Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25772189-31422196

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1983 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Axl 7 25757273 to 25788705 31432 - protein coding gene AXL receptor tyrosine kinase
Tssr71316 7 25772190 to 25772223 33 - TSS region transcription start site region 71316
Tssr71317 7 25772226 to 25772320 94 - TSS region transcription start site region 71317
Cpgi18618 7 25781450 to 25781906 456 CpG island CpG island 18618
Tssr71318 7 25786993 to 25787006 13 - TSS region transcription start site region 71318
Tssr71319 7 25787049 to 25787062 13 - TSS region transcription start site region 71319
Tssr71320 7 25787406 to 25787418 12 - TSS region transcription start site region 71320
Tssr71321 7 25788493 to 25788513 20 - TSS region transcription start site region 71321
Tssr71322 7 25788514 to 25788525 11 - TSS region transcription start site region 71322
Tssr71323 7 25788533 to 25788554 21 - TSS region transcription start site region 71323
Tssr71324 7 25788635 to 25788710 75 - TSS region transcription start site region 71324
Gm29763 7 25792228 to 25792843 615 - pseudogene predicted gene, 29763
Tssr2150 7 25801231 to 25801233 2 + TSS region transcription start site region 2150
Tssr71325 7 25801921 to 25801925 4 - TSS region transcription start site region 71325
Cyp2s1 7 25802476 to 25816530 14054 - protein coding gene cytochrome P450, family 2, subfamily s, polypeptide 1
Del(7Cyp2s1-Cyp2a5)1Ding 7 25802476 to 26843264 1040788 chromosomal deletion deletion, Chr 7, Xinxin Ding 1
Tssr71326 7 25803431 to 25803450 19 - TSS region transcription start site region 71326
Tssr71327 7 25803613 to 25803629 16 - TSS region transcription start site region 71327
Cpgi18619 7 25805765 to 25806089 324 CpG island CpG island 18619
Gm45226 7 25810175 to 25810462 287 + pseudogene predicted gene 45226
Cpgi18620 7 25816267 to 25816932 665 CpG island CpG island 18620
Tssr71328 7 25816500 to 25816535 35 - TSS region transcription start site region 71328
Tssr71329 7 25816548 to 25816563 15 - TSS region transcription start site region 71329
Tssr71330 7 25816565 to 25816568 3 - TSS region transcription start site region 71330
Tssr71331 7 25816616 to 25816628 12 - TSS region transcription start site region 71331
Gm26707 7 25816654 to 25820654 4000 + lincRNA gene predicted gene, 26707
Tssr71332 7 25816680 to 25816723 43 - TSS region transcription start site region 71332
Gm4613 7 25828602 to 25828877 275 - pseudogene predicted gene 4613
Gm24865 7 25828632 to 25828727 95 - miRNA gene predicted gene, 24865
Gm46015 7 25837950 to 25839958 2008 + lncRNA gene predicted gene, 46015
Gm30146 7 25860140 to 25869883 9743 + lincRNA gene predicted gene, 30146
Gm23921 7 25868945 to 25869051 106 + unclassified non-coding RNA gene predicted gene, 23921
Gm45228 7 25875325 to 25875676 351 + pseudogene predicted gene 45228
Gm6434 7 25882018 to 25882389 371 - pseudogene predicted gene 6434
Tssr65172 7 25897651 to 25897672 21 + TSS region transcription start site region 65172
Cyp2b10 7 25897658 to 25926624 28966 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 10
Tssr65173 7 25899575 to 25899582 7 + TSS region transcription start site region 65173
Tssr65174 7 25913937 to 25913946 9 + TSS region transcription start site region 65174
Cyp2b28-ps 7 25950226 to 25988455 38229 + pseudogene cytochrome P450, family 2, subfamily b, polypeptide 28, pseudogene
Gm45227 7 25950253 to 25950421 168 + pseudogene predicted gene 45227
Gm45225 7 25981502 to 25988460 6958 + pseudogene predicted gene 45225
Cyp2b27-ps 7 26004608 to 26028897 24289 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 27, pseudogene
BC026762 7 26009889 to 26012391 2502 + lincRNA gene cDNA sequence BC026762
Cyp2b13 7 26061497 to 26096197 34700 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 13
Cpgi18621 7 26071869 to 26072049 180 CpG island CpG island 18621
Rnf170-ps 7 26072073 to 26072931 858 + pseudogene ring finger protein 170, pseudogene
Tssr65175 7 26099125 to 26099129 4 + TSS region transcription start site region 65175
Gm29920 7 26099567 to 26100316 749 - pseudogene predicted gene, 29920
Cyp2b26-ps 7 26134753 to 26148592 13839 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 26, pseudogene
Cyp2b9 7 26173411 to 26210661 37250 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 9
