Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27636612-27826621

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akt2 7 27591557 to 27639453 47896 + protein coding gene thymoma viral proto-oncogene 2
Gm38973 7 27649426 to 27651059 1633 - lncRNA gene predicted gene, 38973
Tssr65321 7 27649897 to 27649902 5 + TSS region transcription start site region 65321
Cpgi18670 7 27653582 to 27654425 843 CpG island CpG island 18670
Tssr65322 7 27653881 to 27653900 19 + TSS region transcription start site region 65322
Tssr65323 7 27653906 to 27653960 54 + TSS region transcription start site region 65323
Ttc9b 7 27653924 to 27656207 2283 + protein coding gene tetratricopeptide repeat domain 9B
Tssr65324 7 27653994 to 27654007 13 + TSS region transcription start site region 65324
Map3k10 7 27656375 to 27674598 18223 - protein coding gene mitogen-activated protein kinase kinase kinase 10
Cpgi18671 7 27657766 to 27658741 975 CpG island CpG island 18671
1500037F05Rik 7 27670932 to 27671782 850 unclassified gene RIKEN cDNA 1500037F05 gene
Cpgi18672 7 27673359 to 27675113 1754 CpG island CpG island 18672
Tssr71429 7 27674516 to 27674630 114 - TSS region transcription start site region 71429
Gm44684 7 27674659 to 27677844 3185 - unclassified non-coding RNA gene predicted gene 44684
Gm45976 7 27678831 to 27690211 11380 - lncRNA gene predicted gene, 45976
Zfp607b 7 27689340 to 27706484 17144 + protein coding gene zinc finger protein 607B
Tssr65325 7 27689529 to 27689572 43 + TSS region transcription start site region 65325
Phf5b-ps 7 27709721 to 27710513 792 + pseudogene PHD finger protein 5B, pseudogene
Cpgi18673 7 27731174 to 27731963 789 CpG island CpG island 18673
Tssr65326 7 27731373 to 27731397 24 + TSS region transcription start site region 65326
Tssr65327 7 27731398 to 27731441 43 + TSS region transcription start site region 65327
Zfp60 7 27731409 to 27751689 20280 + protein coding gene zinc finger protein 60
Tssr65328 7 27731445 to 27731456 11 + TSS region transcription start site region 65328
Tssr65329 7 27731612 to 27731621 9 + TSS region transcription start site region 65329
Tssr65330 7 27749545 to 27749550 5 + TSS region transcription start site region 65330
Tssr71430 7 27761332 to 27761353 21 - TSS region transcription start site region 71430
Tssr65331 7 27765659 to 27765732 73 + TSS region transcription start site region 65331
Gm10046 7 27765673 to 27770972 5299 + pseudogene predicted gene 10046
Cpgi18674 7 27766277 to 27766471 194 CpG island CpG island 18674
Gm29810 7 27784377 to 27795483 11106 + pseudogene predicted gene, 29810
Cpgi18675 7 27804727 to 27805055 328 CpG island CpG island 18675
Tssr65332 7 27804819 to 27804872 53 + TSS region transcription start site region 65332
Tssr65333 7 27804882 to 27804894 12 + TSS region transcription start site region 65333
Zfp626 7 27807196 to 27822916 15720 + protein coding gene zinc finger protein 626