Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27886846-28406857

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312 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr65338 7 27887332 to 27887350 18 + TSS region transcription start site region 65338
Tssr65339 7 27899026 to 27899033 7 + TSS region transcription start site region 65339
Zfp974 7 27907392 to 27929430 22038 - protein coding gene zinc finger protein 974
Tssr71432 7 27912626 to 27912628 2 - TSS region transcription start site region 71432
Gm38720 7 27925378 to 27927382 2004 + lncRNA gene predicted gene, 38720
Gm26891 7 27927549 to 27928474 925 + antisense lncRNA gene predicted gene, 26891
Tssr65340 7 27927592 to 27927597 5 + TSS region transcription start site region 65340
Cpgi18679 7 27929087 to 27929488 401 CpG island CpG island 18679
Tssr71433 7 27929443 to 27929465 22 - TSS region transcription start site region 71433
Tssr71434 7 27929468 to 27929487 19 - TSS region transcription start site region 71434
Gm10651 7 27949155 to 27949763 608 - pseudogene predicted pseudogene 10651
Zfp780b 7 27959800 to 27979157 19357 - protein coding gene zinc finger protein 780B
Tssr71435 7 27970776 to 27970780 4 - TSS region transcription start site region 71435
Cpgi18680 7 27978962 to 27979294 332 CpG island CpG island 18680
Tssr71436 7 27979134 to 27979154 20 - TSS region transcription start site region 71436
Tssr71437 7 27979155 to 27979181 26 - TSS region transcription start site region 71437
Vmn1r-ps87 7 27982861 to 27983813 952 + pseudogene vomeronasal 1 receptor, pseudogene 87
Zfp850 7 27984854 to 28014115 29261 - protein coding gene zinc finger protein 850
Cpgi18681 7 28013689 to 28014355 666 CpG island CpG island 18681
Tssr71438 7 28014123 to 28014183 60 - TSS region transcription start site region 71438
Gm46025 7 28022462 to 28026145 3683 - pseudogene predicted gene, 46025
Psmc4 7 28041702 to 28050092 8390 - protein coding gene proteasome (prosome, macropain) 26S subunit, ATPase, 4
Cpgi18682 7 28049794 to 28050396 602 CpG island CpG island 18682
Tssr71439 7 28050028 to 28050080 52 - TSS region transcription start site region 71439
Gm44744 7 28054732 to 28055837 1105 + lincRNA gene predicted gene 44744
Tssr71440 7 28055163 to 28055168 5 - TSS region transcription start site region 71440
Tssr71441 7 28055200 to 28055209 9 - TSS region transcription start site region 71441
Tssr65341 7 28070945 to 28070949 4 + TSS region transcription start site region 65341
Tssr65342 7 28070998 to 28071029 31 + TSS region transcription start site region 65342
Tssr65343 7 28071198 to 28071213 15 + TSS region transcription start site region 65343
Tssr65344 7 28071215 to 28071228 13 + TSS region transcription start site region 65344
Tssr65345 7 28071230 to 28071242 12 + TSS region transcription start site region 65345
Fcgbp 7 28071236 to 28120862 49626 + protein coding gene Fc fragment of IgG binding protein
Tssr65346 7 28075177 to 28075188 11 + TSS region transcription start site region 65346
Tssr65347 7 28075204 to 28075215 11 + TSS region transcription start site region 65347
Tssr65348 7 28075224 to 28075242 18 + TSS region transcription start site region 65348
Tssr65349 7 28075295 to 28075302 7 + TSS region transcription start site region 65349
Tssr65350 7 28075311 to 28075328 17 + TSS region transcription start site region 65350
Tssr65351 7 28075333 to 28075350 17 + TSS region transcription start site region 65351
Tssr65352 7 28084917 to 28084950 33 + TSS region transcription start site region 65352
Tssr65353 7 28085191 to 28085212 21 + TSS region transcription start site region 65353
Tssr2154 7 28085345 to 28085358 13 - TSS region transcription start site region 2154
Tssr2155 7 28085354 to 28085365 11 + TSS region transcription start site region 2155
Tssr65354 7 28085413 to 28085424 11 + TSS region transcription start site region 65354
Tssr65355 7 28086333 to 28086342 9 + TSS region transcription start site region 65355
Tssr65356 7 28086346 to 28086361 15 + TSS region transcription start site region 65356
Tssr65357 7 28086470 to 28086480 10 + TSS region transcription start site region 65357
Tssr65358 7 28086525 to 28086543 18 + TSS region transcription start site region 65358
Tssr65359 7 28089812 to 28089827 15 + TSS region transcription start site region 65359