Tssr65176 7 26174214 to 26174217 3 + TSS region transcription start site region 65176
Tssr65177 7 26187725 to 26187730 5 + TSS region transcription start site region 65177
Tssr71333 7 26188042 to 26188045 3 - TSS region transcription start site region 71333
Tssr71334 7 26188141 to 26188150 9 - TSS region transcription start site region 71334
Tssr65178 7 26189876 to 26189895 19 + TSS region transcription start site region 65178
Tssr65179 7 26215339 to 26215342 3 + TSS region transcription start site region 65179
Tssr65180 7 26221914 to 26221918 4 + TSS region transcription start site region 65180
Tssr2151 7 26222807 to 26222813 6 + TSS region transcription start site region 2151
Tssr65181 7 26224222 to 26224231 9 + TSS region transcription start site region 65181
Gm8902 7 26245903 to 26247955 2052 + pseudogene predicted gene 8902
Vmn1r-ps86 7 26255080 to 26255626 546 + pseudogene vomeronasal 1 receptor, pseudogene 86
Vmn1r184 7 26266831 to 26267775 944 + protein coding gene vomeronasal 1 receptor, 184
Gm44964 7 26292378 to 26292768 390 + pseudogene predicted gene 44964
Gm42375 7 26304421 to 26307094 2673 - antisense lncRNA gene predicted gene, 42375
Tssr65182 7 26307191 to 26307197 6 + TSS region transcription start site region 65182
Cyp2a4 7 26307192 to 26315088 7896 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 4
Nlrp9c 7 26364887 to 26403700 38813 - protein coding gene NLR family, pyrin domain containing 9C
Tssr65183 7 26386902 to 26386915 13 + TSS region transcription start site region 65183
Nlrp4a 7 26435113 to 26476142 41029 + protein coding gene NLR family, pyrin domain containing 4A
D7Mit112 7 26472526 to 26472669 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 112
Gm25947 7 26531184 to 26531293 109 + miRNA gene predicted gene, 25947
Nlrp9a 7 26535023 to 26574148 39125 + protein coding gene NLR family, pyrin domain containing 9A
Vmn1r185 7 26611119 to 26612078 959 - protein coding gene vomeronasal 1 receptor 185
Cyp2b23 7 26665227 to 26686430 21203 - protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 23
D7Mit114 7 26738144 to 26738294 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 114
Gm45034 7 26738583 to 26745863 7280 + pseudogene predicted gene 45034
Cyp2b19 7 26757142 to 26772630 15488 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 19
Tssr65184 7 26757153 to 26757171 18 + TSS region transcription start site region 65184
Tssr65185 7 26764389 to 26764397 8 + TSS region transcription start site region 65185
Tssr65186 7 26764449 to 26764474 25 + TSS region transcription start site region 65186
Tssr65187 7 26764488 to 26764505 17 + TSS region transcription start site region 65187
Tssr65188 7 26764530 to 26764539 9 + TSS region transcription start site region 65188
Tssr65189 7 26764546 to 26764549 3 + TSS region transcription start site region 65189
Tssr65190 7 26764564 to 26764571 7 + TSS region transcription start site region 65190
Tssr65191 7 26764656 to 26764668 12 + TSS region transcription start site region 65191
Tssr65192 7 26764672 to 26764677 5 + TSS region transcription start site region 65192
Tssr65193 7 26766708 to 26766719 11 + TSS region transcription start site region 65193
Tssr65194 7 26771768 to 26771801 33 + TSS region transcription start site region 65194
D7Mit144 7 26772606 to 26772751 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 144
Tssr65195 7 26784890 to 26784891 1 + TSS region transcription start site region 65195
Tssr65196 7 26808880 to 26808909 29 + TSS region transcription start site region 65196
Cyp2g1 7 26808927 to 26821197 12270 + protein coding gene cytochrome P450, family 2, subfamily g, polypeptide 1
Tssr65197 7 26816315 to 26816337 22 + TSS region transcription start site region 65197
Tssr65198 7 26835337 to 26835343 6 + TSS region transcription start site region 65198
Cyp2a5 7 26835339 to 26843264 7925 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 5
Cpgi18622 7 26836543 to 26836971 428 CpG island CpG island 18622
Api5-ps 7 26918773 to 26919339 566 - pseudogene apoptosis inhibitor 5, pseudogene
Cyp2a22 7 26931631 to 26939384 7753 - protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 22
Tssr71335 7 26939377 to 26939390 13 - TSS region transcription start site region 71335
