Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27503267-27551175

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prx	7	27499305 to 27520041	20736	+	protein coding gene	periaxin
Gm15541	7	27502719 to 27507831	5112	-	antisense lncRNA gene	predicted gene 15541
Cpgi18665	7	27507746 to 27508329	583		CpG island	CpG island 18665
Tssr65285	7	27507840 to 27507860	20	+	TSS region	transcription start site region 65285
Tssr71406	7	27508091 to 27508110	19	-	TSS region	transcription start site region 71406
Cpgi18666	7	27515318 to 27515542	224		CpG island	CpG island 18666
Tssr65286	7	27523233 to 27523242	9	+	TSS region	transcription start site region 65286
Tssr65287	7	27523252 to 27523269	17	+	TSS region	transcription start site region 65287
Hipk4	7	27523267 to 27531175	7908	+	protein coding gene	homeodomain interacting protein kinase 4
Tssr65288	7	27523276 to 27523285	9	+	TSS region	transcription start site region 65288
Tssr71407	7	27531712 to 27531737	25	-	TSS region	transcription start site region 71407
Pld3	7	27532000 to 27553218	21218	-	protein coding gene	phospholipase D family, member 3
Tssr71408	7	27532463 to 27532479	16	-	TSS region	transcription start site region 71408
Tssr71409	7	27532624 to 27532654	30	-	TSS region	transcription start site region 71409
Tssr65289	7	27533645 to 27533672	27	+	TSS region	transcription start site region 65289
Tssr71410	7	27533697 to 27533709	12	-	TSS region	transcription start site region 71410
Tssr71411	7	27533721 to 27533734	13	-	TSS region	transcription start site region 71411
Tssr71412	7	27535309 to 27535336	27	-	TSS region	transcription start site region 71412
Tssr65290	7	27535804 to 27535825	21	+	TSS region	transcription start site region 65290
Tssr71413	7	27535878 to 27535909	31	-	TSS region	transcription start site region 71413
Tssr71414	7	27535913 to 27535934	21	-	TSS region	transcription start site region 71414
Tssr65291	7	27537573 to 27537596	23	+	TSS region	transcription start site region 65291
Tssr65292	7	27537602 to 27537645	43	+	TSS region	transcription start site region 65292
Tssr71415	7	27537750 to 27537779	29	-	TSS region	transcription start site region 71415
Tssr65293	7	27541084 to 27541112	28	+	TSS region	transcription start site region 65293
Tssr71416	7	27541200 to 27541243	43	-	TSS region	transcription start site region 71416
Tssr65294	7	27541654 to 27541704	50	+	TSS region	transcription start site region 65294
Tssr71417	7	27541705 to 27541728	23	-	TSS region	transcription start site region 71417
Tssr71418	7	27541733 to 27541751	18	-	TSS region	transcription start site region 71418
Tssr71419	7	27541778 to 27541798	20	-	TSS region	transcription start site region 71419
Tssr71420	7	27541800 to 27541835	35	-	TSS region	transcription start site region 71420
Tssr71421	7	27541953 to 27541993	40	-	TSS region	transcription start site region 71421
Tssr71422	7	27542329 to 27542352	23	-	TSS region	transcription start site region 71422
Cpgi18667	7	27542614 to 27542955	341		CpG island	CpG island 18667
Tssr71423	7	27542774 to 27542809	35	-	TSS region	transcription start site region 71423
Tssr71424	7	27545124 to 27545160	36	-	TSS region	transcription start site region 71424
Tssr65295	7	27545305 to 27545329	24	+	TSS region	transcription start site region 65295