Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28180695-28400721

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135 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dyrk1b 7 28179469 to 28187294 7825 + protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
Tssr65453 7 28187580 to 28187584 4 + TSS region transcription start site region 65453
Cpgi18686 7 28208925 to 28209131 206 CpG island CpG island 18686
Gm45011 7 28226358 to 28228654 2296 + unclassified gene predicted gene 45011
Gm18672 7 28235651 to 28235920 269 - pseudogene predicted gene, 18672
Gm38591 7 28243022 to 28243753 731 - protein coding gene predicted gene, 38591
Cpgi18687 7 28267656 to 28268824 1168 CpG island CpG island 18687
Tssr65454 7 28267797 to 28267808 11 + TSS region transcription start site region 65454
Tssr65455 7 28267809 to 28267932 123 + TSS region transcription start site region 65455
Eid2 7 28267881 to 28269168 1287 + protein coding gene EP300 interacting inhibitor of differentiation 2
Cpgi18688 7 28277578 to 28278563 985 CpG island CpG island 18688
Tssr65456 7 28277717 to 28277770 53 + TSS region transcription start site region 65456
Eid2b 7 28277739 to 28279489 1750 + protein coding gene EP300 interacting inhibitor of differentiation 2B
Selenov 7 28284652 to 28291134 6482 - protein coding gene selenoprotein V
Cpgi18689 7 28290252 to 28291443 1191 CpG island CpG island 18689
Tssr71461 7 28290695 to 28290721 26 - TSS region transcription start site region 71461
Tssr71462 7 28291105 to 28291112 7 - TSS region transcription start site region 71462
Tssr71463 7 28291117 to 28291128 11 - TSS region transcription start site region 71463
Tssr71464 7 28291130 to 28291164 34 - TSS region transcription start site region 71464
Dll3 7 28293555 to 28301785 8230 - protein coding gene delta like canonical Notch ligand 3
Cpgi18690 7 28294000 to 28295203 1203 CpG island CpG island 18690
Tssr71465 7 28294574 to 28294602 28 - TSS region transcription start site region 71465
Tssr71466 7 28294609 to 28294670 61 - TSS region transcription start site region 71466
Cpgi18691 7 28298530 to 28299250 720 CpG island CpG island 18691
D7Mit266 7 28301044 to 28301161 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 266
Cpgi18692 7 28301168 to 28301603 435 CpG island CpG island 18692
Tssr71467 7 28301772 to 28301791 19 - TSS region transcription start site region 71467
Tssr2162 7 28302199 to 28302214 15 - TSS region transcription start site region 2162
Timm50 7 28305516 to 28312046 6530 - protein coding gene translocase of inner mitochondrial membrane 50
Tssr71468 7 28310387 to 28310417 30 - TSS region transcription start site region 71468
Cpgi18693 7 28311371 to 28312360 989 CpG island CpG island 18693
Tssr71469 7 28312027 to 28312061 34 - TSS region transcription start site region 71469
Supt5 7 28314891 to 28338746 23855 - protein coding gene suppressor of Ty 5
Gm44709 7 28314898 to 28318873 3975 + antisense lncRNA gene predicted gene 44709
Tssr65457 7 28316396 to 28316411 15 + TSS region transcription start site region 65457
Tssr71470 7 28316810 to 28316822 12 - TSS region transcription start site region 71470
Tssr71471 7 28318880 to 28318896 16 - TSS region transcription start site region 71471
Tssr71472 7 28318918 to 28318959 41 - TSS region transcription start site region 71472
Tssr71473 7 28331506 to 28331541 35 - TSS region transcription start site region 71473
Cpgi18694 7 28338056 to 28339136 1080 CpG island CpG island 18694
Tssr71474 7 28338427 to 28338461 34 - TSS region transcription start site region 71474
Tssr71475 7 28338704 to 28338715 11 - TSS region transcription start site region 71475
Tssr71476 7 28338722 to 28338784 62 - TSS region transcription start site region 71476
Cpgi18695 7 28350258 to 28351342 1084 CpG island CpG island 18695
Tssr71477 7 28350465 to 28350476 11 - TSS region transcription start site region 71477