Cyp2a21-ps 7 26945958 to 26952552 6594 + pseudogene cytochrome P450, family 2, subfamily a, polypeptide 21, pseudogene
Tssr65199 7 27029074 to 27029087 13 + TSS region transcription start site region 65199
Cyp2a12 7 27029090 to 27036818 7728 + protein coding gene cytochrome P450, family 2, subfamily a, polypeptide 12
Tssr65200 7 27029644 to 27029655 11 + TSS region transcription start site region 65200
Tssr65201 7 27035549 to 27035579 30 + TSS region transcription start site region 65201
Gm4290 7 27046894 to 27047707 813 + pseudogene predicted gene 4290
Gm29754 7 27067456 to 27067813 357 + pseudogene predicted gene, 29754
Tssr65202 7 27119749 to 27119765 16 + TSS region transcription start site region 65202
Tssr65203 7 27119948 to 27119966 18 + TSS region transcription start site region 65203
Cyp2f2 7 27119955 to 27133660 13705 + protein coding gene cytochrome P450, family 2, subfamily f, polypeptide 2
Tssr65204 7 27120806 to 27120840 34 + TSS region transcription start site region 65204
Tssr65205 7 27121491 to 27121500 9 + TSS region transcription start site region 65205
Tssr65206 7 27121536 to 27121549 13 + TSS region transcription start site region 65206
Tssr65207 7 27121572 to 27121621 49 + TSS region transcription start site region 65207
Tssr65208 7 27121622 to 27121635 13 + TSS region transcription start site region 65208
Tssr65209 7 27121640 to 27121660 20 + TSS region transcription start site region 65209
Tssr65210 7 27121665 to 27121677 12 + TSS region transcription start site region 65210
Tssr65211 7 27121686 to 27121716 30 + TSS region transcription start site region 65211
Tssr65212 7 27121841 to 27121897 56 + TSS region transcription start site region 65212
Tssr71336 7 27121854 to 27121867 13 - TSS region transcription start site region 71336
Tssr65213 7 27121917 to 27121932 15 + TSS region transcription start site region 65213
Tssr71337 7 27121923 to 27121952 29 - TSS region transcription start site region 71337
Tssr65214 7 27121940 to 27121969 29 + TSS region transcription start site region 65214
Tssr65215 7 27122133 to 27122144 11 + TSS region transcription start site region 65215
Gm15883 7 27124481 to 27130674 6193 - antisense lncRNA gene predicted gene 15883
Tssr65216 7 27124613 to 27124627 14 + TSS region transcription start site region 65216
Tssr65217 7 27124640 to 27124679 39 + TSS region transcription start site region 65217
Tssr65218 7 27124846 to 27124857 11 + TSS region transcription start site region 65218
Tssr65219 7 27124897 to 27124906 9 + TSS region transcription start site region 65219
Tssr65220 7 27124932 to 27124971 39 + TSS region transcription start site region 65220
Tssr65221 7 27129182 to 27129296 114 + TSS region transcription start site region 65221
Tssr65222 7 27129707 to 27129720 13 + TSS region transcription start site region 65222
Tssr65223 7 27129755 to 27129762 7 + TSS region transcription start site region 65223
Tssr71338 7 27129757 to 27129788 31 - TSS region transcription start site region 71338
Tssr65224 7 27129787 to 27129799 12 + TSS region transcription start site region 65224
Tssr65225 7 27129808 to 27129815 7 + TSS region transcription start site region 65225
Tssr65226 7 27129829 to 27129863 34 + TSS region transcription start site region 65226
Tssr65227 7 27130284 to 27130353 69 + TSS region transcription start site region 65227
Tssr71339 7 27130329 to 27130380 51 - TSS region transcription start site region 71339
Tssr65228 7 27130370 to 27130404 34 + TSS region transcription start site region 65228
Tssr71340 7 27130418 to 27130437 19 - TSS region transcription start site region 71340
Cpgi18623 7 27131086 to 27131340 254 CpG island CpG island 18623
Tssr71341 7 27131188 to 27131215 27 - TSS region transcription start site region 71341
Tssr65229 7 27131200 to 27131211 11 + TSS region transcription start site region 65229
Tssr65230 7 27131220 to 27131252 32 + TSS region transcription start site region 65230
Tssr71342 7 27131234 to 27131256 22 - TSS region transcription start site region 71342
Tssr71343 7 27131260 to 27131287 27 - TSS region transcription start site region 71343
Tssr65231 7 27131268 to 27131314 46 + TSS region transcription start site region 65231
Tssr71344 7 27131291 to 27131322 31 - TSS region transcription start site region 71344
Tssr65232 7 27131320 to 27131331 11 + TSS region transcription start site region 65232
