Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25540835-25690859

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4732471J01Rik 7 25376819 to 25566417 189598 + antisense lncRNA gene RIKEN cDNA 4732471J01 gene
Gm29918 7 25577074 to 25577798 724 - lincRNA gene predicted gene, 29918
Gm38569 7 25584224 to 25594776 10552 + lincRNA gene predicted gene, 38569
Tssr65137 7 25601285 to 25601294 9 + TSS region transcription start site region 65137
Gm4607 7 25601326 to 25601902 576 + pseudogene predicted gene 4607
Cpgi18605 7 25601375 to 25601546 171 CpG island CpG island 18605
Erich4 7 25614621 to 25615892 1271 - protein coding gene glutamate rich 4
Tssr71274 7 25615807 to 25615814 7 - TSS region transcription start site region 71274
Tssr71275 7 25615835 to 25615859 24 - TSS region transcription start site region 71275
Tssr71276 7 25615874 to 25615886 12 - TSS region transcription start site region 71276
D7Mit113 7 25616709 to 25616885 176 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 113
Gm38969 7 25618668 to 25619524 856 - lncRNA gene predicted gene, 38969
Cpgi18606 7 25619059 to 25619761 702 CpG island CpG island 18606
Tssr65138 7 25619404 to 25619446 42 + TSS region transcription start site region 65138
Dmac2 7 25619414 to 25625550 6136 + protein coding gene distal membrane arm assembly complex 2
Tssr65139 7 25627154 to 25627168 14 + TSS region transcription start site region 65139
Tssr65140 7 25627181 to 25627196 15 + TSS region transcription start site region 65140
Cpgi18607 7 25627335 to 25627540 205 CpG island CpG island 18607
B3gnt8 7 25627588 to 25629492 1904 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
Tssr65141 7 25627604 to 25627652 48 + TSS region transcription start site region 65141
Bckdha 7 25629852 to 25658785 28933 - protein coding gene branched chain ketoacid dehydrogenase E1, alpha polypeptide
Cpgi18608 7 25633163 to 25633384 221 CpG island CpG island 18608
Tssr65142 7 25644897 to 25644900 3 + TSS region transcription start site region 65142
B230201I24Rik 7 25650482 to 25651138 656 unclassified gene RIKEN cDNA B230201I24 gene
Tssr71277 7 25651333 to 25651375 42 - TSS region transcription start site region 71277
Tssr71278 7 25655847 to 25655851 4 - TSS region transcription start site region 71278
Cpgi18609 7 25658629 to 25659485 856 CpG island CpG island 18609
Tssr71279 7 25658726 to 25658761 35 - TSS region transcription start site region 71279
Tssr65143 7 25659148 to 25659157 9 + TSS region transcription start site region 65143
Exosc5 7 25659153 to 25668032 8879 + protein coding gene exosome component 5
Tssr65144 7 25659164 to 25659236 72 + TSS region transcription start site region 65144
Tssr65145 7 25659401 to 25659409 8 + TSS region transcription start site region 65145
Tssr65146 7 25659424 to 25659446 22 + TSS region transcription start site region 65146
Tssr65147 7 25659450 to 25659461 11 + TSS region transcription start site region 65147
Tmem91 7 25669139 to 25675166 6027 - protein coding gene transmembrane protein 91
Tssr65148 7 25670443 to 25670448 5 + TSS region transcription start site region 65148
Cpgi18610 7 25674591 to 25675239 648 CpG island CpG island 18610
Tssr71280 7 25675100 to 25675187 87 - TSS region transcription start site region 71280
D7Mit265 7 25678573 to 25678697 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 265
Tssr71281 7 25679061 to 25679108 47 - TSS region transcription start site region 71281
Cpgi18611 7 25680556 to 25681152 596 CpG island CpG island 18611
B9d2 7 25680780 to 25686558 5778 + protein coding gene B9 protein domain 2
Tssr65149 7 25680780 to 25680834 54 + TSS region transcription start site region 65149
Tssr65150 7 25680842 to 25680861 19 + TSS region transcription start site region 65150
Tssr71282 7 25681018 to 25681034 16 - TSS region transcription start site region 71282
Tssr65151 7 25681177 to 25681191 14 + TSS region transcription start site region 65151
Cpgi18612 7 25686113 to 25688296 2183 CpG island CpG island 18612
Tssr65152 7 25686994 to 25687012 18 + TSS region transcription start site region 65152
Tgfb1 7 25687002 to 25705077 18075 + protein coding gene transforming growth factor, beta 1
Skts14 7 25687002 to 25705077 18075 QTL skin tumor susceptibility 14
Tssr65153 7 25687125 to 25687136 11 + TSS region transcription start site region 65153
Tssr71283 7 25687264 to 25687279 15 - TSS region transcription start site region 71283
Tssr65154 7 25687277 to 25687341 64 + TSS region transcription start site region 65154
Tssr65155 7 25687365 to 25687377 12 + TSS region transcription start site region 65155
Tssr65156 7 25687481 to 25687540 59 + TSS region transcription start site region 65156
Tssr71284 7 25687537 to 25687573 36 - TSS region transcription start site region 71284
Tssr65157 7 25687541 to 25687569 28 + TSS region transcription start site region 65157
Tssr65158 7 25687571 to 25687583 12 + TSS region transcription start site region 65158
Tssr65159 7 25687637 to 25687648 11 + TSS region transcription start site region 65159
Tssr65160 7 25687838 to 25687882 44 + TSS region transcription start site region 65160
Tssr65161 7 25688094 to 25688123 29 + TSS region transcription start site region 65161
Tssr65162 7 25688129 to 25688148 19 + TSS region transcription start site region 65162
Cpgi18613 7 25688604 to 25689688 1084 CpG island CpG island 18613
Tssr71285 7 25689100 to 25689109 9 - TSS region transcription start site region 71285
Tssr71286 7 25689120 to 25689141 21 - TSS region transcription start site region 71286
Tssr71287 7 25689148 to 25689169 21 - TSS region transcription start site region 71287