Tssr71478 7 28350526 to 28350563 37 - TSS region transcription start site region 71478
Rps16 7 28350689 to 28352698 2009 + protein coding gene ribosomal protein S16
Tssr65458 7 28350740 to 28350762 22 + TSS region transcription start site region 65458
AF357399 7 28351540 to 28351633 93 + snoRNA gene snoRNA AF357399
Plekhg2 7 28359604 to 28372599 12995 - protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 2
Tssr71479 7 28367660 to 28367665 5 - TSS region transcription start site region 71479
Tssr71480 7 28367712 to 28367722 10 - TSS region transcription start site region 71480
Cpgi18696 7 28371417 to 28373126 1709 CpG island CpG island 18696
Tssr71481 7 28372340 to 28372371 31 - TSS region transcription start site region 71481
Tssr71482 7 28372510 to 28372519 9 - TSS region transcription start site region 71482
Tssr71483 7 28372534 to 28372547 13 - TSS region transcription start site region 71483
Tssr71484 7 28372548 to 28372557 9 - TSS region transcription start site region 71484
Tssr71485 7 28372563 to 28372583 20 - TSS region transcription start site region 71485
Tssr71486 7 28372597 to 28372610 13 - TSS region transcription start site region 71486
Tssr71487 7 28372630 to 28372637 7 - TSS region transcription start site region 71487
Tssr71488 7 28372657 to 28372666 9 - TSS region transcription start site region 71488
Tssr65459 7 28372930 to 28372971 41 + TSS region transcription start site region 65459
n-TIaat16 7 28372999 to 28373093 94 + tRNA gene nuclear encoded tRNA isoleucine 16 (anticodon TAT)
Tssr71489 7 28375522 to 28375584 62 - TSS region transcription start site region 71489
Cpgi18697 7 28375602 to 28375917 315 CpG island CpG island 18697
Tssr65460 7 28375770 to 28375792 22 + TSS region transcription start site region 65460
Tssr65461 7 28376525 to 28376563 38 + TSS region transcription start site region 65461
Tssr65462 7 28376726 to 28376738 12 + TSS region transcription start site region 65462
Zfp36 7 28376784 to 28379228 2444 - protein coding gene zinc finger protein 36
Tssr71490 7 28376970 to 28376994 24 - TSS region transcription start site region 71490
Tssr71491 7 28377074 to 28377091 17 - TSS region transcription start site region 71491
Tssr71492 7 28377130 to 28377169 39 - TSS region transcription start site region 71492
Tssr71493 7 28377174 to 28377219 45 - TSS region transcription start site region 71493
Tssr71494 7 28377221 to 28377254 33 - TSS region transcription start site region 71494
Tssr71495 7 28377266 to 28377284 18 - TSS region transcription start site region 71495
Tssr65463 7 28377486 to 28377495 9 + TSS region transcription start site region 65463
Tssr71496 7 28377617 to 28377631 14 - TSS region transcription start site region 71496
Tssr71497 7 28377865 to 28377879 14 - TSS region transcription start site region 71497
Cpgi18698 7 28377899 to 28378599 700 CpG island CpG island 18698
Tssr71498 7 28377923 to 28377940 17 - TSS region transcription start site region 71498
Tssr65464 7 28377996 to 28378053 57 + TSS region transcription start site region 65464
Tssr71499 7 28378016 to 28378034 18 - TSS region transcription start site region 71499
Tssr71500 7 28378049 to 28378058 9 - TSS region transcription start site region 71500
Tssr71501 7 28378067 to 28378085 18 - TSS region transcription start site region 71501
Tssr71502 7 28378107 to 28378110 3 - TSS region transcription start site region 71502
Tssr71503 7 28378143 to 28378151 8 - TSS region transcription start site region 71503
Tssr71504 7 28378171 to 28378182 11 - TSS region transcription start site region 71504
Tssr71505 7 28378187 to 28378199 12 - TSS region transcription start site region 71505
Tssr71506 7 28378206 to 28378213 7 - TSS region transcription start site region 71506
Tssr71507 7 28378247 to 28378260 13 - TSS region transcription start site region 71507
