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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25406042-25649857

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4732471J01Rik 7 25376819 to 25566417 189598 + antisense lncRNA gene RIKEN cDNA 4732471J01 gene
Cxcl17 7 25400053 to 25412886 12833 - protein coding gene chemokine (C-X-C motif) ligand 17
Tssr2143 7 25412797 to 25412802 5 - TSS region transcription start site region 2143
Tssr71243 7 25412807 to 25412816 9 - TSS region transcription start site region 71243
Tssr71244 7 25412832 to 25412841 9 - TSS region transcription start site region 71244
Tssr71245 7 25412845 to 25412856 11 - TSS region transcription start site region 71245
Tssr71246 7 25412857 to 25412885 28 - TSS region transcription start site region 71246
Tssr71247 7 25412902 to 25412913 11 - TSS region transcription start site region 71247
Tssr2144 7 25412947 to 25412950 3 - TSS region transcription start site region 2144
Tssr2145 7 25412965 to 25412974 9 - TSS region transcription start site region 2145
Tssr2146 7 25412983 to 25412987 4 - TSS region transcription start site region 2146
Tssr2147 7 25413026 to 25413032 6 - TSS region transcription start site region 2147
Gm5587 7 25419153 to 25419826 673 - pseudogene predicted gene 5587
Gm20949 7 25421841 to 25422792 951 - pseudogene predicted gene, 20949
Cpgi18604 7 25422719 to 25423150 431 CpG island CpG island 18604
Tssr2148 7 25427409 to 25427420 11 + TSS region transcription start site region 2148
Tssr65127 7 25431729 to 25431734 5 + TSS region transcription start site region 65127
Tssr65128 7 25433677 to 25433688 11 + TSS region transcription start site region 65128
Gm15495 7 25442155 to 25443463 1308 - pseudogene predicted gene 15495
Tssr65129 7 25452089 to 25452118 29 + TSS region transcription start site region 65129
Ceacam1 7 25461707 to 25477603 15896 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 1
Tssr65130 7 25463447 to 25463470 23 + TSS region transcription start site region 65130
Tssr71248 7 25463482 to 25463517 35 - TSS region transcription start site region 71248
D7Mit23a 7 25463525 to 25463757 232 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 23a
Tssr65131 7 25463652 to 25463666 14 + TSS region transcription start site region 65131
Tssr65132 7 25463676 to 25463698 22 + TSS region transcription start site region 65132
Tssr71249 7 25463700 to 25463718 18 - TSS region transcription start site region 71249
Tssr71250 7 25463719 to 25463729 10 - TSS region transcription start site region 71250
Tssr71251 7 25464265 to 25464268 3 - TSS region transcription start site region 71251
Tssr71252 7 25466345 to 25466356 11 - TSS region transcription start site region 71252
Tssr71253 7 25466357 to 25466383 26 - TSS region transcription start site region 71253
Tssr71254 7 25466399 to 25466422 23 - TSS region transcription start site region 71254
Tssr71255 7 25471822 to 25471828 6 - TSS region transcription start site region 71255
Tssr65133 7 25471878 to 25471891 13 + TSS region transcription start site region 65133
Tssr71256 7 25471920 to 25471971 51 - TSS region transcription start site region 71256
Tssr71257 7 25471973 to 25471997 24 - TSS region transcription start site region 71257
Tssr65134 7 25471980 to 25471987 7 + TSS region transcription start site region 65134
Tssr71258 7 25472020 to 25472023 3 - TSS region transcription start site region 71258
Tssr65135 7 25474747 to 25474773 26 + TSS region transcription start site region 65135
Tssr65136 7 25476385 to 25476402 17 + TSS region transcription start site region 65136
Tssr71259 7 25476406 to 25476426 20 - TSS region transcription start site region 71259
Tssr71260 7 25476483 to 25476500 17 - TSS region transcription start site region 71260
Tssr71261 7 25476552 to 25476563 11 - TSS region transcription start site region 71261
Tssr71262 7 25476566 to 25476590 24 - TSS region transcription start site region 71262
Tssr71263 7 25476642 to 25476654 12 - TSS region transcription start site region 71263
Tssr71264 7 25476696 to 25476701 5 - TSS region transcription start site region 71264
Tssr71265 7 25477582 to 25477594 12 - TSS region transcription start site region 71265
Tssr71266 7 25477597 to 25477602 5 - TSS region transcription start site region 71266
Tssr71267 7 25477607 to 25477634 27 - TSS region transcription start site region 71267
Gm38967 7 25483186 to 25486853 3667 - lncRNA gene predicted gene, 38967
Ceacam2 7 25516042 to 25539857 23815 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 2
Tssr2149 7 25517677 to 25517687 10 - TSS region transcription start site region 2149
D7Mit23b 7 25517826 to 25518042 216 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 23b
D7Dcr2 7 25517906 to 25518003 97 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 2
Tssr71268 7 25537070 to 25537086 16 - TSS region transcription start site region 71268
Tssr71269 7 25539804 to 25539815 11 - TSS region transcription start site region 71269
Tssr71270 7 25539822 to 25539829 7 - TSS region transcription start site region 71270
Tssr71271 7 25539845 to 25539858 13 - TSS region transcription start site region 71271
Tssr71272 7 25539915 to 25539933 18 - TSS region transcription start site region 71272
Tssr71273 7 25539950 to 25539955 5 - TSS region transcription start site region 71273
Gm29918 7 25577074 to 25577798 724 - lincRNA gene predicted gene, 29918
Gm38569 7 25584224 to 25594776 10552 + lincRNA gene predicted gene, 38569
Tssr65137 7 25601285 to 25601294 9 + TSS region transcription start site region 65137
Gm4607 7 25601326 to 25601902 576 + pseudogene predicted gene 4607
Cpgi18605 7 25601375 to 25601546 171 CpG island CpG island 18605
Erich4 7 25614621 to 25615892 1271 - protein coding gene glutamate rich 4
Tssr71274 7 25615807 to 25615814 7 - TSS region transcription start site region 71274
Tssr71275 7 25615835 to 25615859 24 - TSS region transcription start site region 71275
Tssr71276 7 25615874 to 25615886 12 - TSS region transcription start site region 71276
D7Mit113 7 25616709 to 25616885 176 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 113
Gm38969 7 25618668 to 25619524 856 - lncRNA gene predicted gene, 38969
Cpgi18606 7 25619059 to 25619761 702 CpG island CpG island 18606
Tssr65138 7 25619404 to 25619446 42 + TSS region transcription start site region 65138
Dmac2 7 25619414 to 25625550 6136 + protein coding gene distal membrane arm assembly complex 2
Tssr65139 7 25627154 to 25627168 14 + TSS region transcription start site region 65139
Tssr65140 7 25627181 to 25627196 15 + TSS region transcription start site region 65140
Cpgi18607 7 25627335 to 25627540 205 CpG island CpG island 18607
B3gnt8 7 25627588 to 25629492 1904 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
Tssr65141 7 25627604 to 25627652 48 + TSS region transcription start site region 65141
Bckdha 7 25629852 to 25658785 28933 - protein coding gene branched chain ketoacid dehydrogenase E1, alpha polypeptide
Cpgi18608 7 25633163 to 25633384 221 CpG island CpG island 18608
Tssr65142 7 25644897 to 25644900 3 + TSS region transcription start site region 65142