Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25832526-27112669

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Cyp2s1-Cyp2a5)1Ding 7 25802476 to 26843264 1040788 chromosomal deletion deletion, Chr 7, Xinxin Ding 1
Gm46015 7 25837950 to 25839958 2008 + lncRNA gene predicted gene, 46015
Gm30146 7 25860140 to 25869883 9743 + lincRNA gene predicted gene, 30146
Gm23921 7 25868945 to 25869051 106 + unclassified non-coding RNA gene predicted gene, 23921
Gm45228 7 25875325 to 25875676 351 + pseudogene predicted gene 45228
Gm6434 7 25882018 to 25882389 371 - pseudogene predicted gene 6434
Tssr65172 7 25897651 to 25897672 21 + TSS region transcription start site region 65172
Cyp2b10 7 25897658 to 25926624 28966 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 10
Tssr65173 7 25899575 to 25899582 7 + TSS region transcription start site region 65173
Tssr65174 7 25913937 to 25913946 9 + TSS region transcription start site region 65174
Cyp2b28-ps 7 25950226 to 25988455 38229 + pseudogene cytochrome P450, family 2, subfamily b, polypeptide 28, pseudogene
Gm45227 7 25950253 to 25950421 168 + pseudogene predicted gene 45227
Gm45225 7 25981502 to 25988460 6958 + pseudogene predicted gene 45225
Cyp2b27-ps 7 26004608 to 26028897 24289 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 27, pseudogene
BC026762 7 26009889 to 26012391 2502 + lincRNA gene cDNA sequence BC026762
Cyp2b13 7 26061497 to 26096197 34700 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 13
Cpgi18621 7 26071869 to 26072049 180 CpG island CpG island 18621
Rnf170-ps 7 26072073 to 26072931 858 + pseudogene ring finger protein 170, pseudogene
Tssr65175 7 26099125 to 26099129 4 + TSS region transcription start site region 65175
Gm29920 7 26099567 to 26100316 749 - pseudogene predicted gene, 29920
Cyp2b26-ps 7 26134753 to 26148592 13839 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 26, pseudogene
Cyp2b9 7 26173411 to 26210661 37250 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 9
Tssr65176 7 26174214 to 26174217 3 + TSS region transcription start site region 65176
Tssr65177 7 26187725 to 26187730 5 + TSS region transcription start site region 65177
Tssr71333 7 26188042 to 26188045 3 - TSS region transcription start site region 71333
Tssr71334 7 26188141 to 26188150 9 - TSS region transcription start site region 71334
Tssr65178 7 26189876 to 26189895 19 + TSS region transcription start site region 65178
Tssr65179 7 26215339 to 26215342 3 + TSS region transcription start site region 65179
Tssr65180 7 26221914 to 26221918 4 + TSS region transcription start site region 65180
Tssr2151 7 26222807 to 26222813 6 + TSS region transcription start site region 2151
Tssr65181 7 26224222 to 26224231 9 + TSS region transcription start site region 65181
Gm8902 7 26245903 to 26247955 2052 + pseudogene predicted gene 8902
Vmn1r-ps86 7 26255080 to 26255626 546 + pseudogene vomeronasal 1 receptor, pseudogene 86
Vmn1r184 7 26266831 to 26267775 944 + protein coding gene vomeronasal 1 receptor, 184
Gm44964 7 26292378 to 26292768 390 + pseudogene predicted gene 44964
Gm42375 7 26304421 to 26307094 2673 - antisense lncRNA gene predicted gene, 42375
Tssr65182 7 26307191 to 26307197 6 + TSS region transcription start site region 65182
Cyp2a4 7 26307192 to 26315088 7896 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 4
Nlrp9c 7 26364887 to 26403700 38813 - protein coding gene NLR family, pyrin domain containing 9C
Tssr65183 7 26386902 to 26386915 13 + TSS region transcription start site region 65183
Nlrp4a 7 26435113 to 26476142 41029 + protein coding gene NLR family, pyrin domain containing 4A
D7Mit112 7 26472526 to 26472669 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 112
Gm25947 7 26531184 to 26531293 109 + miRNA gene predicted gene, 25947
Nlrp9a 7 26535023 to 26574148 39125 + protein coding gene NLR family, pyrin domain containing 9A
Vmn1r185 7 26611119 to 26612078 959 - protein coding gene vomeronasal 1 receptor 185
Cyp2b23 7 26665227 to 26686430 21203 - protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 23
D7Mit114 7 26738144 to 26738294 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 114
Gm45034 7 26738583 to 26745863 7280 + pseudogene predicted gene 45034
Cyp2b19 7 26757142 to 26772630 15488 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 19
Tssr65184 7 26757153 to 26757171 18 + TSS region transcription start site region 65184
Tssr65185 7 26764389 to 26764397 8 + TSS region transcription start site region 65185
Tssr65186 7 26764449 to 26764474 25 + TSS region transcription start site region 65186
Tssr65187 7 26764488 to 26764505 17 + TSS region transcription start site region 65187
Tssr65188 7 26764530 to 26764539 9 + TSS region transcription start site region 65188
Tssr65189 7 26764546 to 26764549 3 + TSS region transcription start site region 65189
Tssr65190 7 26764564 to 26764571 7 + TSS region transcription start site region 65190
Tssr65191 7 26764656 to 26764668 12 + TSS region transcription start site region 65191
Tssr65192 7 26764672 to 26764677 5 + TSS region transcription start site region 65192
Tssr65193 7 26766708 to 26766719 11 + TSS region transcription start site region 65193
Tssr65194 7 26771768 to 26771801 33 + TSS region transcription start site region 65194
D7Mit144 7 26772606 to 26772751 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 144
Tssr65195 7 26784890 to 26784891 1 + TSS region transcription start site region 65195
Tssr65196 7 26808880 to 26808909 29 + TSS region transcription start site region 65196
Cyp2g1 7 26808927 to 26821197 12270 + protein coding gene cytochrome P450, family 2, subfamily g, polypeptide 1
Tssr65197 7 26816315 to 26816337 22 + TSS region transcription start site region 65197
Tssr65198 7 26835337 to 26835343 6 + TSS region transcription start site region 65198
Cyp2a5 7 26835339 to 26843264 7925 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 5
Cpgi18622 7 26836543 to 26836971 428 CpG island CpG island 18622
Api5-ps 7 26918773 to 26919339 566 - pseudogene apoptosis inhibitor 5, pseudogene
Cyp2a22 7 26931631 to 26939384 7753 - protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 22
Tssr71335 7 26939377 to 26939390 13 - TSS region transcription start site region 71335
Cyp2a21-ps 7 26945958 to 26952552 6594 + pseudogene cytochrome P450, family 2, subfamily a, polypeptide 21, pseudogene
Tssr65199 7 27029074 to 27029087 13 + TSS region transcription start site region 65199
Cyp2a12 7 27029090 to 27036818 7728 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 12
Tssr65200 7 27029644 to 27029655 11 + TSS region transcription start site region 65200
Tssr65201 7 27035549 to 27035579 30 + TSS region transcription start site region 65201
Gm4290 7 27046894 to 27047707 813 + pseudogene predicted gene 4290
Gm29754 7 27067456 to 27067813 357 + pseudogene predicted gene, 29754