Tssr71508 7 28378269 to 28378294 25 - TSS region transcription start site region 71508
Tssr71509 7 28378307 to 28378354 47 - TSS region transcription start site region 71509
Tssr71510 7 28378386 to 28378398 12 - TSS region transcription start site region 71510
Tssr71511 7 28378425 to 28378434 9 - TSS region transcription start site region 71511
Tssr71512 7 28378480 to 28378514 34 - TSS region transcription start site region 71512
Cpgi18699 7 28378747 to 28379497 750 CpG island CpG island 18699
Gm44710 7 28378980 to 28392514 13534 + antisense lncRNA gene predicted gene 44710
Tssr71513 7 28379096 to 28379101 5 - TSS region transcription start site region 71513
Tssr71514 7 28379225 to 28379235 10 - TSS region transcription start site region 71514
Tssr71515 7 28379247 to 28379263 16 - TSS region transcription start site region 71515
Tssr65465 7 28379352 to 28379390 38 + TSS region transcription start site region 65465
Tssr2163 7 28379356 to 28379400 44 - TSS region transcription start site region 2163
Tssr2164 7 28379489 to 28379502 13 - TSS region transcription start site region 2164
Tssr2165 7 28379532 to 28379545 13 - TSS region transcription start site region 2165
Tssr71516 7 28380281 to 28380285 4 - TSS region transcription start site region 71516
Tssr71517 7 28380927 to 28380936 9 - TSS region transcription start site region 71517
Tssr71518 7 28380949 to 28380954 5 - TSS region transcription start site region 71518
Tssr71519 7 28380970 to 28380981 11 - TSS region transcription start site region 71519
Cpgi18700 7 28380997 to 28381290 293 CpG island CpG island 18700
Tssr71520 7 28381014 to 28381021 7 - TSS region transcription start site region 71520
Tssr71521 7 28381026 to 28381042 16 - TSS region transcription start site region 71521
Tssr71522 7 28381068 to 28381087 19 - TSS region transcription start site region 71522
Tssr65466 7 28381259 to 28381281 22 + TSS region transcription start site region 65466
Tssr65467 7 28381283 to 28381295 12 + TSS region transcription start site region 65467
Tssr71523 7 28381292 to 28381297 5 - TSS region transcription start site region 71523
Tssr65468 7 28381392 to 28381403 11 + TSS region transcription start site region 65468
Tssr71524 7 28381878 to 28381899 21 - TSS region transcription start site region 71524
Tssr71525 7 28381924 to 28381929 5 - TSS region transcription start site region 71525
Tssr71526 7 28381932 to 28381943 11 - TSS region transcription start site region 71526
Cpgi18701 7 28381986 to 28382607 621 CpG island CpG island 18701
Tssr71527 7 28382112 to 28382145 33 - TSS region transcription start site region 71527
Tssr2166 7 28382895 to 28382906 11 - TSS region transcription start site region 2166
Tssr71528 7 28382976 to 28382991 15 - TSS region transcription start site region 71528
Tssr65469 7 28383100 to 28383129 29 + TSS region transcription start site region 65469
Tssr71529 7 28383124 to 28383150 26 - TSS region transcription start site region 71529
Tssr65470 7 28383419 to 28383437 18 + TSS region transcription start site region 65470
Tssr71530 7 28385759 to 28385764 5 - TSS region transcription start site region 71530
Tssr71531 7 28386116 to 28386138 22 - TSS region transcription start site region 71531
Med29 7 28386146 to 28392708 6562 - protein coding gene mediator complex subunit 29
Cpgi18702 7 28392201 to 28393759 1558 CpG island CpG island 18702
Tssr71532 7 28392688 to 28392708 20 - TSS region transcription start site region 71532
Tssr65471 7 28392916 to 28393013 97 + TSS region transcription start site region 65471
Paf1 7 28392996 to 28399383 6387 + protein coding gene Paf1, RNA polymerase II complex component
Tssr65472 7 28393037 to 28393042 5 + TSS region transcription start site region 65472
Samd4b 7 28399522 to 28436191 36669 - protein coding gene sterile alpha motif domain containing 4B