 - TSS region transcription start site region 71484
Tssr71485 7 28372563 to 28372583 20 - TSS region transcription start site region 71485
Tssr71486 7 28372597 to 28372610 13 - TSS region transcription start site region 71486
Tssr71487 7 28372630 to 28372637 7 - TSS region transcription start site region 71487
Tssr71488 7 28372657 to 28372666 9 - TSS region transcription start site region 71488
Tssr65459 7 28372930 to 28372971 41 + TSS region transcription start site region 65459
n-TIaat16 7 28372999 to 28373093 94 + tRNA gene nuclear encoded tRNA isoleucine 16 (anticodon TAT)
Tssr71489 7 28375522 to 28375584 62 - TSS region transcription start site region 71489
Cpgi18697 7 28375602 to 28375917 315 CpG island CpG island 18697
Tssr65460 7 28375770 to 28375792 22 + TSS region transcription start site region 65460
Tssr65461 7 28376525 to 28376563 38 + TSS region transcription start site region 65461
Tssr65462 7 28376726 to 28376738 12 + TSS region transcription start site region 65462
Zfp36 7 28376784 to 28379228 2444 - protein coding gene zinc finger protein 36
Tssr71490 7 28376970 to 28376994 24 - TSS region transcription start site region 71490
Tssr71491 7 28377074 to 28377091 17 - TSS region transcription start site region 71491
Tssr71492 7 28377130 to 28377169 39 - TSS region transcription start site region 71492
Tssr71493 7 28377174 to 28377219 45 - TSS region transcription start site region 71493
Tssr71494 7 28377221 to 28377254 33 - TSS region transcription start site region 71494
Tssr71495 7 28377266 to 28377284 18 - TSS region transcription start site region 71495
Tssr65463 7 28377486 to 28377495 9 + TSS region transcription start site region 65463
Tssr71496 7 28377617 to 28377631 14 - TSS region transcription start site region 71496
Tssr71497 7 28377865 to 28377879 14 - TSS region transcription start site region 71497
Cpgi18698 7 28377899 to 28378599 700 CpG island CpG island 18698
Tssr71498 7 28377923 to 28377940 17 - TSS region transcription start site region 71498
Tssr65464 7 28377996 to 28378053 57 + TSS region transcription start site region 65464
Tssr71499 7 28378016 to 28378034 18 - TSS region transcription start site region 71499
Tssr71500 7 28378049 to 28378058 9 - TSS region transcription start site region 71500
Tssr71501 7 28378067 to 28378085 18 - TSS region transcription start site region 71501
Tssr71502 7 28378107 to 28378110 3 - TSS region transcription start site region 71502
Tssr71503 7 28378143 to 28378151 8 - TSS region transcription start site region 71503
Tssr71504 7 28378171 to 28378182 11 - TSS region transcription start site region 71504
Tssr71505 7 28378187 to 28378199 12 - TSS region transcription start site region 71505
Tssr71506 7 28378206 to 28378213 7 - TSS region transcription start site region 71506
Tssr71507 7 28378247 to 28378260 13 - TSS region transcription start site region 71507
Tssr71508 7 28378269 to 28378294 25 - TSS region transcription start site region 71508
Tssr71509 7 28378307 to 28378354 47 - TSS region transcription start site region 71509
Tssr71510 7 28378386 to 28378398 12 - TSS region transcription start site region 71510
Tssr71511 7 28378425 to 28378434 9 - TSS region transcription start site region 71511
Tssr71512 7 28378480 to 28378514 34 - TSS region transcription start site region 71512
Cpgi18699 7 28378747 to 28379497 750 CpG island CpG island 18699
Gm44710 7 28378980 to 28392514 13534 + antisense lncRNA gene predicted gene 44710
Tssr71513 7 28379096 to 28379101 5 - TSS region transcription start site region 71513