Tssr65360 7 28091796 to 28091817 21 + TSS region transcription start site region 65360
Gm21925 7 28093312 to 28147515 54203 + pseudogene predicted gene, 21925
Tssr65361 7 28093580 to 28093606 26 + TSS region transcription start site region 65361
Tssr65362 7 28101254 to 28101263 9 + TSS region transcription start site region 65362
Tssr65363 7 28101295 to 28101307 12 + TSS region transcription start site region 65363
Tssr65364 7 28103935 to 28103946 11 + TSS region transcription start site region 65364
Cpgi18683 7 28104607 to 28105126 519 CpG island CpG island 18683
Tssr65365 7 28104773 to 28104780 7 + TSS region transcription start site region 65365
Tssr2156 7 28107319 to 28107328 9 + TSS region transcription start site region 2156
Tssr71442 7 28115281 to 28115293 12 - TSS region transcription start site region 71442
Tssr71443 7 28115330 to 28115345 15 - TSS region transcription start site region 71443
Tssr71444 7 28115348 to 28115362 14 - TSS region transcription start site region 71444
Tssr65366 7 28115582 to 28115589 7 + TSS region transcription start site region 65366
Tssr65367 7 28115597 to 28115606 9 + TSS region transcription start site region 65367
Tssr65368 7 28115622 to 28115627 5 + TSS region transcription start site region 65368
Tssr65369 7 28117383 to 28117392 9 + TSS region transcription start site region 65369
Tssr65370 7 28117432 to 28117439 7 + TSS region transcription start site region 65370
Tssr65371 7 28120507 to 28120549 42 + TSS region transcription start site region 65371
Gm24356 7 28123254 to 28123359 105 + snRNA gene predicted gene, 24356
Tssr65372 7 28129102 to 28129106 4 + TSS region transcription start site region 65372
Tssr65373 7 28129142 to 28129182 40 + TSS region transcription start site region 65373
Tssr71445 7 28129320 to 28129328 8 - TSS region transcription start site region 71445
Tssr65374 7 28129378 to 28129388 10 + TSS region transcription start site region 65374
Tssr65375 7 28129431 to 28129458 27 + TSS region transcription start site region 65375
Tssr65376 7 28129459 to 28129479 20 + TSS region transcription start site region 65376
9530053A07Rik 7 28129466 to 28164811 35345 + protein coding gene RIKEN cDNA 9530053A07 gene
Tssr65377 7 28129480 to 28129490 10 + TSS region transcription start site region 65377
Tssr65378 7 28129512 to 28129513 1 + TSS region transcription start site region 65378
Tssr65379 7 28129636 to 28129638 2 + TSS region transcription start site region 65379
Tssr65380 7 28129804 to 28129810 6 + TSS region transcription start site region 65380
Tssr65381 7 28131488 to 28131503 15 + TSS region transcription start site region 65381
Tssr65382 7 28131541 to 28131556 15 + TSS region transcription start site region 65382
Tssr2157 7 28131592 to 28131599 7 - TSS region transcription start site region 2157
Tssr65383 7 28131655 to 28131662 7 + TSS region transcription start site region 65383
Tssr71446 7 28131664 to 28131669 5 - TSS region transcription start site region 71446
Tssr2158 7 28131693 to 28131700 7 - TSS region transcription start site region 2158
Tssr65384 7 28131696 to 28131707 11 + TSS region transcription start site region 65384
Tssr71447 7 28131751 to 28131768 17 - TSS region transcription start site region 71447
Tssr65385 7 28135055 to 28135058 3 + TSS region transcription start site region 65385
Tssr71448 7 28137098 to 28137107 9 - TSS region transcription start site region 71448
Tssr65386 7 28137104 to 28137111 7 + TSS region transcription start site region 65386
Tssr71449 7 28137108 to 28137120 12 - TSS region transcription start site region 71449
Tssr71450 7 28137125 to 28137132 7 - TSS region transcription start site region 71450
Tssr65387 7 28137433 to 28137444 11 + TSS region transcription start site region 65387
Tssr71451 7 28137518 to 28137539 21 - TSS region transcription start site region 71451
Tssr65388 7 28137530 to 28137542 12 + TSS region transcription start site region 65388
Tssr65389 7 28137586 to 28137596 10 + TSS region transcription start site region 65389
Tssr65390 7 28139722 to 28139746 24 + TSS region transcription start site region 65390
Tssr65391 7 28139753 to 28139758 5 + TSS region transcription start site region 65391
Tssr71452 7 28139766 to 28139783 17 - TSS region transcription start site region 71452
