Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:26953330-27564373

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285 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr65199 7 27029074 to 27029087 13 + TSS region transcription start site region 65199
Cyp2a12 7 27029090 to 27036818 7728 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 12
Tssr65200 7 27029644 to 27029655 11 + TSS region transcription start site region 65200
Tssr65201 7 27035549 to 27035579 30 + TSS region transcription start site region 65201
Gm4290 7 27046894 to 27047707 813 + pseudogene predicted gene 4290
Gm29754 7 27067456 to 27067813 357 + pseudogene predicted gene, 29754
Tssr65202 7 27119749 to 27119765 16 + TSS region transcription start site region 65202
Tssr65203 7 27119948 to 27119966 18 + TSS region transcription start site region 65203
Cyp2f2 7 27119955 to 27133660 13705 + protein coding gene cytochrome P450, family 2, subfamily f, polypeptide 2
Tssr65204 7 27120806 to 27120840 34 + TSS region transcription start site region 65204
Tssr65205 7 27121491 to 27121500 9 + TSS region transcription start site region 65205
Tssr65206 7 27121536 to 27121549 13 + TSS region transcription start site region 65206
Tssr65207 7 27121572 to 27121621 49 + TSS region transcription start site region 65207
Tssr65208 7 27121622 to 27121635 13 + TSS region transcription start site region 65208
Tssr65209 7 27121640 to 27121660 20 + TSS region transcription start site region 65209
Tssr65210 7 27121665 to 27121677 12 + TSS region transcription start site region 65210
Tssr65211 7 27121686 to 27121716 30 + TSS region transcription start site region 65211
Tssr65212 7 27121841 to 27121897 56 + TSS region transcription start site region 65212
Tssr71336 7 27121854 to 27121867 13 - TSS region transcription start site region 71336
Tssr65213 7 27121917 to 27121932 15 + TSS region transcription start site region 65213
Tssr71337 7 27121923 to 27121952 29 - TSS region transcription start site region 71337
Tssr65214 7 27121940 to 27121969 29 + TSS region transcription start site region 65214
Tssr65215 7 27122133 to 27122144 11 + TSS region transcription start site region 65215
Gm15883 7 27124481 to 27130674 6193 - antisense lncRNA gene predicted gene 15883
Tssr65216 7 27124613 to 27124627 14 + TSS region transcription start site region 65216
Tssr65217 7 27124640 to 27124679 39 + TSS region transcription start site region 65217
Tssr65218 7 27124846 to 27124857 11 + TSS region transcription start site region 65218
Tssr65219 7 27124897 to 27124906 9 + TSS region transcription start site region 65219
Tssr65220 7 27124932 to 27124971 39 + TSS region transcription start site region 65220
Tssr65221 7 27129182 to 27129296 114 + TSS region transcription start site region 65221
Tssr65222 7 27129707 to 27129720 13 + TSS region transcription start site region 65222
Tssr65223 7 27129755 to 27129762 7 + TSS region transcription start site region 65223
Tssr71338 7 27129757 to 27129788 31 - TSS region transcription start site region 71338
Tssr65224 7 27129787 to 27129799 12 + TSS region transcription start site region 65224
Tssr65225 7 27129808 to 27129815 7 + TSS region transcription start site region 65225
Tssr65226 7 27129829 to 27129863 34 + TSS region transcription start site region 65226
Tssr65227 7 27130284 to 27130353 69 + TSS region transcription start site region 65227
Tssr71339 7 27130329 to 27130380 51 - TSS region transcription start site region 71339
Tssr65228 7 27130370 to 27130404 34 + TSS region transcription start site region 65228
Tssr71340 7 27130418 to 27130437 19 - TSS region transcription start site region 71340
Cpgi18623 7 27131086 to 27131340 254 CpG island CpG island 18623
Tssr71341 7 27131188 to 27131215 27 - TSS region transcription start site region 71341
Tssr65229 7 27131200 to 27131211 11 + TSS region transcription start site region 65229
Tssr65230 7 27131220 to 27131252 32 + TSS region transcription start site region 65230
Tssr71342 7 27131234 to 27131256 22 - TSS region transcription start site region 71342
Tssr71343 7 27131260 to 27131287 27 - TSS region transcription start site region 71343
