Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25800080-26710626

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr2150 7 25801231 to 25801233 2 + TSS region transcription start site region 2150
Tssr71325 7 25801921 to 25801925 4 - TSS region transcription start site region 71325
Cyp2s1 7 25802476 to 25816530 14054 - protein coding gene cytochrome P450, family 2, subfamily s, polypeptide 1
Del(7Cyp2s1-Cyp2a5)1Ding 7 25802476 to 26843264 1040788 chromosomal deletion deletion, Chr 7, Xinxin Ding 1
Tssr71326 7 25803431 to 25803450 19 - TSS region transcription start site region 71326
Tssr71327 7 25803613 to 25803629 16 - TSS region transcription start site region 71327
Cpgi18619 7 25805765 to 25806089 324 CpG island CpG island 18619
Gm45226 7 25810175 to 25810462 287 + pseudogene predicted gene 45226
Cpgi18620 7 25816267 to 25816932 665 CpG island CpG island 18620
Tssr71328 7 25816500 to 25816535 35 - TSS region transcription start site region 71328
Tssr71329 7 25816548 to 25816563 15 - TSS region transcription start site region 71329
Tssr71330 7 25816565 to 25816568 3 - TSS region transcription start site region 71330
Tssr71331 7 25816616 to 25816628 12 - TSS region transcription start site region 71331
Gm26707 7 25816654 to 25820654 4000 + lincRNA gene predicted gene, 26707
Tssr71332 7 25816680 to 25816723 43 - TSS region transcription start site region 71332
Gm4613 7 25828602 to 25828877 275 - pseudogene predicted gene 4613
Gm24865 7 25828632 to 25828727 95 - miRNA gene predicted gene, 24865
Gm46015 7 25837950 to 25839958 2008 + lncRNA gene predicted gene, 46015
Gm30146 7 25860140 to 25869883 9743 + lincRNA gene predicted gene, 30146
Gm23921 7 25868945 to 25869051 106 + unclassified non-coding RNA gene predicted gene, 23921
Gm45228 7 25875325 to 25875676 351 + pseudogene predicted gene 45228
Gm6434 7 25882018 to 25882389 371 - pseudogene predicted gene 6434
Tssr65172 7 25897651 to 25897672 21 + TSS region transcription start site region 65172
Cyp2b10 7 25897658 to 25926624 28966 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 10
Tssr65173 7 25899575 to 25899582 7 + TSS region transcription start site region 65173
Tssr65174 7 25913937 to 25913946 9 + TSS region transcription start site region 65174
Cyp2b28-ps 7 25950226 to 25988455 38229 + pseudogene cytochrome P450, family 2, subfamily b, polypeptide 28, pseudogene
Gm45227 7 25950253 to 25950421 168 + pseudogene predicted gene 45227
Gm45225 7 25981502 to 25988460 6958 + pseudogene predicted gene 45225
Cyp2b27-ps 7 26004608 to 26028897 24289 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 27, pseudogene
BC026762 7 26009889 to 26012391 2502 + lincRNA gene cDNA sequence BC026762
Cyp2b13 7 26061497 to 26096197 34700 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 13
Cpgi18621 7 26071869 to 26072049 180 CpG island CpG island 18621
Rnf170-ps 7 26072073 to 26072931 858 + pseudogene ring finger protein 170, pseudogene
Tssr65175 7 26099125 to 26099129 4 + TSS region transcription start site region 65175
Gm29920 7 26099567 to 26100316 749 - pseudogene predicted gene, 29920
Cyp2b26-ps 7 26134753 to 26148592 13839 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 26, pseudogene
Cyp2b9 7 26173411 to 26210661 37250 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 9
Tssr65176 7 26174214 to 26174217 3 + TSS region transcription start site region 65176
Tssr65177 7 26187725 to 26187730 5 + TSS region transcription start site region 65177
Tssr71333 7 26188042 to 26188045 3 - TSS region transcription start site region 71333
Tssr71334 7 26188141 to 26188150 9 - TSS region transcription start site region 71334
Tssr65178 7 26189876 to 26189895 19 + TSS region transcription start site region 65178
Tssr65179 7 26215339 to 26215342 3 + TSS region transcription start site region 65179
Tssr65180 7 26221914 to 26221918 4 + TSS region transcription start site region 65180
Tssr2151 7 26222807 to 26222813 6 + TSS region transcription start site region 2151
Tssr65181 7 26224222 to 26224231 9 + TSS region transcription start site region 65181
Gm8902 7 26245903 to 26247955 2052 + pseudogene predicted gene 8902
Vmn1r-ps86 7 26255080 to 26255626 546 + pseudogene vomeronasal 1 receptor, pseudogene 86
Vmn1r184 7 26266831 to 26267775 944 + protein coding gene vomeronasal 1 receptor, 184
Gm44964 7 26292378 to 26292768 390 + pseudogene predicted gene 44964
Gm42375 7 26304421 to 26307094 2673 - antisense lncRNA gene predicted gene, 42375
Tssr65182 7 26307191 to 26307197 6 + TSS region transcription start site region 65182
Cyp2a4 7 26307192 to 26315088 7896 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 4
Nlrp9c 7 26364887 to 26403700 38813 - protein coding gene NLR family, pyrin domain containing 9C
Tssr65183 7 26386902 to 26386915 13 + TSS region transcription start site region 65183
Nlrp4a 7 26435113 to 26476142 41029 + protein coding gene NLR family, pyrin domain containing 4A
D7Mit112 7 26472526 to 26472669 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 112
Gm25947 7 26531184 to 26531293 109 + miRNA gene predicted gene, 25947
Nlrp9a 7 26535023 to 26574148 39125 + protein coding gene NLR family, pyrin domain containing 9A
Vmn1r185 7 26611119 to 26612078 959 - protein coding gene vomeronasal 1 receptor 185
Cyp2b23 7 26665227 to 26686430 21203 - protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 23