Tssr65392 7 28139775 to 28139795 20 + TSS region transcription start site region 65392
Tssr71453 7 28139789 to 28139803 14 - TSS region transcription start site region 71453
Tssr71454 7 28139816 to 28139836 20 - TSS region transcription start site region 71454
Tssr65393 7 28139913 to 28139921 8 + TSS region transcription start site region 65393
Tssr65394 7 28139962 to 28139971 9 + TSS region transcription start site region 65394
Tssr65395 7 28140077 to 28140083 6 + TSS region transcription start site region 65395
Tssr71455 7 28140127 to 28140136 9 - TSS region transcription start site region 71455
Tssr2159 7 28140142 to 28140150 8 + TSS region transcription start site region 2159
Tssr65396 7 28140164 to 28140165 1 + TSS region transcription start site region 65396
Tssr65397 7 28140169 to 28140179 10 + TSS region transcription start site region 65397
Tssr71456 7 28140181 to 28140192 11 - TSS region transcription start site region 71456
Tssr65398 7 28140183 to 28140189 6 + TSS region transcription start site region 65398
Tssr65399 7 28140195 to 28140216 21 + TSS region transcription start site region 65399
Tssr65400 7 28141000 to 28141015 15 + TSS region transcription start site region 65400
Tssr2160 7 28142220 to 28142234 14 + TSS region transcription start site region 2160
Tssr71457 7 28142247 to 28142258 11 - TSS region transcription start site region 71457
Tssr65401 7 28142262 to 28142270 8 + TSS region transcription start site region 65401
Tssr65402 7 28142285 to 28142302 17 + TSS region transcription start site region 65402
Tssr65403 7 28142413 to 28142422 9 + TSS region transcription start site region 65403
Tssr65404 7 28142446 to 28142456 10 + TSS region transcription start site region 65404
Tssr65405 7 28142483 to 28142510 27 + TSS region transcription start site region 65405
Tssr65406 7 28142562 to 28142573 11 + TSS region transcription start site region 65406
Tssr65407 7 28142589 to 28142596 7 + TSS region transcription start site region 65407
Tssr65408 7 28143857 to 28143864 7 + TSS region transcription start site region 65408
Tssr65409 7 28144198 to 28144209 11 + TSS region transcription start site region 65409
Gm38976 7 28146095 to 28148502 2407 - lncRNA gene predicted gene, 38976
Tssr71458 7 28146811 to 28146833 22 - TSS region transcription start site region 71458
Tssr71459 7 28146846 to 28146857 11 - TSS region transcription start site region 71459
Tssr65410 7 28147025 to 28147032 7 + TSS region transcription start site region 65410
Tssr65411 7 28147165 to 28147174 9 + TSS region transcription start site region 65411
Tssr65412 7 28147422 to 28147430 8 + TSS region transcription start site region 65412
Tssr65413 7 28152815 to 28152825 10 + TSS region transcription start site region 65413
Tssr71460 7 28152817 to 28152824 7 - TSS region transcription start site region 71460
Tssr65414 7 28152916 to 28152930 14 + TSS region transcription start site region 65414
Tssr65415 7 28153415 to 28153426 11 + TSS region transcription start site region 65415
Tssr65416 7 28154576 to 28154579 3 + TSS region transcription start site region 65416
Tssr65417 7 28154628 to 28154638 10 + TSS region transcription start site region 65417
Tssr65418 7 28154640 to 28154651 11 + TSS region transcription start site region 65418
Tssr65419 7 28154693 to 28154714 21 + TSS region transcription start site region 65419
Tssr65420 7 28154720 to 28154730 10 + TSS region transcription start site region 65420
Tssr65421 7 28155211 to 28155220 9 + TSS region transcription start site region 65421
Tssr65422 7 28155234 to 28155244 10 + TSS region transcription start site region 65422
Tssr65423 7 28156712 to 28156729 17 + TSS region transcription start site region 65423
Tssr65424 7 28156730 to 28156734 4 + TSS region transcription start site region 65424
Tssr2161 7 28157018 to 28157026 8 + TSS region transcription start site region 2161
Tssr65425 7 28157069 to 28157074 5 + TSS region transcription start site region 65425
Tssr65426 7 28157525 to 28157535 10 + TSS region transcription start site region 65426
Tssr65427 7 28157548 to 28157564 16 + TSS region transcription start site region 65427
Tssr65428 7 28157571 to 28157581 10 + TSS region transcription start site region 65428