Tssr65231 7 27131268 to 27131314 46 + TSS region transcription start site region 65231
Tssr71344 7 27131291 to 27131322 31 - TSS region transcription start site region 71344
Tssr65232 7 27131320 to 27131331 11 + TSS region transcription start site region 65232
Tssr65233 7 27132454 to 27132516 62 + TSS region transcription start site region 65233
Tssr71345 7 27132506 to 27132534 28 - TSS region transcription start site region 71345
Tssr65234 7 27132523 to 27132554 31 + TSS region transcription start site region 65234
Tssr65235 7 27132558 to 27132570 12 + TSS region transcription start site region 65235
Tssr65236 7 27132576 to 27132596 20 + TSS region transcription start site region 65236
Tssr65237 7 27133210 to 27133223 13 + TSS region transcription start site region 65237
Tssr65238 7 27133244 to 27133268 24 + TSS region transcription start site region 65238
Tssr71346 7 27133268 to 27133288 20 - TSS region transcription start site region 71346
Tssr65239 7 27133316 to 27133336 20 + TSS region transcription start site region 65239
Tssr71347 7 27133319 to 27133341 22 - TSS region transcription start site region 71347
Tssr65240 7 27133345 to 27133378 33 + TSS region transcription start site region 65240
Tssr65241 7 27133430 to 27133457 27 + TSS region transcription start site region 65241
Tssr71348 7 27133467 to 27133495 28 - TSS region transcription start site region 71348
Tssr65242 7 27133475 to 27133486 11 + TSS region transcription start site region 65242
Tssr65243 7 27133490 to 27133516 26 + TSS region transcription start site region 65243
Tssr71349 7 27133512 to 27133538 26 - TSS region transcription start site region 71349
Tssr65244 7 27133518 to 27133528 10 + TSS region transcription start site region 65244
Tssr65245 7 27133574 to 27133587 13 + TSS region transcription start site region 65245
Tssr71350 7 27133656 to 27133665 9 - TSS region transcription start site region 71350
Gm44640 7 27148390 to 27148636 246 - pseudogene predicted gene 44640
Cyp2t4 7 27153714 to 27158564 4850 + protein coding gene cytochrome P450, family 2, subfamily t, polypeptide 4
Cpgi18624 7 27156028 to 27156180 152 CpG island CpG island 18624
Egln2 7 27158658 to 27166802 8144 - protein coding gene egl-9 family hypoxia-inducible factor 2
Cpgi18625 7 27164624 to 27164822 198 CpG island CpG island 18625
Cpgi18626 7 27165991 to 27167179 1188 CpG island CpG island 18626
Tssr71351 7 27166382 to 27166393 11 - TSS region transcription start site region 71351
Tssr71352 7 27166427 to 27166467 40 - TSS region transcription start site region 71352
Tssr71353 7 27166470 to 27166522 52 - TSS region transcription start site region 71353
Tssr2152 7 27166540 to 27166551 11 - TSS region transcription start site region 2152
Tssr71354 7 27166712 to 27166724 12 - TSS region transcription start site region 71354
Tssr71355 7 27166732 to 27166765 33 - TSS region transcription start site region 71355
Gm21983 7 27168430 to 27181086 12656 - protein coding gene predicted gene 21983
Rab4b 7 27168433 to 27178883 10450 - protein coding gene RAB4B, member RAS oncogene family
Tssr71356 7 27168685 to 27168720 35 - TSS region transcription start site region 71356
Tssr71357 7 27168728 to 27168746 18 - TSS region transcription start site region 71357
Tssr71358 7 27174552 to 27174576 24 - TSS region transcription start site region 71358
Tssr71359 7 27174581 to 27174603 22 - TSS region transcription start site region 71359
Mir3101 7 27176006 to 27176093 87 - miRNA gene microRNA 3101
Cpgi18627 7 27178552 to 27179269 717 CpG island CpG island 18627
Tssr71360 7 27178814 to 27178829 15 - TSS region transcription start site region 71360
Tssr71361 7 27178835 to 27178888 53 - TSS region transcription start site region 71361
Tssr71362 7 27178912 to 27178923 11 - TSS region transcription start site region 71362
Mia 7 27179741 to 27181149 1408 - protein coding gene melanoma inhibitory activity
Tssr65246 7 27179742 to 27179749 7 + TSS region transcription start site region 65246
Tssr71363 7 27181047 to 27181137 90 - TSS region transcription start site region 71363
Tssr71364 7 27181151 to 27181162 11 - TSS region transcription start site region 71364
