Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25654170-25754223

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bckdha 7 25629852 to 25658785 28933 - protein coding gene branched chain ketoacid dehydrogenase E1, alpha polypeptide
Tssr71278 7 25655847 to 25655851 4 - TSS region transcription start site region 71278
Cpgi18609 7 25658629 to 25659485 856 CpG island CpG island 18609
Tssr71279 7 25658726 to 25658761 35 - TSS region transcription start site region 71279
Tssr65143 7 25659148 to 25659157 9 + TSS region transcription start site region 65143
Exosc5 7 25659153 to 25668032 8879 + protein coding gene exosome component 5
Tssr65144 7 25659164 to 25659236 72 + TSS region transcription start site region 65144
Tssr65145 7 25659401 to 25659409 8 + TSS region transcription start site region 65145
Tssr65146 7 25659424 to 25659446 22 + TSS region transcription start site region 65146
Tssr65147 7 25659450 to 25659461 11 + TSS region transcription start site region 65147
Tmem91 7 25669139 to 25675166 6027 - protein coding gene transmembrane protein 91
Tssr65148 7 25670443 to 25670448 5 + TSS region transcription start site region 65148
Cpgi18610 7 25674591 to 25675239 648 CpG island CpG island 18610
Tssr71280 7 25675100 to 25675187 87 - TSS region transcription start site region 71280
D7Mit265 7 25678573 to 25678697 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 265
Tssr71281 7 25679061 to 25679108 47 - TSS region transcription start site region 71281
Cpgi18611 7 25680556 to 25681152 596 CpG island CpG island 18611
B9d2 7 25680780 to 25686558 5778 + protein coding gene B9 protein domain 2
Tssr65149 7 25680780 to 25680834 54 + TSS region transcription start site region 65149
Tssr65150 7 25680842 to 25680861 19 + TSS region transcription start site region 65150
Tssr71282 7 25681018 to 25681034 16 - TSS region transcription start site region 71282
Tssr65151 7 25681177 to 25681191 14 + TSS region transcription start site region 65151
Cpgi18612 7 25686113 to 25688296 2183 CpG island CpG island 18612
Tssr65152 7 25686994 to 25687012 18 + TSS region transcription start site region 65152
Tgfb1 7 25687002 to 25705077 18075 + protein coding gene transforming growth factor, beta 1
Skts14 7 25687002 to 25705077 18075 QTL skin tumor susceptibility 14
Tssr65153 7 25687125 to 25687136 11 + TSS region transcription start site region 65153
Tssr71283 7 25687264 to 25687279 15 - TSS region transcription start site region 71283
Tssr65154 7 25687277 to 25687341 64 + TSS region transcription start site region 65154
Tssr65155 7 25687365 to 25687377 12 + TSS region transcription start site region 65155
Tssr65156 7 25687481 to 25687540 59 + TSS region transcription start site region 65156
Tssr71284 7 25687537 to 25687573 36 - TSS region transcription start site region 71284
Tssr65157 7 25687541 to 25687569 28 + TSS region transcription start site region 65157
Tssr65158 7 25687571 to 25687583 12 + TSS region transcription start site region 65158
Tssr65159 7 25687637 to 25687648 11 + TSS region transcription start site region 65159
Tssr65160 7 25687838 to 25687882 44 + TSS region transcription start site region 65160
Tssr65161 7 25688094 to 25688123 29 + TSS region transcription start site region 65161
Tssr65162 7 25688129 to 25688148 19 + TSS region transcription start site region 65162
Cpgi18613 7 25688604 to 25689688 1084 CpG island CpG island 18613
Tssr71285 7 25689100 to 25689109 9 - TSS region transcription start site region 71285
Tssr71286 7 25689120 to 25689141 21 - TSS region transcription start site region 71286
Tssr71287 7 25689148 to 25689169 21 - TSS region transcription start site region 71287
Tssr65163 7 25694238 to 25694253 15 + TSS region transcription start site region 65163
Tssr65164 7 25697191 to 25697206 15 + TSS region transcription start site region 65164
Tssr65165 7 25704170 to 25704223 53 + TSS region transcription start site region 65165
Cpgi18614 7 25704714 to 25705193 479 CpG island CpG island 18614
Tssr65166 7 25704777 to 25704802 25 + TSS region transcription start site region 65166
Tssr65167 7 25704809 to 25704833 24 + TSS region transcription start site region 65167
Ccdc97 7 25711106 to 25719088 7982 - protein coding gene coiled-coil domain containing 97
Tssr71288 7 25712133 to 25712147 14 - TSS region transcription start site region 71288
Tssr71289 7 25712558 to 25712569 11 - TSS region transcription start site region 71289
Tssr71290 7 25718684 to 25718723 39 - TSS region transcription start site region 71290
Tssr71291 7 25718801 to 25718815 14 - TSS region transcription start site region 71291
Cpgi18615 7 25718848 to 25719253 405 CpG island CpG island 18615
Tssr71292 7 25718976 to 25719062 86 - TSS region transcription start site region 71292
Tssr65168 7 25719178 to 25719181 3 + TSS region transcription start site region 65168
Hnrnpul1 7 25721165 to 25754757 33592 - protein coding gene heterogeneous nuclear ribonucleoprotein U-like 1
Tssr71293 7 25721718 to 25721728 10 - TSS region transcription start site region 71293
Tssr71294 7 25722856 to 25722878 22 - TSS region transcription start site region 71294
Tssr65169 7 25722885 to 25722897 12 + TSS region transcription start site region 65169
Tssr71295 7 25722925 to 25722956 31 - TSS region transcription start site region 71295
Tssr71296 7 25724733 to 25724835 102 - TSS region transcription start site region 71296
Tssr71297 7 25726014 to 25726049 35 - TSS region transcription start site region 71297
Tssr71298 7 25733092 to 25733112 20 - TSS region transcription start site region 71298
Tssr71299 7 25736955 to 25736960 5 - TSS region transcription start site region 71299
Tssr71300 7 25745230 to 25745242 12 - TSS region transcription start site region 71300
Tssr71301 7 25748423 to 25748458 35 - TSS region transcription start site region 71301
D7Mit307 7 25752242 to 25752347 105 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 307
Cpgi18616 7 25753949 to 25755333 1384 CpG island CpG island 18616