Tssr65429 7 28157584 to 28157594 10 + TSS region transcription start site region 65429
Tssr65430 7 28157629 to 28157640 11 + TSS region transcription start site region 65430
Tssr65431 7 28157646 to 28157654 8 + TSS region transcription start site region 65431
Tssr65432 7 28157664 to 28157677 13 + TSS region transcription start site region 65432
Tssr65433 7 28157781 to 28157789 8 + TSS region transcription start site region 65433
Tssr65434 7 28157841 to 28157849 8 + TSS region transcription start site region 65434
Tssr65435 7 28157988 to 28157996 8 + TSS region transcription start site region 65435
Tssr65436 7 28159426 to 28159431 5 + TSS region transcription start site region 65436
Tssr65437 7 28159480 to 28159494 14 + TSS region transcription start site region 65437
Tssr65438 7 28161162 to 28161167 5 + TSS region transcription start site region 65438
Tssr65439 7 28162723 to 28162724 1 + TSS region transcription start site region 65439
Tssr65440 7 28162779 to 28162790 11 + TSS region transcription start site region 65440
Tssr65441 7 28162864 to 28162875 11 + TSS region transcription start site region 65441
Tssr65442 7 28164747 to 28164778 31 + TSS region transcription start site region 65442
Gm31024 7 28167275 to 28169627 2352 - lncRNA gene predicted gene, 31024
Tssr65443 7 28168862 to 28168908 46 + TSS region transcription start site region 65443
Cpgi18684 7 28169569 to 28170464 895 CpG island CpG island 18684
Tssr65444 7 28169690 to 28169743 53 + TSS region transcription start site region 65444
Tssr65445 7 28169744 to 28169755 11 + TSS region transcription start site region 65445
Fbl 7 28169748 to 28179269 9521 + protein coding gene fibrillarin
Tssr65446 7 28169770 to 28169781 11 + TSS region transcription start site region 65446
Cpgi18685 7 28179109 to 28180481 1372 CpG island CpG island 18685
Dyrk1b 7 28179469 to 28187294 7825 + protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
Tssr65447 7 28179487 to 28179535 48 + TSS region transcription start site region 65447
Tssr65448 7 28179993 to 28180028 35 + TSS region transcription start site region 65448
Tssr65449 7 28180050 to 28180055 5 + TSS region transcription start site region 65449
Tssr65450 7 28180174 to 28180219 45 + TSS region transcription start site region 65450
Tssr65451 7 28180226 to 28180266 40 + TSS region transcription start site region 65451
Tssr65452 7 28180272 to 28180289 17 + TSS region transcription start site region 65452
Tssr65453 7 28187580 to 28187584 4 + TSS region transcription start site region 65453
Cpgi18686 7 28208925 to 28209131 206 CpG island CpG island 18686
Gm45011 7 28226358 to 28228654 2296 + unclassified gene predicted gene 45011
Gm18672 7 28235651 to 28235920 269 - pseudogene predicted gene, 18672
Gm38591 7 28243022 to 28243753 731 - protein coding gene predicted gene, 38591
Cpgi18687 7 28267656 to 28268824 1168 CpG island CpG island 18687
Tssr65454 7 28267797 to 28267808 11 + TSS region transcription start site region 65454
Tssr65455 7 28267809 to 28267932 123 + TSS region transcription start site region 65455
Eid2 7 28267881 to 28269168 1287 + protein coding gene EP300 interacting inhibitor of differentiation 2
Cpgi18688 7 28277578 to 28278563 985 CpG island CpG island 18688
Tssr65456 7 28277717 to 28277770 53 + TSS region transcription start site region 65456
Eid2b 7 28277739 to 28279489 1750 + protein coding gene EP300 interacting inhibitor of differentiation 2B
Selenov 7 28284652 to 28291134 6482 - protein coding gene selenoprotein V
Cpgi18689 7 28290252 to 28291443 1191 CpG island CpG island 18689
Tssr71461 7 28290695 to 28290721 26 - TSS region transcription start site region 71461
Tssr71462 7 28291105 to 28291112 7 - TSS region transcription start site region 71462
Tssr71463 7 28291117 to 28291128 11 - TSS region transcription start site region 71463
Tssr71464 7 28291130 to 28291164 34 - TSS region transcription start site region 71464
Dll3 7 28293555 to 28301785 8230 - protein coding gene delta like canonical Notch ligand 3
Cpgi18690 7 28294000 to 28295203 1203 CpG island CpG island 18690
Tssr71465 7 28294574 to 28294602 28 - TSS region transcription start site region 71465
Tssr71466 7 28294609 to 28294670 61 - TSS region transcription start site region 71466
Cpgi18691 7 28298530 to 28299250 720 CpG island CpG island 18691