Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27208433-27332144

53 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Itpkc	7	27207170 to 27228597	21427	-	protein coding gene	inositol 1,4,5-trisphosphate 3-kinase C
Cpgi18629	7	27227976 to 27228943	967		CpG island	CpG island 18629
Tssr71373	7	27228286 to 27228304	18	-	TSS region	transcription start site region 71373
Tssr71374	7	27228502 to 27228517	15	-	TSS region	transcription start site region 71374
Tssr71375	7	27228605 to 27228636	31	-	TSS region	transcription start site region 71375
Cpgi18630	7	27232819 to 27233282	463		CpG island	CpG island 18630
Tssr71376	7	27232872 to 27232888	16	-	TSS region	transcription start site region 71376
Tssr65255	7	27233003 to 27233064	61	+	TSS region	transcription start site region 65255
Coq8b	7	27233023 to 27257950	24927	+	protein coding gene	coenzyme Q8B
Tssr65256	7	27243366 to 27243369	3	+	TSS region	transcription start site region 65256
Gm15567	7	27249263 to 27257932	8669	-	antisense lncRNA gene	predicted gene 15567
Tssr65257	7	27252175 to 27252208	33	+	TSS region	transcription start site region 65257
Gm44641	7	27252176 to 27262252	10076	+	unclassified non-coding RNA gene	predicted gene 44641
Tssr65258	7	27252256 to 27252266	10	+	TSS region	transcription start site region 65258
Tssr65259	7	27256479 to 27256504	25	+	TSS region	transcription start site region 65259
Cpgi18631	7	27257136 to 27257608	472		CpG island	CpG island 18631
Cpgi18632	7	27258330 to 27259373	1043		CpG island	CpG island 18632
Numbl	7	27258433 to 27282144	23711	+	protein coding gene	numb-like
Tssr65260	7	27258761 to 27258815	54	+	TSS region	transcription start site region 65260
Tssr65261	7	27258840 to 27258859	19	+	TSS region	transcription start site region 65261
Tssr65262	7	27266748 to 27266767	19	+	TSS region	transcription start site region 65262
Gm15570	7	27271764 to 27272383	619	-	pseudogene	predicted gene 15570
9530041E20Rik	7	27282183 to 27283130	947		unclassified gene	RIKEN cDNA 9530041E20 gene
Cpgi18633	7	27284995 to 27285471	476		CpG island	CpG island 18633
D7Mit294	7	27289442 to 27289559	117		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 294
Nhdlq6	7	27289442 to 27289559	117		QTL	non-HDL QTL 6
Ltbp4	7	27305136 to 27337692	32556	-	protein coding gene	latent transforming growth factor beta binding protein 4
Cpgi18634	7	27305403 to 27305569	166		CpG island	CpG island 18634
Cpgi18635	7	27308905 to 27309064	159		CpG island	CpG island 18635
Tssr65263	7	27308914 to 27308951	37	+	TSS region	transcription start site region 65263
Tssr65264	7	27309278 to 27309294	16	+	TSS region	transcription start site region 65264
Tssr71377	7	27310228 to 27310249	21	-	TSS region	transcription start site region 71377
Tssr71378	7	27310439 to 27310453	14	-	TSS region	transcription start site region 71378
Cpgi18636	7	27310449 to 27310718	269		CpG island	CpG island 18636
Tssr71379	7	27310613 to 27310640	27	-	TSS region	transcription start site region 71379
Tssr71380	7	27310643 to 27310693	50	-	TSS region	transcription start site region 71380
Tssr71381	7	27310695 to 27310706	11	-	TSS region	transcription start site region 71381
Tssr71382	7	27311193 to 27311204	11	-	TSS region	transcription start site region 71382
Tssr71383	7	27311221 to 27311235	14	-	TSS region	transcription start site region 71383
Tssr65265	7	27311437 to 27311450	13	+	TSS region	transcription start site region 65265
Cpgi18637	7	27319408 to 27319727	319		CpG island	CpG island 18637
Cpgi18638	7	27322037 to 27322452	415		CpG island	CpG island 18638
Cpgi18639	7	27324985 to 27325272	287		CpG island	CpG island 18639
Cpgi18640	7	27325502 to 27325989	487		CpG island	CpG island 18640
Cpgi18641	7	27326430 to 27326871	441		CpG island	CpG island 18641
Tssr71384	7	27327477 to 27327494	17	-	TSS region	transcription start site region 71384
Tssr71385	7	27328305 to 27328341	36	-	TSS region	transcription start site region 71385
Cpgi18642	7	27328703 to 27328908	205		CpG island	CpG island 18642
Cpgi18643	7	27329291 to 27329959	668		CpG island	CpG island 18643
Tssr71386	7	27329473 to 27329489	16	-	TSS region	transcription start site region 71386
Gm30543	7	27329804 to 27336812	7008	+	lncRNA gene	predicted gene, 30543
Tssr71387	7	27329881 to 27329885	4	-	TSS region	transcription start site region 71387
Cpgi18644	7	27330915 to 27331275	360		CpG island	CpG island 18644