Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27311328-27411340

45 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ltbp4	7	27305136 to 27337692	32556	-	protein coding gene	latent transforming growth factor beta binding protein 4
Tssr65265	7	27311437 to 27311450	13	+	TSS region	transcription start site region 65265
Cpgi18637	7	27319408 to 27319727	319		CpG island	CpG island 18637
Cpgi18638	7	27322037 to 27322452	415		CpG island	CpG island 18638
Cpgi18639	7	27324985 to 27325272	287		CpG island	CpG island 18639
Cpgi18640	7	27325502 to 27325989	487		CpG island	CpG island 18640
Cpgi18641	7	27326430 to 27326871	441		CpG island	CpG island 18641
Tssr71384	7	27327477 to 27327494	17	-	TSS region	transcription start site region 71384
Tssr71385	7	27328305 to 27328341	36	-	TSS region	transcription start site region 71385
Cpgi18642	7	27328703 to 27328908	205		CpG island	CpG island 18642
Cpgi18643	7	27329291 to 27329959	668		CpG island	CpG island 18643
Tssr71386	7	27329473 to 27329489	16	-	TSS region	transcription start site region 71386
Gm30543	7	27329804 to 27336812	7008	+	lncRNA gene	predicted gene, 30543
Tssr71387	7	27329881 to 27329885	4	-	TSS region	transcription start site region 71387
Cpgi18644	7	27330915 to 27331275	360		CpG island	CpG island 18644
Cpgi18645	7	27332393 to 27334916	2523		CpG island	CpG island 18645
Tssr71388	7	27333602 to 27333640	38	-	TSS region	transcription start site region 71388
Cpgi18646	7	27335983 to 27336774	791		CpG island	CpG island 18646
Cpgi18647	7	27337375 to 27337842	467		CpG island	CpG island 18647
Tssr71389	7	27337582 to 27337616	34	-	TSS region	transcription start site region 71389
Tssr71390	7	27337667 to 27337680	13	-	TSS region	transcription start site region 71390
Tssr71391	7	27339692 to 27339709	17	-	TSS region	transcription start site region 71391
Shkbp1	7	27342133 to 27356019	13886	-	protein coding gene	Sh3kbp1 binding protein 1
Gm20479	7	27352649 to 27357419	4770	-	protein coding gene	predicted gene 20479
Tssr71392	7	27355699 to 27355729	30	-	TSS region	transcription start site region 71392
Cpgi18648	7	27355812 to 27356478	666		CpG island	CpG island 18648
Tssr71393	7	27355944 to 27355977	33	-	TSS region	transcription start site region 71393
Tssr71394	7	27355980 to 27356014	34	-	TSS region	transcription start site region 71394
Sptbn4	7	27356383 to 27447686	91303	-	protein coding gene	spectrin beta, non-erythrocytic 4
Cpgi18649	7	27357145 to 27357540	395		CpG island	CpG island 18649
Tssr71395	7	27360112 to 27360136	24	-	TSS region	transcription start site region 71395
Tssr71396	7	27361328 to 27361340	12	-	TSS region	transcription start site region 71396
Tssr71397	7	27361343 to 27361360	17	-	TSS region	transcription start site region 71397
Cpgi18650	7	27361371 to 27362017	646		CpG island	CpG island 18650
Cpgi18651	7	27363755 to 27364749	994		CpG island	CpG island 18651
Tssr71398	7	27366534 to 27366564	30	-	TSS region	transcription start site region 71398
Cpgi18652	7	27367475 to 27368023	548		CpG island	CpG island 18652
Cpgi18653	7	27371879 to 27372530	651		CpG island	CpG island 18653
Cpgi18654	7	27375237 to 27375687	450		CpG island	CpG island 18654
Cpgi18655	7	27396090 to 27397089	999		CpG island	CpG island 18655
Tssr71399	7	27396542 to 27396566	24	-	TSS region	transcription start site region 71399
Tssr71400	7	27396570 to 27396615	45	-	TSS region	transcription start site region 71400
Cpgi18656	7	27402707 to 27403003	296		CpG island	CpG island 18656
Cpgi18657	7	27404077 to 27405090	1013		CpG island	CpG island 18657
Cpgi18658	7	27407881 to 27409430	1549		CpG island	CpG island 18658