Tssr65233 7 27132454 to 27132516 62 + TSS region transcription start site region 65233
Tssr71345 7 27132506 to 27132534 28 - TSS region transcription start site region 71345
Tssr65234 7 27132523 to 27132554 31 + TSS region transcription start site region 65234
Tssr65235 7 27132558 to 27132570 12 + TSS region transcription start site region 65235
Tssr65236 7 27132576 to 27132596 20 + TSS region transcription start site region 65236
Tssr65237 7 27133210 to 27133223 13 + TSS region transcription start site region 65237
Tssr65238 7 27133244 to 27133268 24 + TSS region transcription start site region 65238
Tssr71346 7 27133268 to 27133288 20 - TSS region transcription start site region 71346
Tssr65239 7 27133316 to 27133336 20 + TSS region transcription start site region 65239
Tssr71347 7 27133319 to 27133341 22 - TSS region transcription start site region 71347
Tssr65240 7 27133345 to 27133378 33 + TSS region transcription start site region 65240
Tssr65241 7 27133430 to 27133457 27 + TSS region transcription start site region 65241
Tssr71348 7 27133467 to 27133495 28 - TSS region transcription start site region 71348
Tssr65242 7 27133475 to 27133486 11 + TSS region transcription start site region 65242
Tssr65243 7 27133490 to 27133516 26 + TSS region transcription start site region 65243
Tssr71349 7 27133512 to 27133538 26 - TSS region transcription start site region 71349
Tssr65244 7 27133518 to 27133528 10 + TSS region transcription start site region 65244
Tssr65245 7 27133574 to 27133587 13 + TSS region transcription start site region 65245
Tssr71350 7 27133656 to 27133665 9 - TSS region transcription start site region 71350
Gm44640 7 27148390 to 27148636 246 - pseudogene predicted gene 44640
Cyp2t4 7 27153714 to 27158564 4850 + protein coding gene cytochrome P450, family 2, subfamily t, polypeptide 4
Cpgi18624 7 27156028 to 27156180 152 CpG island CpG island 18624
Egln2 7 27158658 to 27166802 8144 - protein coding gene egl-9 family hypoxia-inducible factor 2
Cpgi18625 7 27164624 to 27164822 198 CpG island CpG island 18625
Cpgi18626 7 27165991 to 27167179 1188 CpG island CpG island 18626
Tssr71351 7 27166382 to 27166393 11 - TSS region transcription start site region 71351
Tssr71352 7 27166427 to 27166467 40 - TSS region transcription start site region 71352
Tssr71353 7 27166470 to 27166522 52 - TSS region transcription start site region 71353
Tssr2152 7 27166540 to 27166551 11 - TSS region transcription start site region 2152
Tssr71354 7 27166712 to 27166724 12 - TSS region transcription start site region 71354
Tssr71355 7 27166732 to 27166765 33 - TSS region transcription start site region 71355
Gm21983 7 27168430 to 27181086 12656 - protein coding gene predicted gene 21983
Rab4b 7 27168433 to 27178883 10450 - protein coding gene RAB4B, member RAS oncogene family
Tssr71356 7 27168685 to 27168720 35 - TSS region transcription start site region 71356
Tssr71357 7 27168728 to 27168746 18 - TSS region transcription start site region 71357
Tssr71358 7 27174552 to 27174576 24 - TSS region transcription start site region 71358
Tssr71359 7 27174581 to 27174603 22 - TSS region transcription start site region 71359
Mir3101 7 27176006 to 27176093 87 - miRNA gene microRNA 3101
Cpgi18627 7 27178552 to 27179269 717 CpG island CpG island 18627
Tssr71360 7 27178814 to 27178829 15 - TSS region transcription start site region 71360
Tssr71361 7 27178835 to 27178888 53 - TSS region transcription start site region 71361
Tssr71362 7 27178912 to 27178923 11 - TSS region transcription start site region 71362
Mia 7 27179741 to 27181149 1408 - protein coding gene melanoma inhibitory activity
Tssr65246 7 27179742 to 27179749 7 + TSS region transcription start site region 65246
Tssr71363 7 27181047 to 27181137 90 - TSS region transcription start site region 71363
Tssr71364 7 27181151 to 27181162 11 - TSS region transcription start site region 71364
Snrpa 7 27187006 to 27196271 9265 - protein coding gene small nuclear ribonucleoprotein polypeptide A
Tssr71365 7 27189469 to 27189489 20 - TSS region transcription start site region 71365
Tssr65247 7 27195121 to 27195123 2 + TSS region transcription start site region 65247
Tssr65248 7 27195138 to 27195143 5 + TSS region transcription start site region 65248
Tssr65249 7 27195148 to 27195159 11 + TSS region transcription start site region 65249