Snrpa 7 27187006 to 27196271 9265 - protein coding gene small nuclear ribonucleoprotein polypeptide A
Tssr71365 7 27189469 to 27189489 20 - TSS region transcription start site region 71365
Tssr65247 7 27195121 to 27195123 2 + TSS region transcription start site region 65247
Tssr65248 7 27195138 to 27195143 5 + TSS region transcription start site region 65248
Tssr65249 7 27195148 to 27195159 11 + TSS region transcription start site region 65249
Tssr71366 7 27195646 to 27195674 28 - TSS region transcription start site region 71366
Cpgi18628 7 27195648 to 27196551 903 CpG island CpG island 18628
Tssr71367 7 27195687 to 27195694 7 - TSS region transcription start site region 71367
Tssr71368 7 27195700 to 27195711 11 - TSS region transcription start site region 71368
Tssr71369 7 27195717 to 27195725 8 - TSS region transcription start site region 71369
Tssr71370 7 27195727 to 27195768 41 - TSS region transcription start site region 71370
BC024978 7 27195781 to 27206123 10342 + protein coding gene cDNA sequence BC024978
Tssr65250 7 27195814 to 27195830 16 + TSS region transcription start site region 65250
Tssr65251 7 27195841 to 27195885 44 + TSS region transcription start site region 65251
Tssr65252 7 27195899 to 27195915 16 + TSS region transcription start site region 65252
Tssr71371 7 27196100 to 27196132 32 - TSS region transcription start site region 71371
Tssr71372 7 27196138 to 27196174 36 - TSS region transcription start site region 71372
Tssr65253 7 27196398 to 27196459 61 + TSS region transcription start site region 65253
Tssr65254 7 27196976 to 27196998 22 + TSS region transcription start site region 65254
Mir1191 7 27205536 to 27205655 119 + miRNA gene microRNA 1191
1110035D15Rik 7 27205729 to 27206121 392 unclassified gene RIKEN cDNA 1110035D15 gene
Itpkc 7 27207170 to 27228597 21427 - protein coding gene inositol 1,4,5-trisphosphate 3-kinase C
Cpgi18629 7 27227976 to 27228943 967 CpG island CpG island 18629
Tssr71373 7 27228286 to 27228304 18 - TSS region transcription start site region 71373
Tssr71374 7 27228502 to 27228517 15 - TSS region transcription start site region 71374
Tssr71375 7 27228605 to 27228636 31 - TSS region transcription start site region 71375
Cpgi18630 7 27232819 to 27233282 463 CpG island CpG island 18630
Tssr71376 7 27232872 to 27232888 16 - TSS region transcription start site region 71376
Tssr65255 7 27233003 to 27233064 61 + TSS region transcription start site region 65255
Coq8b 7 27233023 to 27257950 24927 + protein coding gene coenzyme Q8B
Tssr65256 7 27243366 to 27243369 3 + TSS region transcription start site region 65256
Gm15567 7 27249263 to 27257932 8669 - antisense lncRNA gene predicted gene 15567
Tssr65257 7 27252175 to 27252208 33 + TSS region transcription start site region 65257
Gm44641 7 27252176 to 27262252 10076 + unclassified non-coding RNA gene predicted gene 44641
Tssr65258 7 27252256 to 27252266 10 + TSS region transcription start site region 65258
Tssr65259 7 27256479 to 27256504 25 + TSS region transcription start site region 65259
Cpgi18631 7 27257136 to 27257608 472 CpG island CpG island 18631
Cpgi18632 7 27258330 to 27259373 1043 CpG island CpG island 18632
Numbl 7 27258433 to 27282144 23711 + protein coding gene numb-like
Tssr65260 7 27258761 to 27258815 54 + TSS region transcription start site region 65260
Tssr65261 7 27258840 to 27258859 19 + TSS region transcription start site region 65261
Tssr65262 7 27266748 to 27266767 19 + TSS region transcription start site region 65262
Gm15570 7 27271764 to 27272383 619 - pseudogene predicted gene 15570
9530041E20Rik 7 27282183 to 27283130 947 unclassified gene RIKEN cDNA 9530041E20 gene
Cpgi18633 7 27284995 to 27285471 476 CpG island CpG island 18633
D7Mit294 7 27289442 to 27289559 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 294
Nhdlq6 7 27289442 to 27289559 117 QTL non-HDL QTL 6
Ltbp4 7 27305136 to 27337692 32556 - protein coding gene latent transforming growth factor beta binding protein 4
Cpgi18634 7 27305403 to 27305569 166 CpG island CpG island 18634
Cpgi18635 7 27308905 to 27309064 159 CpG island CpG island 18635
Tssr65263 7 27308914 to 27308951 37 + TSS region transcription start site region 65263
