Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:26399564-27129571

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Cyp2s1-Cyp2a5)1Ding 7 25802476 to 26843264 1040788 chromosomal deletion deletion, Chr 7, Xinxin Ding 1
Nlrp9c 7 26364887 to 26403700 38813 - protein coding gene NLR family, pyrin domain containing 9C
Nlrp4a 7 26435113 to 26476142 41029 + protein coding gene NLR family, pyrin domain containing 4A
D7Mit112 7 26472526 to 26472669 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 112
Gm25947 7 26531184 to 26531293 109 + miRNA gene predicted gene, 25947
Nlrp9a 7 26535023 to 26574148 39125 + protein coding gene NLR family, pyrin domain containing 9A
Vmn1r185 7 26611119 to 26612078 959 - protein coding gene vomeronasal 1 receptor 185
Cyp2b23 7 26665227 to 26686430 21203 - protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 23
D7Mit114 7 26738144 to 26738294 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 114
Gm45034 7 26738583 to 26745863 7280 + pseudogene predicted gene 45034
Cyp2b19 7 26757142 to 26772630 15488 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 19
Tssr65184 7 26757153 to 26757171 18 + TSS region transcription start site region 65184
Tssr65185 7 26764389 to 26764397 8 + TSS region transcription start site region 65185
Tssr65186 7 26764449 to 26764474 25 + TSS region transcription start site region 65186
Tssr65187 7 26764488 to 26764505 17 + TSS region transcription start site region 65187
Tssr65188 7 26764530 to 26764539 9 + TSS region transcription start site region 65188
Tssr65189 7 26764546 to 26764549 3 + TSS region transcription start site region 65189
Tssr65190 7 26764564 to 26764571 7 + TSS region transcription start site region 65190
Tssr65191 7 26764656 to 26764668 12 + TSS region transcription start site region 65191
Tssr65192 7 26764672 to 26764677 5 + TSS region transcription start site region 65192
Tssr65193 7 26766708 to 26766719 11 + TSS region transcription start site region 65193
Tssr65194 7 26771768 to 26771801 33 + TSS region transcription start site region 65194
D7Mit144 7 26772606 to 26772751 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 144
Tssr65195 7 26784890 to 26784891 1 + TSS region transcription start site region 65195
Tssr65196 7 26808880 to 26808909 29 + TSS region transcription start site region 65196
Cyp2g1 7 26808927 to 26821197 12270 + protein coding gene cytochrome P450, family 2, subfamily g, polypeptide 1
Tssr65197 7 26816315 to 26816337 22 + TSS region transcription start site region 65197
Tssr65198 7 26835337 to 26835343 6 + TSS region transcription start site region 65198
Cyp2a5 7 26835339 to 26843264 7925 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 5
Cpgi18622 7 26836543 to 26836971 428 CpG island CpG island 18622
Api5-ps 7 26918773 to 26919339 566 - pseudogene apoptosis inhibitor 5, pseudogene
Cyp2a22 7 26931631 to 26939384 7753 - protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 22
Tssr71335 7 26939377 to 26939390 13 - TSS region transcription start site region 71335
Cyp2a21-ps 7 26945958 to 26952552 6594 + pseudogene cytochrome P450, family 2, subfamily a, polypeptide 21, pseudogene
Tssr65199 7 27029074 to 27029087 13 + TSS region transcription start site region 65199
Cyp2a12 7 27029090 to 27036818 7728 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 12
Tssr65200 7 27029644 to 27029655 11 + TSS region transcription start site region 65200
Tssr65201 7 27035549 to 27035579 30 + TSS region transcription start site region 65201
Gm4290 7 27046894 to 27047707 813 + pseudogene predicted gene 4290
Gm29754 7 27067456 to 27067813 357 + pseudogene predicted gene, 29754
Tssr65202 7 27119749 to 27119765 16 + TSS region transcription start site region 65202
Tssr65203 7 27119948 to 27119966 18 + TSS region transcription start site region 65203
Cyp2f2 7 27119955 to 27133660 13705 + protein coding gene cytochrome P450, family 2, subfamily f, polypeptide 2
Tssr65204 7 27120806 to 27120840 34 + TSS region transcription start site region 65204
Tssr65205 7 27121491 to 27121500 9 + TSS region transcription start site region 65205
Tssr65206 7 27121536 to 27121549 13 + TSS region transcription start site region 65206
Tssr65207 7 27121572 to 27121621 49 + TSS region transcription start site region 65207
Tssr65208 7 27121622 to 27121635 13 + TSS region transcription start site region 65208
Tssr65209 7 27121640 to 27121660 20 + TSS region transcription start site region 65209
Tssr65210 7 27121665 to 27121677 12 + TSS region transcription start site region 65210
Tssr65211 7 27121686 to 27121716 30 + TSS region transcription start site region 65211
Tssr65212 7 27121841 to 27121897 56 + TSS region transcription start site region 65212
Tssr71336 7 27121854 to 27121867 13 - TSS region transcription start site region 71336
Tssr65213 7 27121917 to 27121932 15 + TSS region transcription start site region 65213
Tssr71337 7 27121923 to 27121952 29 - TSS region transcription start site region 71337
Tssr65214 7 27121940 to 27121969 29 + TSS region transcription start site region 65214
Tssr65215 7 27122133 to 27122144 11 + TSS region transcription start site region 65215
Gm15883 7 27124481 to 27130674 6193 - antisense lncRNA gene predicted gene 15883
Tssr65216 7 27124613 to 27124627 14 + TSS region transcription start site region 65216
Tssr65217 7 27124640 to 27124679 39 + TSS region transcription start site region 65217
Tssr65218 7 27124846 to 27124857 11 + TSS region transcription start site region 65218
Tssr65219 7 27124897 to 27124906 9 + TSS region transcription start site region 65219
Tssr65220 7 27124932 to 27124971 39 + TSS region transcription start site region 65220
Tssr65221 7 27129182 to 27129296 114 + TSS region transcription start site region 65221