Tssr65264 7 27309278 to 27309294 16 + TSS region transcription start site region 65264
Tssr71377 7 27310228 to 27310249 21 - TSS region transcription start site region 71377
Tssr71378 7 27310439 to 27310453 14 - TSS region transcription start site region 71378
Cpgi18636 7 27310449 to 27310718 269 CpG island CpG island 18636
Tssr71379 7 27310613 to 27310640 27 - TSS region transcription start site region 71379
Tssr71380 7 27310643 to 27310693 50 - TSS region transcription start site region 71380
Tssr71381 7 27310695 to 27310706 11 - TSS region transcription start site region 71381
Tssr71382 7 27311193 to 27311204 11 - TSS region transcription start site region 71382
Tssr71383 7 27311221 to 27311235 14 - TSS region transcription start site region 71383
Tssr65265 7 27311437 to 27311450 13 + TSS region transcription start site region 65265
Cpgi18637 7 27319408 to 27319727 319 CpG island CpG island 18637
Cpgi18638 7 27322037 to 27322452 415 CpG island CpG island 18638
Cpgi18639 7 27324985 to 27325272 287 CpG island CpG island 18639
Cpgi18640 7 27325502 to 27325989 487 CpG island CpG island 18640
Cpgi18641 7 27326430 to 27326871 441 CpG island CpG island 18641
Tssr71384 7 27327477 to 27327494 17 - TSS region transcription start site region 71384
Tssr71385 7 27328305 to 27328341 36 - TSS region transcription start site region 71385
Cpgi18642 7 27328703 to 27328908 205 CpG island CpG island 18642
Cpgi18643 7 27329291 to 27329959 668 CpG island CpG island 18643
Tssr71386 7 27329473 to 27329489 16 - TSS region transcription start site region 71386
Gm30543 7 27329804 to 27336812 7008 + lncRNA gene predicted gene, 30543
Tssr71387 7 27329881 to 27329885 4 - TSS region transcription start site region 71387
Cpgi18644 7 27330915 to 27331275 360 CpG island CpG island 18644
Cpgi18645 7 27332393 to 27334916 2523 CpG island CpG island 18645
Tssr71388 7 27333602 to 27333640 38 - TSS region transcription start site region 71388
Cpgi18646 7 27335983 to 27336774 791 CpG island CpG island 18646
Cpgi18647 7 27337375 to 27337842 467 CpG island CpG island 18647
Tssr71389 7 27337582 to 27337616 34 - TSS region transcription start site region 71389
Tssr71390 7 27337667 to 27337680 13 - TSS region transcription start site region 71390
Tssr71391 7 27339692 to 27339709 17 - TSS region transcription start site region 71391
Shkbp1 7 27342133 to 27356019 13886 - protein coding gene Sh3kbp1 binding protein 1
Gm20479 7 27352649 to 27357419 4770 - protein coding gene predicted gene 20479
Tssr71392 7 27355699 to 27355729 30 - TSS region transcription start site region 71392
Cpgi18648 7 27355812 to 27356478 666 CpG island CpG island 18648
Tssr71393 7 27355944 to 27355977 33 - TSS region transcription start site region 71393
Tssr71394 7 27355980 to 27356014 34 - TSS region transcription start site region 71394
Sptbn4 7 27356383 to 27447686 91303 - protein coding gene spectrin beta, non-erythrocytic 4
Cpgi18649 7 27357145 to 27357540 395 CpG island CpG island 18649
Tssr71395 7 27360112 to 27360136 24 - TSS region transcription start site region 71395
Tssr71396 7 27361328 to 27361340 12 - TSS region transcription start site region 71396
Tssr71397 7 27361343 to 27361360 17 - TSS region transcription start site region 71397
Cpgi18650 7 27361371 to 27362017 646 CpG island CpG island 18650
Cpgi18651 7 27363755 to 27364749 994 CpG island CpG island 18651
Tssr71398 7 27366534 to 27366564 30 - TSS region transcription start site region 71398
Cpgi18652 7 27367475 to 27368023 548 CpG island CpG island 18652
Cpgi18653 7 27371879 to 27372530 651 CpG island CpG island 18653
Cpgi18654 7 27375237 to 27375687 450 CpG island CpG island 18654
Cpgi18655 7 27396090 to 27397089 999 CpG island CpG island 18655
Tssr71399 7 27396542 to 27396566 24 - TSS region transcription start site region 71399
Tssr71400 7 27396570 to 27396615 45 - TSS region transcription start site region 71400
Cpgi18656 7 27402707 to 27403003 296 CpG island CpG island 18656
Cpgi18657 7 27404077 to 27405090 1013 CpG island CpG island 18657
Cpgi18658 7 27407881 to 27409430 1549 CpG island CpG island 18658
Cpgi18659 7 27432983 to 27433314 331 CpG island CpG island 18659